| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,626,802 | T→C | G297G (GGT→GGC) | radA → | DNA recombination protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,626,802 | 0 | T | C | 90.9% | 94.0 / 2.2 | 44 | G297G (GGT→GGC) | radA | DNA recombination protein |
| Reads supporting (aligned to +/- strand): ref base T (1/3); new base C (18/22); total (19/25) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.22e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.83e-02 | |||||||||||
CATGGTGGGGCACGTAACCAAAGATGGTTCGCTGGCTGGCCCGAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGCGATGAAGTGACCTCCGGTAGCTCA‑GTG‑ATGGTGGTATGGGAAGGAACGCGTCCACTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAACCCACGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGTGTTGCACCGTCACGGTGGTCTGCAAATGGCCGATCAGGATGTGTTTGTGAACGTGGTCGGCGGCGTGAAGGTAACCGAAACCAGTGCCGACTTAGCGTTACT > NC_000913/4626559‑4627044 | cATGGTGGGGCACGTAACCAAAGATGGTTCGCTGGCTGGCCCGAATGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGACGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCTCGGCGATGAAGTGACCTCCGGTAGCTCA‑g < 1:113502/251‑1 (MQ=255) ggttggacACGTAACCAAAGATGGCTCGCTGGCGGGCCCTAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGGCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTCC‑GTg < 1:164634/243‑1 (MQ=255) gttggacACGTAACCAAAGATGGCTCGCTGGCGGGCCCTAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTCC‑GTG‑At < 1:318914/245‑1 (MQ=255) ggggcgggcctttaaGTTCTGGAACACTGTATCGTCTGTTCGGTGCGTTTGCATGGCGATGGCGACTCCCGTTTTCGCACTGTACTCAGCCATAAAAACCGATTCTGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCGTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGAACTCCGGCAGCTCC‑GTG‑ATGGTGGGGTGGTAAGGAAcgagttcgtt < 2:305858/238‑9 (MQ=255) cccgaagggccTGGACCACTGTAGCGCCTGTTCGGTGCTTTGGGATGGCGTTGCCGGCTCCCTTTTTTGGACGTGGCGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGCGATGAAGTGACCTCCGGTAGCTCA‑GTG‑ATGGTGGTATGGGAAGGAACGCGTCCACTGCtggtgg < 2:115983/241‑1 (MQ=255) cTGGAACACTGAATCGACTGTTCGGTGCTTTTGGCTGGCGATGCCGACTCCCGTATTCGCACTGTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGTCGTCTTCGCGCCGACAGCACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGACGTGACCTCCGGCAGCTCC‑GGG‑ATGGTGGTGTGGGAGGGTACGCGTcagcagctggtgtcgttcatggc > 2:65750/1‑229 (MQ=255) ggAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTCC‑GTG‑ATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGgcgc > 1:227917/1‑251 (MQ=255) acTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCGGCCATAAAAACCGATTCGGCTCGGTGAATGCGATGGGCGTCTTCGCGATGACCGCACAGAGGCTGCGTGACGTCATCAACCCTTCGGCCATTTTCTTCCGTCTCGGCGATGAAGTGACATCCGGCAGCTCC‑ATA‑ATGGTGGTGTGGGAAGGAACGCACACGTTGCTGGTGGAGATTCAGGCGCAGGTc > 2:301528/1‑251 (MQ=255) tCGACTGTTCGGTGCTTTTGGCTGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGTGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCTATTTTCTTAAGTCGCGGCGATGCATTGACCTCCGGCAGCTAC‑GTG‑ATGGTGGAGTGGGAAGGAACGCAGCCGGTGCTGGGGGAGATTCAGgcgggggccgagcat > 2:17380/1‑239 (MQ=255) cGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTCC‑GTG‑ATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCAc < 1:212567/250‑1 (MQ=255) cTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAACAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGGTGAAGTGACCTCCGGCAG‑ACACGTG‑ATGGTGGTGTGGGAAGGGACGCGACCGTTGCTGGGGGAGATGCAGGAGCTGGTAGATAACTCgg > 2:314535/1‑250 (MQ=255) cGGTGCTTTTGGATGGCGGTGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCGTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTCC‑GTG‑ATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCgatgat < 2:198132/250‑1 (MQ=255) ggTGCTTTTGGATGTGGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCTCTTCTGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAGCAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGGCCTCTGGCAGTTCC‑GTG‑ATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGTTGGTCGATCACTCGatgatgt < 1:33599/251‑2 (MQ=255) ggTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTCC‑GTG‑ATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATgg > 1:3608/1‑251 (MQ=255) ggCGGTGCCGACTCCCGTTTGCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTGTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTCC‑GTG‑ATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGcgccg < 2:179219/251‑1 (MQ=255) ggCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTCC‑GTG‑ATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGcgccg > 1:300843/1‑251 (MQ=255) cGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTCC‑GTG‑ATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGc > 1:218609/1‑249 (MQ=255) cTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGACTGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGCAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTCC‑GTG‑ATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGCATCCGCGCCGCGTGGCAGTgg > 1:169965/1‑251 (MQ=255) cTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGATGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTAC‑GTG‑ATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGAGCCGCGTGGCAgggg > 1:37820/1‑248 (MQ=255) ggacgttacgcgtccatgaatgacGCTTCGGCGCGGTGAATTAGCCGGGCGTCCGCGCGATGTCCGTGCAGGGGCTGCGGGAAGTCATCAACTCATCGGCATTTTTCTTCTGTCGCGGAGATGAAGTGACCTCCGGCTGGTC‑‑GTGGATGTTGGTGTTGGAAGGGGCGCGTCCGTTGCTGGGTGAGATTCAGGCGCTGGTCGATCACTCGATTATTGCGAATCCGCTCCGCGTGGCAGTGGGGCTGGAACaa < 1:22350/228‑1 (MQ=255) taccctgccagaaaacgcGCTTCGGCGCGGTGAATGAGCTGTGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTGCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTCC‑GTG‑ATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACGCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCg < 2:218609/233‑1 (MQ=255) aGCCATAAAAACCGCTTCGGCGCGGTGAATGCGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGGGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGAAGATGAAGTGACCTCCGGCAGCTCC‑GTG‑ATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGc < 2:47472/251‑1 (MQ=255) aTAAAAACCGCTTCGGCGAGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCTTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTCC‑GTG‑ATGGTGGTGTGGGAAGGAACGCGCCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATc < 1:224787/251‑1 (MQ=255) tAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTCC‑GTG‑ATGGTGGTGTGGGAAGGAACGCGGCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGAGGGCGACTCCGCGCCGCGTGGCGGTGGGGCTGGAACAAAACCGTCTGGCAATcc > 2:326363/1‑251 (MQ=255) tCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTCA‑GTG‑ATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCtgt < 1:202647/250‑1 (MQ=255) cgcgGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTTGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTCC‑GTG‑ATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGAGTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGAAATCCTGCTGGCTGTCTTGc < 2:263840/251‑1 (MQ=255) ggTGAATGAGCTGGGCGTCTTCTCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTGCTGAAGTCGCGGAGATGAAGTGACCTCCGGCTGTTCC‑GTG‑ATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGTTGGCTGTCTTGCAcc < 2:275427/251‑1 (MQ=255) aaTGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTCC‑GTG‑ATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGTCTTGCACCGTCa < 1:287635/251‑1 (MQ=255) aTGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTCC‑GTG‑ATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGTCTTGCACCGTCAc > 1:168623/1‑251 (MQ=255) tGGGCGTCTTCGCGATAACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGACGCGGAGATGAAGAGACCTCCGGCAGCTCC‑GTG‑ATGGAGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGGGATTAAGGCGCTGGGCGATCACTCGATGATGGCGAATCCGAGCCGCGTGGCAGTGGGGCTGGACCAAAACCGTCTGGACATCCTGATGGCTGTCTTGACCCGTCACggtgt > 2:334276/1‑249 (MQ=255) gTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGGCGCGGAGATGAAGTGACCTCCGGCAGTTCC‑GTG‑ATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGTCTTGCACCGTCACGGTGGTCTGCa < 1:260807/251‑1 (MQ=255) aCCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCGCT‑GTG‑ATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGTCAATCCTGCTGGCTGTCTTGCTCCGTCACGGTGGTCTGCAAATGGCCGTTCa < 1:136213/251‑1 (MQ=255) aCAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTCC‑GTG‑ATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGTCTTGCACCGTCACGGTGGTCTGCAAATGGCCGATCAGGAtg > 1:77316/1‑251 (MQ=255) ggCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTCC‑GTG‑ATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGTCTTGCACCGTCACGGTGGTCTGCAAATGGCCGATCAGGATGTGttt < 1:201249/251‑1 (MQ=255) gCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTCC‑GTG‑ATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGTCTTGCACCGTCACGGTGGTCTGCAAATGGCCGATCAGGATGTGTTtgtg < 1:326363/250‑1 (MQ=255) gCAATTTTCTTAAGTCGCGGAGATGAAGTGCCCTCCGGCATCTCC‑GTG‑ATGGTGGTGTGGGAAGGAACGCGTCCGTTTCTGGTGGAGATTCAGGCTCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGTGGCTGGACCAAAACCGTCTGGCAATCCTGCTGGCTGTCTTGCACCGTCACGGTGGTCTGCAAATGGCCGATCAGGATGTGTTTGTGAACGTGGTCGGCGGCGTGAAGGt < 1:14319/251‑1 (MQ=255) ttttCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTCC‑GTG‑ATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGGATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGTCTTGCACCGTCACGGTGGTCTGAAAATGGCCGATCAGGATGTGTTTGTGAACGTGGTCGGCGGCGTGAAGGTAAcc > 1:163267/1‑251 (MQ=255) aGTCGCGGAGATGAAGTGACCGCCGGCAGCTCC‑GTG‑ATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCgat < 1:5687/101‑1 (MQ=255) aGTCGCAGAGATGAGGAGACCTCCGGCAGCTCC‑GTG‑ATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCgat > 2:5687/1‑101 (MQ=255) ggcgATGAAGTGACCTCCGGTAGCTCA‑GTG‑ATGGTGGTATGGGAAGGAACGCGTCCACTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAACCCACGCCGCGTGGCAGTgggg < 2:16246/126‑1 (MQ=255) ggcgATGAAGTGACCTCCGGTAGCTCA‑GTG‑ATGGTGGTATGGGAAGGAACGCGTCCACTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAACCCACGCCGCGTGGCAGTgggg > 1:16246/1‑126 (MQ=255) gAAGTGACCTACGGCAGCTCC‑GTG‑ATGGTTGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAAGCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCGGGCAATCCTGCTGGCTGTCTTGCACCGTCACGGTGGTCTGCAAATGGCCGATCAGGATGTGTTTGTGAACGTGGTCGGCGGCGTGAAGGTAACCGAAACCAGCGCCGACTTAGc < 2:168623/251‑1 (MQ=255) gTGACCTCCGGCAGCTCC‑GTG‑ATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGTCTTGCACCGTCACGGTGGTCTGCAAATGGCCGATCAGGATGTGTTTGTGAACGTGGTCGGCGGCGTGAAGGTAACCGAAACCAGCGCCGACTTAGCGtt > 1:129337/1‑251 (MQ=255) aCCTCCGGCAGCTCC‑GTG‑ATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGTCTTGCACCGTCACGGTGGTCTGCAAATGGCCGATCAGGATGTGTTTGTGAACGTGGTCGGCGGCGTGAAGGTAACCGAAACCAGCGCCGACTTAGCGTTAct > 1:24155/1‑251 (MQ=255) | CATGGTGGGGCACGTAACCAAAGATGGTTCGCTGGCTGGCCCGAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGCGATGAAGTGACCTCCGGTAGCTCA‑GTG‑ATGGTGGTATGGGAAGGAACGCGTCCACTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAACCCACGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGTGTTGCACCGTCACGGTGGTCTGCAAATGGCCGATCAGGATGTGTTTGTGAACGTGGTCGGCGGCGTGAAGGTAACCGAAACCAGTGCCGACTTAGCGTTACT > NC_000913/4626559‑4627044 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |