| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,614,170 | C→T | F230F (TTC→TTT) | yjjV → | putative metal‑dependent hydrolase YjjV |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,614,170 | 0 | C | T | 88.2% | 77.8 / 0.9 | 34 | F230F (TTC→TTT) | yjjV | putative metal‑dependent hydrolase YjjV |
| Reads supporting (aligned to +/- strand): ref base C (2/2); new base T (16/14); total (18/16) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ACCGCGCACTGGCGTGGTTCACGGTTTTTCCGGCAGCCTGCAACAGGCCGAACGGTTTGTACAGCTGGGCTACAAAATTGGCGTAGGCGGTACTATCACCTATCCACGCGCCAGTAAAACCCGCGATGTCATCGCAAAATTACCGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGC > NC_000913/4613930‑4614414 | aCCGCGCCCTGGCGTGGTTCACGGCTTTTCCGGCAGCCTGCAACAGGCCCAACGGTTGGTACAGCTTGGTTACAAAATTGGCGTAGGCGGTACTATCACCTATCCCCGCGCCAGTAAAACCCGCGATGTCATCGCAAAATTCCCGCTGGCCTCGTTATTGCTGGAAACCGGCGCGCCGGATATGCCGCTCAACGGTTTGCAGGGGCAGGCTAACCGCCCGGAGCAGGCTGCCCGTGCGTTTGCCGTGCtt < 2:155089/250‑1 (MQ=255) cgcgcatgggCGTGGTTCACGGTTTTTCCGGCACCCTGCAACAGGCCGAACGGTTTGTACAGCTGGGCTACAAAATTGGCGTAGGCGGTACTATCACCTATCCACGCGCCAGTAAAACCCGCGATGTCATCGCAAAATTACCGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCTCGTGTGTTCGCCGTGCTTTGc < 2:359524/243‑1 (MQ=255) gTTCACGGTTTTTCCGGCAGCCTGCAACAGGCCGAACGGTTTGTACAGCTGGGCTACAAAATTGGCGTAGGCGGTACTATCACCTATCCACGCGCCAGTAAAACCCGCGATGTCATCGCAAAATTACCGCTGGCATCGTTATTGCTGGAAACCGACTCGCCGGATATTCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGGACACGCCGGCCGGTTGTTTGCCGATCTTTGCGAGTTGCCCCgggg > 2:166585/1‑250 (MQ=255) gTTCAAGGTTTTGCCGGAAGCCTGCAAAAGGCCGAACGGTTTGTACAGCTGGGCTACAAAATTGGCGTAGGCGGTACTATCACCTATCCACGCGCCAGTAAAACCCGCGATGTCATCGCAAAATTACCGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGGTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTTGCCGTGCTTTGCGAGTTGCGCCggg > 1:280349/1‑250 (MQ=255) ccGGCAGCCTGCAACAGGCCGAACGGTTTGTACAGCTGGGCTACAAAATTGGCGTAGGCGGTACTATCACCTATCCACGCGCCAGTAAATCCCGCGATGTCATCGCAAAATTACCGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTTGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATgag < 1:160891/251‑1 (MQ=255) ccGGCAGCCTGCAACAGGCCGAACGGTTTGTACAGCTGGGCTACAAAATTGGCGTAGGCGGTACTATCACCTATCCACGCGCCAGTAAAACCCGCGATGTCATCGCAAAATTACCGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTTGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATg > 1:47216/1‑249 (MQ=255) aGCCTGCAACAGGCCGAACGGTTTGTACAGCTGGGCTACAAAATTGGCGTAGGCGGTACTATCACCTATCCACGCGCCAGTAAAACCCGCGATGTCATCGCAAAATTACCGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTTGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTgc > 1:299617/1‑251 (MQ=255) tACAGCTGGGCGACAAAATGGGCGTAGGCGGTACTATCACCTATCCACGCGCCAGTAAATCCCGCGATGTCATCGCAAAATTACCGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCATGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTTGCCGTGCTTTGCTAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGta < 1:247644/250‑1 (MQ=255) aCAAAAGTGGTGTAGGCGGTAATATCCCCTGTCAACGCGCTAGTAAAACCCGTGATGTAATCGCAAAATTACCGCTGGCATCTTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCAGTGTGTTTGCCGTGCTTTGCGAGTTGCGCCGGGAGCCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTaa < 2:251980/250‑1 (MQ=255) atggcggTAGGCGGTACTATGTCCTTACCACGCTAGAGTAAGACCCGCGATGTCATCGCAAAATGACCGCTGGCATCGTTATTGCGGGAAACCGACGCGCCGGATGTGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCGCGTGTGTTTGCCGTGCTTTGAGATTTGCTCCGGGAACCGTTGGATGAGATTGCGCAACCGTTGTTTAATAACACGTATACGTTTTTTAACGGGcc < 2:49408/245‑1 (MQ=255) ggCGTAGGCGGTACTATCACCTATCCACGCGCCAGTAAAACCCGCGATGTCATCGCAAAATTACCGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGGGTGTTTGCCGTGCTTTGCGGGTTGCGCCGGGAACCGGCGGATTGGGTTGCGCAAGCGTTGCTTAATCACAAGTATACGTTGTTTAACGTGCCGt > 1:107137/1‑250 (MQ=255) aGGCGGTACTATCACCTATCCACGCGCCAGTAAATCCCGCGATGTCAGCGCAAAATTACCGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTGCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGTCCGTGTGTTTGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGGGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGcc < 1:50593/250‑1 (MQ=255) cTATCCACGCGCCAGTAAAACCCGCGATGTCATCGCAAAATTACCGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTTGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAAc > 1:179062/1‑223 (MQ=255) tATCCACGCGCCAGTAAAACCCGCGATGTCATCGCAAAATTACCGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTTGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCAGATAAGGCGTTCAcgc > 1:146853/1‑251 (MQ=255) acaagcgcCAGTAAAACCCGCAATGTCATGGCAAAATTACCGCGGGCATCGTTATGGCTGGAAACCGACGCGCCGGATATGCCGCTAAACGGTTTTAAGGGGCAGCTGAACCGACCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCGTTGCGAGTTGCGCCGGGAACCGGCGGATGAGAGTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACTTGCCGTAGGCCGGATAAGGCGTTCAcgccg < 1:43070/246‑1 (MQ=255) aCGCGCCAGTAAAACCCGCGATGTCATCGCAAAATTACCGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTTGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGtt > 1:17230/1‑189 (MQ=255) cgcccaaGTAAAACCCTCGTTGTCATCGCAAAATTACCGCTGGCTGCGTTATTGCTGGAAACCGACTCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTCACCGCCCGGAGCAGGCTGCCCGTGTGTTTGCCTTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAAGAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATc < 1:374245/245‑1 (MQ=255) aTCGCAAAATTACCGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTTGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGa < 1:376992/251‑1 (MQ=255) cGCAAAATTACCGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTTGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATTCCTGATg > 1:6522/1‑251 (MQ=255) cGCAAAATTACCGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTTGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATg > 1:17349/1‑251 (MQ=255) aaaaTTACCGCTGGCATCGTTATTGCTAGAAACCGACGAGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTACCCGCACGGAGCAGGCTGCCCGTGTGTTTGCAGTGCTTTGCTAGTTGCGCCGGGAAACGGCGGATGGGAATGAGACAGCGGTGCTTAATCACCCGTATACGTTGTTTTACGTGCCGTAAGCCGGATATAGCGTGCACACCGAATCAGGCAGATTGCGCACAATGCCTgctgagg > 2:209365/1‑245 (MQ=255) aaTTACCGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTTGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGAt < 1:280635/145‑1 (MQ=255) aCCGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACAGGCGGCTGAGATTGCGCACACGTTGCTTAATAACACGTATAAGTTGTTTAAAGAGCCGTAGGCCGGATAAGACGTTAACGCCGCATCCGGCAGGTGACGGCCACTGCCTGATGCGACGCtt > 2:297702/1‑250 (MQ=255) cATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTTGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCt > 1:118168/1‑251 (MQ=255) cTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTTGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACAAGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCAAGCCGCATCCGGCAGTTGGCGCAAAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCt > 1:264358/1‑250 (MQ=255) cGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGGGCAGGCGGCCCGTGTGTTTGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTGCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTtg < 1:101294/251‑1 (MQ=255) cGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTTGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGGCTTATCATGCCTACAGGTTtg > 1:43526/1‑251 (MQ=255) tttCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTTGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGt < 1:92867/250‑1 (MQ=255) cAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTTGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCAc > 1:143099/1‑251 (MQ=255) cAGGGGCAGCCTAACCGCCCGGAGCAGGCTGACCGTGTGTTTGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCAc < 1:209365/251‑1 (MQ=255) cAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGGGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGGTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGGCTACAGGATTGTGCCGAACAGTAGGCCGGCTAAAGCGTTCAACCCTCATCCGGCatgtggcggac > 2:109782/1‑240 (MQ=25) aGGCTGCCCGTGTGTTTGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGcaca > 1:157219/1‑250 (MQ=255) gCCCGTTTGTTTGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTGGTTTAACGGGCCGTAGGCGGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGcc < 1:223052/250‑1 (MQ=255) gtgtTTGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTTTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGc < 1:355423/250‑1 (MQ=255) | ACCGCGCACTGGCGTGGTTCACGGTTTTTCCGGCAGCCTGCAACAGGCCGAACGGTTTGTACAGCTGGGCTACAAAATTGGCGTAGGCGGTACTATCACCTATCCACGCGCCAGTAAAACCCGCGATGTCATCGCAAAATTACCGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGC > NC_000913/4613930‑4614414 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |