Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,626,670 C→T T253T (ACC→ACT radA → DNA recombination protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,626,6700CT94.6% 98.6 / NA 38T253T (ACC→ACTradADNA recombination protein
Reads supporting (aligned to +/- strand):  ref base C (0/1);  major base T (20/15);  minor base G (0/2);  total (20/18)
Fisher's exact test for biased strand distribution p-value = 2.04e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.52e-01

AATTGACTCGATCCAGGTGATGCATATGGCGGATGTACAGTCATCGCCTGGTAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATTTGACACGCTTCGCCAAAACGCGCGGTGTGGCGATTGTCATGGTGGGGCACGTAACCAAAGATGGTTCGCTGGCTGGCCCGAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGCGATGAAGTGACCTCCGGTAGCTCAGTGATGGTGGTATGGGAAGGAACGCGTCCACTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAACCCACGCCGCGTGGCAGTGG  >  NC_000913/4626436‑4626905
                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                            
cagtgtctctaTCCAGGTTAGGCATATGGCGGGTGTGCAGTCATGGCCTGGCAGCGGGGCGCAGGTGCGTGAAACGGTTGCGTATCTGACGCGCTTCGCCAAAACGCGCTGTGTGGCGAAGTGCATGGTTGGACACGTACCCAAGGATGGCTCGCTGGCTGGCTCTAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGAGGGTGATTCCGACTCCCGTTTTCGCACTTTACGCTGTCATaaa                                                                                                                                                                                                                               <  2:235600/240‑1 (MQ=255)
         gcaccaggtagtGCATATGTCGGATGTCCAGTCTTCGCCGGGCAGCGGGGCGCAGGTTTGGGAACCGGCGGCTTATCTGACGCGCTGCGCCAAAACGCGCGTTGTGGCGATTGTCATGGTTGTACACGTATCCAAAGATGGCTAGCTGGCGGTCCCTAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCGTTTGGATGTCGATGCCGACTCCCGTTTGCTCACTTTACGCAGCCATAAAAACCGTTTCg                                                                                                                                                                                                                     <  2:377895/240‑1 (MQ=255)
                 tGATGCATATGGCGGATGTACAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGCTTCGCCAAAACGCGCGGTGTGGCGATTGTCATGGTTGGACACGTAACCAAAGATGGCTCGCTGGCGGGCCCTAAAGTGCTGGAACACTGTATCGGCTGTTCGGTGCTTTTGGGTGGCGATGCCCACTCCCGTTTTCGCACTTTACGCAACCATAAAAACCGCTTCGGCGCGGTg                                                                                                                                                                                                             >  1:174780/1‑251 (MQ=255)
                            gCGGATGTACAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGCTTCGCCAAAACGCGCGGTGTGGCGATTGTCATGGTTGGACACGTAACCAAAGATGGCTCGCTGGCGGGCCCTAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTggg                                                                                                                                                                                                  <  1:226019/251‑1 (MQ=255)
                              ggATGTTCTGTCACCGCCTGGCTGCTTGGGGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGCTTCGCCAAAACGCGCGGGGTGGCGATTGTCATGGTTGGACACGTAACCAAAGATGGCTCGCTGGCGGGCCCTAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCg                                                                                                                                                                                                <  2:361604/251‑1 (MQ=255)
                                    aCAGTCATCGCCTGGCAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGCTTCGCCAAAACGCACGGTGTGGCGATTGTCATGGTTGGACACGTAACCAAAGATGGCTCGCTGGCGGGCCCTAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTcg                                                                                                                                                                                          <  1:315239/251‑1 (MQ=255)
                                                 ggcaGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATCTGACGCGCTTCGCCAAAACGCGCGGTGTGGCGATTGTCATGGTTGGACACGTAACCAAAGATGGCTCGCTGGCGGGCCCTAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACa                                                                                                                                                                             <  1:165117/248‑1 (MQ=255)
                                                                           ggcggcTTATCTGACGCGCTTCGCCAAAACGCGCGGTGTGGAGATTGTCATGGTTGGACACGTAACCAAAGATGGCTCGCTGGCGGGCCCTAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCtt                                                                                                                                                   >  1:301318/1‑251 (MQ=255)
                                                                                     ctGACGCGCTTCGCCAAAACGCGCGGTGTGGCGATTGTCATGGTTGGACACGTACCCAAAGATGGATCGCTGGCGGGCCCTAAAGTTCTGGAACACTGAATCGACTGTTCGGTGCTTTTGGGTGGCGATACCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCAATTCGGCGCGGTGAAAGAGCCAGGCGTCTTAGCGATGACCGAACAGGGGGTGGGGGAAATCCGCACCCCTTCAGCAAtttt                                                                                                                                         >  2:362152/2‑251 (MQ=255)
                                                                                       gacgcGCTTCGCCAAAACGCGCGGTGTGGCGATTGTCATGGTTGGACACGTAACCAAAGATGGCTCGCTGGCGGGCCCTAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCt                                                                                                                                       >  1:53149/5‑251 (MQ=255)
                                                                                               tCGCCAAAACTCGCGTTGTTGCGATTGTCATGGTTGGATACGTAACCAAATATGGCTTGCTTGGGGGCCCTAAATTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGTCTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCTGCGCGGTGAATGAGCTGGTCGGCTTCGCGATGACCGAACAGGGGCTGCGTTAAGTCAGTAACCCTTCGGCAATTTTCTTAAGTcg                                                                                                                                <  2:334434/250‑1 (MQ=255)
                                                                                                        cgcgcgGTGTGGCGATTGTCATGGTTGGACACGTAACCAAAGATGGCTCGCTGGCGGGCCCTAAAGTGCTGGAACACTGTATCGCCTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGa                                                                                                                       >  1:214383/1‑250 (MQ=255)
                                                                                                              gtgtGGCGATTGTCATGGTTGGACACGTAACCAAAGATGGCTCGCTGGCGGGCCCTAAAGTGCTGGAACACTGTATCGCCTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGAAGATGAAGTGAcc                                                                                                                >  1:47472/1‑251 (MQ=255)
                                                                                                                  ggCGATTGTCATGGTTGGACATGTAACCAAAGATGGCACGCTGGTGGGCCCGAAAGTGCAGGAACACTTGATCGACTGTGCGGTTCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACGTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGAGTCTTCGCGATGACCGAACAGGGGATGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGTAGTTACCtac                                                                                                             <  2:171989/250‑3 (MQ=255)
                                                                                                                            cATGGTGGGGCACGTAACCAAAGATGGTTCGCTGGCTGGCCCGAATGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGACGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCTCGGCGATGAAGTGACCTCCGGTAGCTCAg                                                                                                  <  1:113502/251‑1 (MQ=255)
                                                                                                                               ggttggacACGTAACCAAAGATGGCTCGCTGGCGGGCCCTAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGGCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTCCGTg                                                                                                <  1:164634/243‑1 (MQ=255)
                                                                                                                                gttggacACGTAACCAAAGATGGCTCGCTGGCGGGCCCTAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTCCGTGAt                                                                                              <  1:318914/245‑1 (MQ=255)
                                                                                                                                      cACGTCACCAAAGATGGCTCGCTGGCGGGCCCTAAAGGGCTGGAACAATGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGCCTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGACCAGGGGCTGCGTGGCGTCAGCAACCCTTCGGCAAGTTTCTTAAAGCTGGGAGATGAAGTGACCACCggccgccccgtgatgggggt                                                                                         >  2:278325/1‑233 (MQ=255)
                                                                                                                                       aCGTAACCAAAGATGGCTCGCTGGCGGGCCCTAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATg                                                                                                                        >  1:372751/1‑219 (MQ=255)
                                                                                                                                         gTAACCAAAGATGGCTCGCTGGCGGGCCCTAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGGCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCggcaactccgtgttggaggtgtg                                                                                      >  1:252221/1‑230 (MQ=255)
                                                                                                                                                           ggggcgggcctttaaGTTCTGGAACACTGTATCGTCTGTTCGGTGCGTTTGCATGGCGATGGCGACTCCCGTTTTCGCACTGTACTCAGCCATAAAAACCGATTCTGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCGTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGAACTCCGGCAGCTCCGTGATGGTGGGGTGGTAAGGAAcgagttcgtt                                                                   <  2:305858/238‑9 (MQ=255)
                                                                                                                                                                   cccgaagggccTGGACCACTGTAGCGCCTGTTCGGTGCTTTGGGATGGCGTTGCCGGCTCCCTTTTTTGGACGTGGCGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGCGATGAAGTGACCTCCGGTAGCTCAGTGATGGTGGTATGGGAAGGAACGCGTCCACTGCtggtgg                                                           <  2:115983/241‑1 (MQ=255)
                                                                                                                                                                      taaaGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTTAAGTCAGCAACCCTTCg                                                                                                                                                 <  2:351670/162‑1 (MQ=255)
                                                                                                                                                                      taaaGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCg                                                                                                                                                 >  1:351670/2‑163 (MQ=255)
                                                                                                                                                                             cTGGAACACTGAATCGACTGTTCGGTGCTTTTGGCTGGCGATGCCGACTCCCGTATTCGCACTGTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGTCGTCTTCGCGCCGACAGCACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGACGTGACCTCCGGCAGCTCCGGGATGGTGGTGTGGGAGGGTACGCGTcagcagctggtgtcgttcatggc                                                 >  2:65750/1‑229 (MQ=255)
                                                                                                                                                                               ggAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTCCGTGATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGgcgc                                               >  1:227917/1‑251 (MQ=255)
                                                                                                                                                                                    acTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCGGCCATAAAAACCGATTCGGCTCGGTGAATGCGATGGGCGTCTTCGCGATGACCGCACAGAGGCTGCGTGACGTCATCAACCCTTCGGCCATTTTCTTCCGTCTCGGCGATGAAGTGACATCCGGCAGCTCCATAATGGTGGTGTGGGAAGGAACGCACACGTTGCTGGTGGAGATTCAGGCGCAGGTc                                          >  2:301528/1‑251 (MQ=255)
                                                                                                                                                                                          tCGACTGTTCGGTGCTTTTGGCTGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGTGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCTATTTTCTTAAGTCGCGGCGATGCATTGACCTCCGGCAGCTACGTGATGGTGGAGTGGGAAGGAACGCAGCCGGTGCTGGGGGAGATTCAGgcgggggccgagcat                                    >  2:17380/1‑239 (MQ=255)
                                                                                                                                                                                           cGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTCCGTGATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCAc                                    <  1:212567/250‑1 (MQ=255)
                                                                                                                                                                                              cTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAACAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGGTGAAGTGACCTCCGGCAGACACGTGATGGTGGTGTGGGAAGGGACGCGACCGTTGCTGGGGGAGATGCAGGAGCTGGTAGATAACTCgg                                >  2:314535/1‑250 (MQ=255)
                                                                                                                                                                                                   cGGTGCTTTTGGATGGCGGTGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCGTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTCCGTGATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCgatgat                            <  2:198132/250‑1 (MQ=255)
                                                                                                                                                                                                    ggTGCTTTTGGATGTGGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCTCTTCTGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAGCAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGGCCTCTGGCAGTTCCGTGATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGTTGGTCGATCACTCGatgatgt                          <  1:33599/251‑2 (MQ=255)
                                                                                                                                                                                                    ggTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTCCGTGATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATgg                          >  1:3608/1‑251 (MQ=255)
                                                                                                                                                                                                                 ggCGGTGCCGACTCCCGTTTGCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTGTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTCCGTGATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGcgccg             <  2:179219/251‑1 (MQ=255)
                                                                                                                                                                                                                 ggCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTCCGTGATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGcgccg             >  1:300843/1‑251 (MQ=255)
                                                                                                                                                                                                                         cGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTCCGTGATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGc       >  1:218609/1‑249 (MQ=255)
                                                                                                                                                                                                                            cTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGACTGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGCAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTCCGTGATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGCATCCGCGCCGCGTGGCAGTgg  >  1:169965/1‑251 (MQ=255)
                                                                                                                                                                                                                            cTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGATGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTACGTGATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGAGCCGCGTGGCAgggg  >  1:37820/1‑248 (MQ=255)
                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                            
AATTGACTCGATCCAGGTGATGCATATGGCGGATGTACAGTCATCGCCTGGTAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATTTGACACGCTTCGCCAAAACGCGCGGTGTGGCGATTGTCATGGTGGGGCACGTAACCAAAGATGGTTCGCTGGCTGGCCCGAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGCGATGAAGTGACCTCCGGTAGCTCAGTGATGGTGGTATGGGAAGGAACGCGTCCACTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAACCCACGCCGCGTGGCAGTGG  >  NC_000913/4626436‑4626905

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: