| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,617,631 | T→G | V103V (GTT→GTG) | deoC → | deoxyribose‑phosphate aldolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,617,631 | 0 | T | G | 96.3% | 75.7 / ‑2.5 | 27 | coding (309/780 nt) | deoC | deoxyribose‑phosphate aldolase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base G (12/14); minor base . (0/1); total (12/15) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.46e-01 | |||||||||||
ACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGG‑TCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACTCTGAAAGAGCAGGGCACCCCGGAAATCCGTATCGCTACGGTAACCAACTTCCCACACGGTAACGACGACATCGACATCGCGCTGGCAGAAACCCGTGCGGCAATCGCCTACGGTGCTGATGAAGTTGACGTTGTGTTCCCGTACCGCGCGCTGATGGCGGGTAACGAGCAGGTTGGTTTTGAC‑CTGGTGAAAGCCTGTAAAGAGGCTTGCGCGGCAGCGAATGTACTGCTG‑AAAGTGATCATCGAAACCGGCGAACTGAAAGACGAAGCGCTGATCCGTAAAGCGTCTGAAATCTCCATCAAAGCGGGTGCGGACTTCATCAAAACCTCTACCGGTAAAGTGGCTGTGAACGCGACGCCGGAAAGCGCGCGCATCAT > NC_000913/4617395‑4617876 | cccGACGATAAAGTAATTGCGCTGTGACATCAGCCCAAACCCCCGG‑TCGCAAATCCCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACACTGAAAGAGCAGGGCACCCCGGAAATCCGTATTGCTACGGTAACCAACGTCCCACACGGTAACGATGACATCGAAATCGCGCTGGCAGAAACCCTTGCGGCAATCGCCTACGGTGCCGATGAAGTTGACGTGGTGTTCCCGTACcg < 1:152271/250‑1 (MQ=255) cgacgaGAAAGTAATTGCTCTGTGTCATCAGGCCAAAACCCCGG‑TCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACACTGAAAGAGCAGGGCACCCCGGAAATCCGTATTGCTACGGTAACCAACTTCCCACACGGTAACGATGACATCGAAATCGCGCTGGCAGAAACCCGTGCGGCAATCGCCTACGGTGCCGATGAAGTTGACGTGGTGTTCCCGTACcgcg > 1:271164/1‑251 (MQ=255) cgaGAAAGTAATTGCTCTGTGTCATCAGGCCAAAACCCCGG‑TCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACACTGAAAGAGCAGGGCACCCCGGAAATCCGTATTGCTACGGTAACCAACTTCCCACACGGTAACGATGACATCGAAATCGCGCTGGCAGAAACCCGTGCGGCAATCGCCTACGGTGCCGATGAAGTTGACGTGGTGTTCCCGTACCgcgcgc > 1:344025/1‑251 (MQ=255) caccagtcAAAACCCCGGGTCGGCAATTCCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACACTGAAAGAGCAGGGCACCCCGGAAATCCGTATTGCTACGGTAACCAACTTCCCACACGGTAACGATGACATCGAAATCGCGCTGGCAGAAACCCGTGCGGCAATCGCCTACGGTGCCGATGAAGTTGACGTGGTGTTCCCGTACCGCGCGCTGATGGCGGGTAACGAGCAggt < 1:262823/244‑1 (MQ=255) ggCAATACCGCCGCTATCTGTATCTATCCTAGATTTCTCCCGTTTGCTCGCAAAACACTGCACGAGCAGGCCCCCCAGGAAATCCGTATTCCTACGGTAACCAACTTCCCACACGGTAACGATGACATCGAAATCGAGCTGGCAGAAACCCGTGCGGCAATCGCCTACGGTGCCGATGCCGTTGACGTGGTGTTCCCGTACCGCGCGCTGCTGGCGGTTTACGCGCAggttcgcttttacctctgcgactc > 2:182439/1‑231 (MQ=255) atcggTATCTAACCTCGCTTTATCCCGCTTGCTCGCAAAACACTGAAAGAGCAGGGCACCCCGGAAAACCGTATTGCTACGGTAACCAACTTCCCACACGGTAACGATGACATCGAAAGCGCGCTGGCAGAAACCCGTGCGGCAATCGCCTACGGTGCCGATGAAGTTGACGTGGTGTTCCCGTACCGCGCGCTGATGGAGGGTAACGAGCAGGTTGGTTTTGAC‑CTGGTGAAAGCCTGTAAAGAGGCTTg < 2:262054/247‑1 (MQ=255) atctatcCTCGCTTTATCCCGATTGCTCGCAAAACACTGAAAGAGCAGGGCACCCCGGAAATCCGTATTGCTACGGTAACCAACTTCCCACACGGTAACGATGACATCGAAATCGCGATGGCAGAAACCCGTGCGGCAATCGCCTACGGTGCCGATGAAGTTGACGTGGTGTTCCCGTACCGCGCGCTGATGGCGGGTGAAGCGCAGGTTGGGTTT‑ACACTGGTGAAAGCCttgtaagaggcgaggcgagg > 2:64970/1‑232 (MQ=255) cGCTTTATCCCGATTGCTCGCAAAACACTGAAAGAGCAGGGCACCCCGGAAATCCGTATTGCTACGGTAACCAACTTCCCACACGGTAACGATGACATCGAAATCGCGCTGGCAGAAACCCGTGCGGCAATCGCCTACGGTGCCGATGAAGTTGACGTGGTGTTCCCGTACCGCGCGCTGATGGCGGGTAACGAGCAGGTTGGTTTTGAC‑CTGGTGAAAGCCTGTAAAGAGGCTTGCGCGGCAGCggaagt > 1:382374/1‑246 (MQ=255) ttATCCCGATTGCTCGCAAAACACTGAAAGAGCAGGGCACCCCGGAAATCCGTATTGCTACGGTAACCAACTTCCCACACGGTAACGATGACATCGAAATCGCGCTGGCAGAAACCCGTGCGGCAATCGCCTACGGTGCCGATGAAGTTGACGTGGTGTTCCCGTACCGCGCGCTGATGGCGGGTAACGAGCAGGTTGGTTTTGAC‑CTGGTGAATGCCTGTAAAGAGGCTTGCGCGGCAGCGAATGTAct < 1:338816/250‑1 (MQ=255) aatgctcgataaccactGAAAGAGCAGGGCACCCCAGAAATCCGTATTGCTACGGTAACCAACTTCCCACACGGGAACGATGACATCGAAAGCGCGCTGGCAGAAACCCGTGCGGCAAGCGCCTACGGTGCCGATGAAGTTGACGTGGTGTTCCCGTACCGCGCGCTGATGGCGGGTAACGAGCAGGTTGGTTTTGAC‑CTGGTGAAAGCCTGTAAAGAGGCTTGCGCGGCATCGAATGTACTGCTG‑AAAga < 2:120141/236‑2 (MQ=255) gCTCGCAAAACACTGAAAGAGCCGGGCACCCCGGAAATCCGTATTGCGACGGTAACCAACTGCCCACACGGTAACGATGACATCGAAATCGCGCTGGCAGAAACCCGTGCGGCAATCGCCTACGGTGCCGATGAAGTTGACGTGGTGTTCCCGTACCGCGCGCTGATGGCGGGTAACGAGCAGGTTGGTTTTGAC‑CTGGTGAAAGCCTGTAAAGAGGCTTGCGCGGCAGCGAATGTACTGCTG‑AAAGTGa < 2:245686/250‑1 (MQ=255) aaaCACTGAAAGAGCAGGGCACCCCGGAAATCCGTAGTGCTACGGTAACCAACTTCCCACACGGTAACGATGACATCGAAATCGCGCTGGCAGAAACCCGTGCGGCAATCGCCTACGGTGCCGATGAAGTTGACGTGGTGTTCCCGTACCGCGCGCTGATGGCGGGTAACGAGCAGGTTGGTTTTGAC‑CTGGTGAAAGCCTGTAAAGAGGCTTGCGCGGCAGCGAATGTACTGCTG‑AAAGTGATCATCGaa < 1:182439/251‑1 (MQ=255) aacactGAAAGAGCAGGGCACCCCGGAAATCCGTATTGCTACGGTAACCAACTTCCCACACGGTAACGATGACATCGAAATCGCGCTGGCAGAAACCCGTGCGGCAATCGCCTACGGTGCCGATGAAGTTGACGTGGTGTTCCCGTACCGCGCGCTGATGGCGGGTAACGAGCAGGTTGGTTTTGAC‑CTGGTGAAAGCCTGTAAAGAGGCTTGCGCGGCAGCGAATGTACTGCTG‑AAAGTGATCATCGaaa < 1:231837/247‑1 (MQ=255) cGGAAATCCGTTTTTCTACGGTAACCAACCTCCCACACGGTTACGAGGACCTCGAAATCGCTCTGGCAGAAACCCGTGCGGCAATCGCCTACGGTGCCGATGAAGTTGACGTGGTGTTCCCGTACCGCGCGCTGATGGCGGGTAACGAGCAGGTTGGTTTTGAC‑CTGGTGAAAGCCTGTAAAGAGGCTTGCGCGGCAGCGAATGTACTGCTG‑AAAGTGATCATCGAAACCGGCGAACTGAAAGACGAAgcg < 1:263416/251‑1 (MQ=255) aaTCCGTATTGCTACGGTAACCAACTTCCCACACGGTAACGATGACATCGAAATCGCGCTGGCAGAAACCCGTGCGGCAATCGCCTACGGTGCCGATGAAGTTGACGTGGTGTTCCCGTACCGCGCGCTGATGGCGGGTAAAGAGCAGGCTGGTTTTGAC‑CTGGGGAAAGCCTGTAAAGAGGCTTGCGCGGCCGCGCATGTACTGATG‑GAAGGGAACATCGAAACCGGCGCACTggaacacgcacggctg > 1:367953/1‑235 (MQ=255) aTCCGTATTGCTACGGTAACCAACTTCCCACACGGTAACGATGACATCGAAATCGCGCTGGCAGAAACCCGTGCGGCAATCGCCTACGGTGCCGATGAAGTTGACGTGGTGTTCCCGTACCGCGCGCTGATGGCGGGTAACGAGCAGGTTGGTTTTGAC‑CTGGTGAAAGCCTGTAAAGAGGCTTGCGCGGCAGCGAATGTACTGCTG‑AAAGTGATCATCGAAACCGGCGAACTGAAAGACGAAGCGCTGAt < 1:211004/251‑1 (MQ=255) ccgtactgcgtcGGTAACCAACTTCCCACACGGTAATGATGACATCGAAATCGCGCTGGCAGAAACACTTGCGGCAATCTCCTGCTGTTCCGATGAAGTTGACGTGGTGTTGCCGTACCGCGCGCTGATGGCGGGTAACGAGCAGGGTGGTGTTGGC‑CTGGTGAAAGCCTGTAAAGAGGCTTGCGCGGCAGCGAATGTACTGGTG‑AAAGTGATCATCGAAACCGGCGAACTGAAAGGCGAATCGCTGATcc < 2:293604/240‑1 (MQ=255) cTTCCCACACGGTAACGATGACATCGAAATCGCGCTGGCAGAAACCCGTGCGGCAATCGCCTACGGTGCCGATGAAGTTGACGTGGTGTTCCCGTACCGCGCGCTGATGGCGGGTAACGAGCAGGTTGGTTTTGAC‑CTGGTGAAAGCCTGTAAAGAGGCTTGCGCGGCAGCGAATGTACTGCTG‑AAAGTGATCATCGAAAACGGCGCACTGAAAGACGAAACGCTGATCCGTAAAGCGACTGAAATCTcc > 1:53209/1‑250 (MQ=255) ccACACGGTAACGATGACATCGAAATCGCGCTGGCAGAAACCCGTGCGGCAATCGCCTACGGTGCCGATGAAGTTGACGTGGTGTTCCCGTACCGCGCGCTGATGGCGGGTAACGAGCAGGTTGGTTTTGAA‑CTGGTGAAAGCCTGTAAAGAGGCTTGCGCGGGCGCGAATGTACTGCTG‑AAAGAGGTCATCGGAAACGGCGAAATGAAAAACGAAGCGCTGATCCGGAAAGCGGCTGAAATCTCCCTCa > 1:239719/1‑250 (MQ=255) cgatgacatcgaaatcGCGCTGGCAGAAACCCGTGCGGCAATCGCCTACGGTGCCGATGAAGTTGACGTGGTGTTCCCGTACCGCGCGCTGATGGCGGGTAACGAGCAGGGTGGGTTTGAA‑CTGGTGAAAGCCTGTAAAGAGGCTTGCGCGGCAGCGAATGGACTGCTG‑AAAGTGATCATCGAAACCGGCGAACTGAAAGACGAAGCGCTGATCCGTAAAGCGTATGAAATCTCCATCAAAGCGGGGGCgg > 1:72879/5‑251 (MQ=255) atcgaaatcgCGCTGGCAGAAACCCGTGCGGCAATCGCCTACGGTGCCGATGAAGTTGACGTGGTGTTCCCGTACCGCGCGCTGATGGCGGGTAACGAGCAGGTTGGTTTTGAC‑CTGGTGAAAGCCTGTAAAGAGGCTTGCGCGGCAGCGAATGTACTGCTGCAAAG‑GGTCATCGAAACCGGCGCACTGAAAAACGAAGCGCTGATCCGTAAAGCGTCTGAAATCTCACTCCACGCGGGTGAGGACTtcat > 1:257366/1‑251 (MQ=255) aaCCCGTGCGGCAATCGCCTACGGTGCCGATGAAGTTGACGTGGTGTTCCCGTACCGCGCGCTGATGGCGGGTAACGAGCAGGTTGGTTTTGGC‑CTGGTGAAAGCCTGTAAAGAGGCTTGCGCGGCCGAGAATGTACTGCTG‑AAAGTGATCATCGGAACCGGAGAACTGAAAGACGAAGCGCTGGTCCGTAAAACGTCTGAAATCTCCCTCAAAACGGGTGCGGACTTCATCAAAACCCCTACCCGTaaa > 1:96097/1‑250 (MQ=255) ggCGGCAAGCGCCTGCGGGTCCGATGAAGTTGACGTGTTGTTCCCGGACCGCGCGCAGATGGCGGGTAACGAGCAGGTTGGTTTTGAC‑CTGGTGAAAGCCTGTAAAGAGGCTTGCGCGGCAGCGCATGTACTGCTG‑AAAGTGATCATCGAAACCGGCGAACTGAAAGACGAAGCGCTGATCCTTAAAGCGTCTGAAATCTCCATCAAAGCGTGTGCGGACTTCATCAAAACCTCTTCCGGTAAAGTGGCtg < 2:175052/250‑1 (MQ=255) aaTCGCCTACGGTGCCGATGAAGTTGACGT‑GTGTTCCCGTACCGCGCGCTGATGGCGGGTAACGAGCAGGTTGGTTTTGAC‑CTGGTGAAAGCCTGTAAAGAGGCTTGCGCGGCAGCGAATGTACTGCTG‑AAAGTGATCATCGAAACCGGCGAACTGAAAGACGAAgc < 1:48977/167‑1 (MQ=255) tACGGTGCCGATGAAGTTGACGTGGTGTTCCCGTACCGCGCGCTGATGGCGGGTAACGAGCAGGTTGGTTTTGAC‑CTGGTGAAAGCCTGTAAAGAGGCTTGCGCGGCAGCGAATGTACTGCTG‑GAAGTGATCATCGAAACCGGCGAACTGAAAGACGAAGCGCTGATCCGTAAAGCGTCTGAAATCTCCCTCCAAGCGGGGGCGGACTTCATCAAAACCTCTACCGGTAAAGTGGCTGTGAACGCgccgcc > 1:354218/1‑251 (MQ=255) gACGTGGTGTTCCCGTACCGCGCGCTGATGGCGGGTAACGAGCAGGTTGGTTTTGAC‑CTGGTGAAAGCCTGTAAAGAGGCTTGCGCGGCAGCGAATGTACTGCTG‑AAAGTGATCATCGAAACCGGCGAACTGAAAGACGAAGCGCTGATCCGTAAAGCGTCTGAAATCTCCATCAAAGCGGGTGCGGACTTCATCAAAACCTCTACCGGTAAAGTGGCTGTGAACGCGACGCCGGAAAGCGCGCGcatcat < 1:227430/251‑1 (MQ=255) gACGTGGTGGTCCCGTACCGAGCGGTGATGGCGGGTAACGAGCAGTGTGGTTTTGAC‑CTGGTGAAAGCCTGTAAAGAGGCTTGCGCGGCAGCGAATGTACTGCTG‑AAAGTGATCATCGAAACCGGCGAACTGAAAGACGAAGCGCTGATCCGTAAAGCGTCTGAAATCTCCATCAAAGCGGGTGCGGACTTCATCAAAACCTCTACCGGTAAAGTGGCTGTGAACGCGACTCCGGAAAGCGCGCGcatcat < 2:239719/251‑1 (MQ=255) | ACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGG‑TCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACTCTGAAAGAGCAGGGCACCCCGGAAATCCGTATCGCTACGGTAACCAACTTCCCACACGGTAACGACGACATCGACATCGCGCTGGCAGAAACCCGTGCGGCAATCGCCTACGGTGCTGATGAAGTTGACGTTGTGTTCCCGTACCGCGCGCTGATGGCGGGTAACGAGCAGGTTGGTTTTGAC‑CTGGTGAAAGCCTGTAAAGAGGCTTGCGCGGCAGCGAATGTACTGCTG‑AAAGTGATCATCGAAACCGGCGAACTGAAAGACGAAGCGCTGATCCGTAAAGCGTCTGAAATCTCCATCAAAGCGGGTGCGGACTTCATCAAAACCTCTACCGGTAAAGTGGCTGTGAACGCGACGCCGGAAAGCGCGCGCATCAT > NC_000913/4617395‑4617876 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |