| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,624,055 | T→C | E21E (GAA→GAG) | lplA ← | lipoate‑‑protein ligase A |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,624,055 | 0 | T | C | 94.4% | 100.6 / ‑2.6 | 37 | E21E (GAA→GAG) | lplA | lipoate‑‑protein ligase A |
| Reads supporting (aligned to +/- strand): ref base T (0/2); new base C (13/21); total (14/23) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.25e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.27e-01 | |||||||||||
AGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGG‑TTAACAGGAAGGGCGATTGCTGCCAGCGGGTGCGTTTACCCTGTAGCAGC‑GTGCGGGTCAGCACTACACCGATTGCCAGTGAGAGCAGCAACATCAGGCGT > NC_000913/4623817‑4624295 | ggatggTTTTATCGTCCCCAGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACCCCGCGCCGCCACCGCTACTGCGCCGTGCCATGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAAGCACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATCTGGCGAAAAATACACTCCTCCACCGCCAgg < 2:10600/246‑1 (MQ=255) gctggTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGTGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATCACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCACTGCGTGGCGGGGCTCTGGCGGAAAATAAACTCCTCCACCGCCAGGt > 2:5825/5‑251 (MQ=255) aTCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGTGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATCACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATCTGGCGAAAAATACACTCCTCCACCGCCAGGTTAAACCACg > 1:241110/1‑251 (MQ=255) cGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGTGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATCACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATCTGGCGAAAAATACACTCCTCCACCGCCAGGTTAAACCACGGGTCGTAag < 1:9489/251‑1 (MQ=255) aaGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGTGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATCACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATCTGGCGAAAAATACACTCCTCCACCGCCAGGTTAAACCAAGGGTCGTAAGAGTCAGAGATGAGc > 1:167809/1‑249 (MQ=255) aaGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTACACCGCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGATGAGCAg < 1:162065/251‑1 (MQ=255) aGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGTGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATCACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATCTGGCGAAAAATACACTCCTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGAGGAGCAGGCGTAAt < 1:77052/251‑1 (MQ=255) gTATTGCCGAGATCGTGGAACCCCGCGCCGCCACCGCTACTGCGCCGTGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATCACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATCTGGCGAAAAATACACTCCTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGa < 1:61293/251‑1 (MQ=255) cgctccgccACCGCTACTGCGCCGTGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATCACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATCTGGCGAAAAATACACTCCACCACCGCCAGGTTAAACCACGGGTCGTCAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTACTTTCTTgt > 1:263212/5‑249 (MQ=255) cgccgcCACCGCTACTGCGCCGTGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATCACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATCTGGCGAAAAATACACTCCTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTgtagta < 1:319074/251‑1 (MQ=255) aCCGCTACTGCGCCGTGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATCACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATCTGGCGAAAAATACACTCCTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTc < 1:242157/251‑1 (MQ=255) cGCTACTGCGCCGTGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATCACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATCTGGCGAAAAATACACTCCTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACTATTTCCTTTCTTGTAGTAATGGGTCAc < 1:298445/251‑1 (MQ=255) cGCTACTGCGCCGTGACAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATCACTACCGTGTCGGCATTGCGCCAGAGACACAGAACGCGCTGCGTGGCGGGCCTCTGGCGCAAAATACACTCCTCCACCGCCAGGTTAAACCACGGGTCGTAAGGGTCAGAGATGTGCAGGCGTAATGTGGACATAAAGATTTCCTTTTTTGTTGTAATTGGTCAc > 2:26266/1‑251 (MQ=255) cgtgccAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATCACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATCTGGCGCAAAATACACTCCTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTGGTAATGGGTCACTCTTTTTtctc > 1:214738/4‑251 (MQ=255) gtgccAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATCACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATCTGGCGAAAAATACACTCCTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCGTGTAGTAATGGGTCACTCTTTTTTCTCg < 1:117509/249‑1 (MQ=255) aGGCGGATGTTTACTTCTTCCCACCTCCGGGTATTACCCCCTTTACACGGGTTCTGCGCTCGACCAATTACTACCGTGTCGGCATTGCGCCAGCGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTATTAATGGGTCACCCTTTTTTCTCGCttt < 2:72714/250‑1 (MQ=255) ggACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATCACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATCTGGCGAAAAATACACTCCTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTtcttcc < 1:5825/251‑1 (MQ=255) aaccgccgGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATCACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATCTGGCGAAAAATACACTCCTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACa < 2:307027/179‑1 (MQ=255) aTCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATCACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATCTGGCGAAAAATACACTCCTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACa > 1:307027/1‑181 (MQ=255) gccgGGTATTTCAATCTGTCCCCGGGTTCGGCGCGCGACCAATCACTCCCGTGTCGGCATGGCGCCCGAGAAACAGAACGCGCTGCGTGGCGGGCATCTGGCGAAAAATACACTCCTCCTCCGCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGTCATAACGATTTCCTTTCTTGTAGTAATGGGTCTCTCTTTTTTCTCGCTTTCTTCCTCATCCGGCACCGGTTTGCTg < 2:25167/251‑1 (MQ=255) aTTACACTCTTACCACGGGTTATGCGCGCGCCCAATCACTACCTTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCTTCTGGAGAAAAACACAATCCTCCACCGCCCGGGTAAACCACAGGTCAGAAAAAACAGAGAAACGCACGCGTAATATGGAACTAAAGATTTCATTTTTTGTAGGTATGGGACACTCTTTTTTCTCGCCTTCTTCATCATACGGACCCGGTTTGCTGGCGG‑t > 2:246161/1‑249 (MQ=255) cACGGGTTCTGCGCGCGACCAATCACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATCTGGCGAAAAATACACTCCGCCACCGCCAGGTTAAACCACGGGTCGTAAGATTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGG‑TTAACAGGAAGGGCGa < 1:29831/251‑1 (MQ=255) gTTCTGCACGAGACCAATCACTACAGTGTCGCCATAGCGACAGCGAAACAGAACGCGCTACGTGGCCGGCATCTGGCGAAAAATACACTCATCCCACGACGGGGTACACCCCGGGAAGTAAGAGAAAGACATGAGCAGGCGAAATGTAGAAATACCGCATTCCTTTCTTGACGTAATAGGTCACTCTTTTTTCTCGCTTTCTTCCTCTTTCGGCACCAGTATGCTGGCGG‑tatacaagacaggagaatttg > 2:332829/1‑231 (MQ=255) ggccAATCACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATCTGGCGAAAAATACACTCCTCCACAGCCAGGTTAAACCACGGGGCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTTTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGGTGGCGGATTAACAG‑AAGGGGGATTGTTGCCAGgggggg > 2:130340/3‑249 (MQ=255) aCCAATCACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATCTGGCGAAAAATACACTCCTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAAt > 2:127105/1‑165 (MQ=255) aCCAATCACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATCTGGCGAAAAATACACTCCTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAAt < 1:127105/165‑1 (MQ=255) cGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATCTGGCGAAAAATACACTCCTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGG‑TTTACAGGGAGGGCGCTTTCTACCAGCGGGGACGTTTACCCTTTagaagc > 1:350562/1‑251 (MQ=255) gcCATAGAAACAGAACGCGCTGCGTTGCGTGCATCTGGCGAAAAATACACTCCTCCCCCGCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGTCATAACGAGTTCCTTGCTTGTAGTAATGGGTCACGTTTTTTTCTCGCTTTCTTCCTCGTCCGGCTCCGGTTTGCTGGCGG‑TTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGC‑GTGCGGGTc < 1:346677/251‑1 (MQ=255) gAACGCGCTGCGTGGCGGGCATCTGGCGAAAAATACACTCCTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGG‑TTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGC‑GTGCGGGTCAGCACTACGCCg < 1:62461/251‑1 (MQ=255) actcgcTGCGGGGCGGGCATATGGCGAAAAATACACTCCGCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTGCTCGCGTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGG‑TTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGC‑GTGCGGGTCAGCACTACGCCGAt < 1:371455/248‑1 (MQ=255) gCGTGGCGGGCATCTGGCGAAAAATACACTCCTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGG‑TTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGC‑GTGCGGGTCAGCACTACGCCGATTGCCa < 1:236874/249‑1 (MQ=255) cGGGCATCTGGCGAAAAATACACTCCTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGG‑TTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGC‑GTGCGGGGCAGCACTACGCCGGTTGCCCGTGAAagc > 1:136968/1‑251 (MQ=255) ggCATCTGGCGAAAAATACACTCCTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGG‑TTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGC‑GTGCGGGTCAGCACTACGCCGATTGCCAGTGAAagcag < 1:294826/251‑1 (MQ=255) aaaaaTACACTCCTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGG‑TTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGC‑GTGCGGGTCAGCACTACGCCGATTGCCAGTGAAAGCAGCAACATCAGGc < 1:24036/251‑1 (MQ=255) aaaaaTACACTCCTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGACGAGCAGCCGTAATGTGGACATAACGATTTCCTTTCTTGAAGTCATGGGTCACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGG‑TTAAAAGGGAGGGCGATTGCTTCCCACGGGCACGCTTACCCTGTACCAACAGTG‑GGGACAGCACTATGCCGAATGCCACTGAAagcagacaaaaacggc > 1:178749/1‑240 (MQ=255) aaaaTACACTCCTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGG‑TTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGC‑GTGCGGGTCAGCACTACGCCGATTGCCAGTGAAAGCAGCAACATCAGGCg < 1:103993/251‑1 (MQ=255) aaaTACACTCCTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGG‑TTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGC‑GTGCGGGTCAGCACTACGCCGATTGCCAGTGAAAGCAGCAACATCAGGCGt < 1:295635/251‑1 (MQ=255) | AGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTGGACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGG‑TTAACAGGAAGGGCGATTGCTGCCAGCGGGTGCGTTTACCCTGTAGCAGC‑GTGCGGGTCAGCACTACACCGATTGCCAGTGAGAGCAGCAACATCAGGCGT > NC_000913/4623817‑4624295 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |