| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,516,110 | C→T | A190T (GCC→ACC) | fecA ← | ferric citrate outer membrane transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,516,110 | 0 | C | T | 96.2% | 143.9 / NA | 55 | A190T (GCC→ACC) | fecA | ferric citrate outer membrane transporter |
| Reads supporting (aligned to +/- strand): ref base C (2/0); major base T (21/30); minor base G (2/0); total (25/30) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.84e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TGGGCTGAGCTGACCTTCCACGCCCGCCTCGATACCAAAGTCCTGCGGAATGGCACGGGTAACAAAGTTCACCACGCCGCCCACGCTCTGCGGTCCGTAACGCACCGCACCACCACCGCGTACCACGTCAATGGCATCCATGTTGCCGAGCGAAACGGGAGCCAGTGAAAGCTGCGGCTGACCGTAAGGGGCGAAGGGGACGGGGATGCCGTCCATCAGGACGGTCGAGCGGCTGGCGAGGCGCGGGTTCAGGCCCCGGATGCCAAAGTTCATCGCCAGGTCGTGGCTGCCGGTGCCGTTGTTTTCCGGCGCGCTGACGCCAGGGATGCGGTTAAGTACCTCACGCATGGTGGTTGCGCCGGTTTTGGCGAAATCCTCACGGCGGATCACG‑TCACGCGCGCCAGCATGTTCAAATACGTCGTTTTCACGCGCATCACCCAGCCAGTCGCCGACCACGGTCAGGGCATCTTCTTTTGGTG > NC_000913/4515874‑4516352 | ggggCTGAGCTGACCTTCCACGCCCGCCTCGATACCAAAGTCCTGCGGAATGGCACGGGTAACAAAGTTCACCACGCCGCCCACGCTCTGCGGTCCGTAACGCACCGCACCACCACCGCGTACCACGTCAATGGCATCCATGTTGCCGAGCGAAACGGGAGCCAGTGAAAGCTGCGGCTGACCGTAAGGGGCGAAGGGGACGGGGATGCCGTCCATCAGGACGGTCGAGCGGCTGGTGAGGCGCGGGTTCa < 1:35748/250‑1 (MQ=255) gggCTGAGCTGACCTTCCACGCCCGCCTCGATACCAAAGTCCTGCGGAATGGCACGGGTAACAAAGTTCACCACGCCGCCCACGCTCTGCGGTCCGTAACGCACCGCACCACCACCGCGTACCACGTCAATGGCATCCATGTTGCCGAGCGAAACGGGAGCCAGTGAAAGCTGCGGCTGACCGTAAGGGGCGAAGGGGACGGGGATGCCGTCCATCAGGACGGTCGAGCGGCTGGTGAGGCGCGGGTTCa < 1:278674/250‑1 (MQ=255) gctgagctgaCCTTCCACGCCCGCCTCGATACCAAAGTCCTGCGGAATGGCACGGGTAACAAAGTTCACCACGCCGCCCACGCTCTGCGGTCCGTAACGCACCGCACCACCACCGCGTACCACGTCAATGGCATCCATGTTGCCGAGCGAAACGGGAGCCAGAGAAAGCTGCGGCTGACCGTAAGGGGCGAAAGGGACGGGGATGCCGTCCCTCAGGACGGTCGAGCGGCTGGTGCGGCGCGCGTTCAGGc > 1:34672/1‑251 (MQ=255) ctgagctgaCCTTCCACGCCCGCCTCGATACCAAAGTCCTGCGGAATGGCACGGGTAACAAAGTTCACCACGCCGCCCACGCTCTGCGGTCCGTAACGCACCGCACCACCACCGCGTACCACGTCAATGGCATCCATGTTGCCGAGCGAAACGGGAGCCAGTGAAAGCTGCGGCTGACCGTAAGGGGCGAAGGGGACGGGGATGCCGTCCATCAGGACGGTCGAGCGGCTGGTGAGGCGCGGGTTCAGGcc > 1:27432/1‑251 (MQ=255) gctgaCCTTCCACGCCCGCCTCGATACCAAAGTCCTGCGGAATGGCACGGGTAACAAAGTTCACAACGCCGCCCACGCTCTGCGGTCCGTAACGCACCGCACCACCACCGCGTACCACGTCAATGGCATCCATGTTGCCGAGCGAAACGGGAGCCAGTGACAGCTGCGGCTGACCGTAAGGGGCGAAGGGGACGGGGATGCCGTCCATCAGGACGGTCGAGCGGCTGGTGCGGCGCGGGGTCAGGCCCCgg > 1:379926/1‑251 (MQ=255) cccttcccccgccgcctctctcccAAAGGCCTGCGGCATGGCACGGGTAACAAAGTTCCCCACGCCGACCACGCTCTGCGGTCCGTAACGCACCGCACCACCACCGCGTACCACGTCAATGGCATCCATGTTGCCGAGCGAAACGGGAGCCAGTGAAAGCTGCGGCTGACCGTATGGGGCGAAGGGGACGGGGAGGCCGTCCATCAGGACGGTCGAGCGGCTGGTGAGGCGCGGGTTCAGGCCCCGGATGc < 2:89280/229‑1 (MQ=255) cctcctcgcccgtcctacacacAAATTCCTGCGGAATGGCACGGGTAACAAAGTTCACCACGCCGCCCACGTGCTGCGGTCCGTAACGCACCGCACCACCACCGCGGACCACGTCAATGGCATCCATGTTGCCGAGAGAAACGGGAGCCAGTGAAAGCTGCGGCTGACCGTAAGGGGCGAAGGGGACGGGGATGCCGTCCATCAGGACGGTCGAGCGGCTGGTGAGGCGCGGGTTCAGGCCCCGGATGCCa < 2:187684/230‑1 (MQ=255) cgcccgccTCGATACCAAAGTCCTGCGGAATGGCACGGGTAACAAAGTTCACCACGCCGCCCACGCTCTGCGGTCCGTAACGCACCGCACCACCACCGCGTACCACGTCAATGGCATCCATGTTGCCGAGCGAAACGGGAGCCAGTGAAAGCTGCGGCTGACCGTAAGGGGCGAAGGGGACGGGGATGCCGTCCATCAGGACGGTCGAGCGGCTGGTGAGGCGCGGGTTCAGGCCCCGGATGCCCAAggtc > 1:275394/1‑248 (MQ=255) gATACCAAAGTCCTGCGGAATGGCACGGGTAACAAAGTTCACCACGCCGCCCACGCTCTGCGGTCCGTAACGCACCGCACCACCACCGCGTACCACGTCAATGGCATCCATGTTGCCGAGCGAAACGGGAGCCAGTGAAAGCTGCGGCTGACCGTAAGGGGCGAAGGGGACGGGGATGCCGTCCATCAGGACGGTCGAGCGGCTGGTGAGGCGCGGGTTCAGGCCCCGGATGCCCAAGTTCATCGCCAggg > 1:129490/1‑250 (MQ=255) aCCAAAGTCCTGCGGAATGGCACGGGTAACAAAGTTCACCACGCCGCCCACGCTCTGCGGTCCGTAACGCACCGCACCACCACCGCGTACCACGTCAATGGCATCCATGTTGCCGAGCGAAACGGGAGCCAGTGAAAGCTGCGGCTGACCGTAAGGGGCGAAGGGGACGGGGATGCCGTCCATCAGGACGGTCGAGCGGCTGGTGAGGCGCGGGTTCAGGCCCCGGATGCCAAAGTTCATCGCCAGGTCgg > 1:222665/1‑250 (MQ=255) cAAAGTCCTGCGGAATGGCACGGGTAACAAAGTTCACCACGCCGCCCACGCTCTGCGGTCCGTAACGCACCGCACCACCACCGCGTACCACGTCAATGGCATCCATGTTGCCGAGCGAAACGGGAGCCAGTGAAAGCTGCGGCTGACCGTAAGGGGCGAAGGGGACGGGGATGCCGTCCATCAGGACGGTCGAGCGGCTGGTGAGGCGCGGGTTCAGGCCCCGGATGCCAAAGTTCATCGCCAGGTCGTgg < 1:329054/251‑1 (MQ=255) aGTCCTGCGGAATGGCACGGGTAACAAAGTTCACCACGCCGCCCACGCTCTGCGGTCCGTAACGCACCGCACCACCACCGCGTACCACGTCAATGGCATCCATGTTGCCGCGCGAAACGTGAGCCAGTGAAAGCTGCGGCTGACCGTAAGGGGCGAAGGGGACGGGGATGCCGACCATCAGGACGGTCGAGCGGCTGGGGCGGCACGGGTTCAAGCCCCCGAAGCCAAAGGTCCTCGCCatggagaggagg > 2:2276/1‑240 (MQ=255) gCGGAATGGCACGGGTAACAAAGTTCACCACGCCGCCCACGCTCTGCGGTCCGTAACGCACCGCACCACCACCGCGTACCACGTCAATGGCATCCATGTTGCCGAGCGAAACGGGAGCCAGTGAAAGCTGCGGCTGACCGTAAGGGGCGAAGGGGACGGGGATGCCGTCCATCAGGACGGTCGAGCGGCTGGCGAGGCGCGGGTTCAGGCCCCGGATGCCAAAGATCATCGCCAGGTCGTGGCTGCCGGTg > 1:9307/1‑251 (MQ=255) ggAATGGCACGGGTAACAAAGTTCACCACGCCGCCCACGCTCTGCGGTCCGTAACGCACCGCACCACCACCGCGTACCACGTCAATGGCATCCATGTTGCCGAGCGAAACGGGAGCCAGTGAAAGCTGCGGCTGACCGTAAGGGGCGAAGGGGACGGGGATGCCGTCCATCAGGACGGTCGAGCGGCTGGTGAGGCGCGGGTTCAGGCCCCGGATGCCAAAGTTCAACGCCAGGTCGTGGCTGCCGGTGcc < 1:319943/251‑1 (MQ=255) aTGGCACGGGGAACAAAGTTCACCACGCCGCCCACGCTCTGCGGTCCGTAACGCACCGCACCACCACCGCGTACCACGTCAAGGGCATCCATGTTGCCGAGCGAAACGGTAGCCAGTGAAAGCGGCGGCTGACCGTAAGGGGCGAAGGGGACGGGGATGCCGTCCATCAGGACGGTCGAGCGGCTGGTGAGGCGCGGGTTCAGGCCTCGGATGCCAAAGTTCATCGCCAGGTCGTGGCTGCCGGTGCCgtt < 1:146705/251‑1 (MQ=255) ggttaCAAATTTCCCCCCGCCCCCCACGCTCTGCGGTCCGTAACGCACCGCACCACCACCGCGTACCACGGCAAGGGCATCCATGTTGCCGAGCGAAACGGGAGCCAGTGAAAGCTGCGGCTGACCGTAAGGGGCGAAGGGGACGGGGATGCCGTCCATCAGGACGGTCGAGCGGCTGGTGAGGGGCGGGTTCAGGCCCCGGATGCCAAAGTTCATCGCCAGGGCGTGGCTGCCGGTGCCGTTGTTTTCCg < 2:225290/247‑1 (MQ=255) aaCAAAGTTCACCACGCCGCCCACGCTCGGCGTTCCGTAACGCCCCGCACCACCACCGCGTACCCCGTCAATGGCTGCCATGTTGCCGGGCGAAACGGGAGCCGCTGAAAGCTGCGGCTGACCTTAAGGGGCGAAGTGGACGGGGATGCCGTCCACCAGGACGGTCGAGCGGCTGGTGAGGCGCGGGTCCAGGCCCCGGATGCCAAAGTTCATCGCCGGGTCGTGGCTGCCGGTGCCGTTGTTTTCCGgcg < 2:160450/251‑1 (MQ=255) tCACCACGCCGCCCACGCTCTGCGGTCCGTAACGCACCGCACCACCACCGCGTACCACGTCAATGGCATCCATGTTGCCGAGCGAAACGGGAGCCAGTGAAAGCTGCGGCTGACCGTAAGGGGCGAAGGGGACGGGGATGCCGTCCATCAGGACGGTCGAGCGGCTGGTGAGGCGCGGGTTCAGGCCCCGGATGCCAAAGTTCATCGCCAGGTCGTGGCTGCCGGTGCCGTTGTTTTCCGGCTCGCTGACg > 1:5252/1‑251 (MQ=255) ccaccacGCCGCCCACGCTCTGCGGTCCGTAACGCACCGCACCACCACCGCGTACCACGTCAATGGCATCCATGTTGCCGAGCGAAACGGGAGCCAGTGAAAGCTGCGGCTGACCGTAAGGGGCGAAGGGGACGGGGATGCCGTCCATCAGGACGGTCGAGCGGCTGGTGAGGCGCGGGTTCAGGCCCCGGATGCCAAAGTTCATCGCCAGGTCGTGGCTGCCGGTGCCGTTGTTTTCCGGCGCGCTGACg < 1:59182/250‑1 (MQ=255) ccacGCCGCCCACGCTCTGCGGTCCGTAACGCACCGCACCACCACCGCGTACCACGTCAATGGCATCCATGTTGCCGAGCTAAACGGGAGCCAGTGAAAGCTGCGGCTGACCGTAAGGGGCGAAGGGGACGGGGATGTCGTCCATCAGGACGGTCGAGCGGCTGGTGAGGCGCGGGTTCAGGCCCCGGATTCCAAAGTTCATCGCCAGGTCGTGGCTGCCGGTGCCGTTGTTTTCCGGCGCGCTGACGCCa < 1:125353/251‑1 (MQ=255) cacGCCGCCCACGCTCTGCGGTCCGTAACGCACCGCACCACCACCGCGTACCACGTCAATGGCATCCATGTTGCCGAGCGAAACGGGAGCCAGTGAAAGCTGCGGCTGACCGTAAGGGGCGAAGGGGACGGGGATGCCGTCCATCAGGACGGTCGAGCGGCTGGTGAGGCGCGGGTTCAGGCCCCGGATGCCAAAGTTCATCGCCAGGTCGTGGCTGCCTGTGCCGTTGTTTTCCGGCGCGCTGACGCCAg < 1:333545/251‑1 (MQ=255) cacGCCGCCCACGCTCTGCGGTCCGTAACGCACCGCACCACCACCGCGTACCACGTCAATGGCATCCATGTTGCCGAGCGAAACGGGAGCCAGTGAAAGCTGCGGCTGACCGTAAGGGGCGAAGGGGACGGGGATGCCGTCCATCAGGACGGTCGAGCGGCTGGTGAGGCGCGGGTTCAGGCCCCGGATGCCAAAGTTCATCGCCAGGTCGTGGCTGCCGGTGCCGTTGTTTTCCGGAGCGCTGACGcc > 1:276060/1‑249 (MQ=255) ccgcctcCCCCGCTCTGCGGGCCGGACCGCCCAGCCCCACCACAGCGTAACACGTCAATGGCATCCTTGGTGCCGCGCGAAACGGGAGCCAGTGAACGCTGCGGCTGCCCGGAAGGGGTGAAGGGGACGGGGATGCCGGCCAGCAGGACGGTCGGGCGGCTGGTGAGTCGCGGGTTCAGGCCCCGGATGCCAAAGTTCATCGCCAGGTCGTGGCTGTCGGTGCCGTTGTTTTCCGGCGCTCTGACGCCAgg < 2:145208/250‑1 (MQ=255) gccCACGCTCCGCGGTCCGTAACGCACCGCACCACCACCGCGTACCACGTCAATGGCATCCATGTTGCCGAGCGAAACGGGAGCCAGTGAAAGCTGCGGCTGACCGTAAGGGGCGAAGGGGACGGGGATGCCGTCCATCAGGACGGTCGAGCGGCTGGTGAGGCGCGGGTTCAGGCCCCGGATGCCAAAGTTCATCGCCAGGTCGTGGCTGCCGGTGCCGTTGTTTTCCGGCGCGCTGACGCCAGGGATGc < 1:327790/251‑1 (MQ=255) cccACGCTCTGCGGTCCGTAACGCACCGCACCACCACCGCGTACCACGTCAATGGCATCCATGTTGCCGAGCGAAACGGGAGCCAGTGAAAGCTGCGGCTGACCGTAAGGGGCGAAGGGGACGGGGATGCCGTCCATCAGGACGGTCGAGCGGCTGGTGAGGCGCGGGTTCAGGCCCCGGATGCCAAAGTTCATCGCCAGGTCGTGGCTGCCGGTGCCGTTGTTTTCCGGCGCGCTGACGCCCGGGATGCg > 1:249019/1‑251 (MQ=255) ccatcgtatggCGGACCGGAACGCCCCGCACCGCCACCGCGTAACACGTCAATGGCTGCCATGTTGCCGAGCGAATCGGGCGCCAGTGAAAGCTGCGGCTGACCGTAAGGGGCGACGGGGACGTGGATGCCGTACAGCAGGACGGTCGAGCGGCTGGTGAGGCGCGGGTTCGGGCCCCGGATGCCAAAGTTCATCGCCAGGTCGTGGCTGCCGGTGCCGTTGTTTTCCGGCGCGCTGACGCTAGGGAGGCg < 2:95831/241‑1 (MQ=255) ccACGCTCTGCGGTCCGTAACGCACCGCACCACCACCGCGTACCACGTCAATGGCATCCATGTTGCCGAGCGAAACGGGAGCCAGTGAAAGCTGCGGCTGACCGTAAGGGGCGAAGGGGACGGGGATGCCGTCCATCAGGACGGTCGAGCGGCTGGTGGGGCGCGGGTTCAGGCCCCGGATGCCAAAGGTACTCGCCAGGTCGTGGCTGCCGGTGCCGTTGTTTTTCGGCGCGCTGGCGCCAGGGATGCgg > 2:176551/1‑251 (MQ=255) gctGCGGGCCGTAACGCTCCGCACCACCACCGCGTACCACGTCAATGGCAGCCATGTTGCCGAGCGAAACGGGCGCCAGTGAAAGCGGCGGCTGACCGTAAGGGGCGAAGGGGACGGGGATGCCGTCCATCAGGACGGTCGAGCGGCTGGTGAGGCGCGGGTTCAGGCCCCGGATGCCAAAGTTCATCGCCAGGTCGTGGCTGCCGGTGCCGTTGTTTTCCGGCGCGCTGACGCCAGGGATGCGGTTAAGt < 2:150545/250‑1 (MQ=255) gttcGTAACGCACCGCACCACCACCGCGTACCACGTCAATGGCATCCATGTTGCCGAGCGAAACGGGAGCCAGTGAAAGCTGCGGCTGACCGTAAGGGGCGAAGGGGACGGGGATGCCGTCCATCAGGACGGTCGAGGGGCTGGTGAGGCGCGGGTTCAGGCCTGGGATGCCAAAGTTCATCGCCAGGTCGTGGCTGCCGGTGCCGTTGTTTTCCGGCGCGCTGACGCCAGGGATGCGGTTAAGTACCTCa < 1:44405/248‑1 (MQ=255) ccGTAACGCACCGCACCACCACCGCGTACCACGTCAATGGCATCCATGTTGCCGAGCGAAACGGGAGCCAGTGAAAGCTGCGGCTGACCGTAAGGGGCGAAGGGGACGGGGATGCCGTCCATCAGGACGGTCGAGCGGCTGGTGAGGCGCGGGTTCAGGCCCCGGATGCCAAAGTTCATCGCCAGGTCGTGGCTGCCGGTGCCGTTGTTTTCCGGCGCGCTGACGCCAGGGATGCGGTTAAGTACCTCACg > 1:329021/1‑251 (MQ=255) cgcaccgcacCACCACCGCGTACCACGTCAATGGCATCCATGTTGCCGAGCGAAACGGGAGCCAGTGAAAGCTGCGGCTGACCGTAAGGGGCGAAGGGGACGGGGATGCCGTCCATCAGGACGGTCGAGCGGCTGGTGAGGCGCGGGTTCAGGCCCCGGATGCCAAAGTTCATCGCCAGGTCGTGGCTGCCGGTGCCGTTGTTTTCCGGCGCGCTGACGCCAGGGATGCGGTTAAGTACCTCACGCAtggt > 1:374723/1‑251 (MQ=255) cAATGGCATCCATGTTGCCGAGCGAAACGGGAGCCAGTGAAAGCTGCGGCTGACCGTAAGGGGCGAAGGGGACGGGGATGCCGTCCATCAGGACGGTCGAGCGGCTGGTGAGGCGCGGGATCAGGCCCCGGGAGCCAAAGTTCATCGCCAGGTCGTGGCTGCCGGTGGCGTTGTTTTCCCGCGCACTGACGCCAGGGATGAGGTTAAGTCCCTCACGCATGGGGGGTGCGCCGGtttttgccaaaaccgc > 2:290175/1‑238 (MQ=255) ggCATCAATGTTGCCGAGCGAAACGGGAGCCAGTGAAAGCTGCGGCTGACCGTAAGGGGCGAAGGGGACGGGGCTGCCGACCATCAGGACGGTAGAGCGGCTGGTGAGGCGCGGGGTCAGGCCCCGGATGCCAAAGTTCATCGCCTGGACGTGGCTGCCGGTGCCGTTGATTTCCGGCGCGCTGACGCCAGGGGTGCCGTTACGGACCTCAAGCCTGGTGGTTGCGCCGGTTTAGGCGGAATCCTCAaggc > 2:287462/1‑251 (MQ=255) gCATCCATGTTGCCGAGCGAAACGGGAGCCAGTGAAAGCTGCGGCTGACCGTAAGGGGCGAAGGGGACGGGGATGCCGTCCATCAGGACGGTCGAGCGGCTGGTGAGGCGCGGGTTCAGGCCCCGGATGCCAAAGTTCATCGCCAGGTCGTGGCTGCCGGTGCCGTTGTTTTCCGGCGCGCTGACGCCAGGGATGCGGTTAAGTACCTCACGCATGGTGGTTGCGCCGGTTTTGGCGAAATCCTCAcggcg < 1:32743/251‑1 (MQ=255) aTCCATGTTGCCGAGCGAAACGGGAGCCAGTGAAAGCTGCGGCTGACCGTAAGGGGCGAAGGGGACGGGGATGCCGTCCATCAGGACGGTCGAGCGGCTGGTGAGGCGCGGGTTCAGGCCCCGGATGCCAAAGTTCATCGCCAGGTCGTGGCTGCCGGTGCCGTTGTTTTCCGGCGCGCTGACGCCAGGGATGCGGTTAAGTACCTCACGCATGGTGGTTGCGCCGGTTTTGGCGAAATCCTCAcggcgg > 1:72409/1‑250 (MQ=255) gTTGCCGAGCGAAACGGGAGCCAGTGAAAGCTGCGGCTGACCGTAAGGGGCGAAGGGGACGGGGATGCCGTCCATCAGGACGGTCGAGCGGCTGGTGAGGCGCGGGTTCAGGCCCCGGATGCCAAAGTTCATCGCCAGGTCGTGGCTGCCGGTGCCGTTGTTTTCCGGCGCGCTGACGCCAGGGATGCGGTTAAGTACCTCACGCATGGTGGTTGCGCCGGTTTTGGCGAAATCCTCACGGCGGAtcacgg > 1:325836/1‑250 (MQ=255) gAGCGAAGCGGGCGCCAGGGAAAGCTGCGGCTGACCGTGAGGGGCGAAGTGGACGGGGATGCCGGCCATCAGGACGGGCGAGCGGCTGGTGAGGCGCGGGTTCATGCCCCGGATGCAAAAGTTCATCGCCAGGTCGTGGCGGCCGTTGTCGTTGTTTTCCTGCGCGCTGACGCCAGGGATGCGGTTAATTACCTCACGCATGGTGGTTGCGCCGGTTTTTGCGAAATCCGCACGGCGGATCACG‑TCTcgcg < 2:59751/251‑1 (MQ=255) cGAAACGGGAGCCAGTGAAAGCTGCGGCTGACCGAAAGGGGCGAAGGGGACGGGGATGCCGTCCATCAGGACGGTCGAGCGGCTGGTGAGGCGCGGGTTCAGGCCCCGGATGCCAAAGTTCATCGCCAGGTCGTGGCTGCCGGTGCCGTTGTTTTCCGGCGCGCTGACGCCAGGGATGCGGTTAAGTACCTCACGCATGGTGGTTGCGCCGGTTTTGGCGAAATCCTCACGGCGGAACAAG‑GCACgcgcgc > 1:110243/1‑251 (MQ=255) cGGGAGCCAGTGAAAGCTGCGGCTGACCGTAAGGGGCGAAGGGGACGGGGATGCCGTCCATCAGGACGGTCGAGCGGCTGGGGAGGCGCGGGCTCAGGCCCCGGATGCCAAAGTTCATCGCCAGGACGCGGCTGCCGGTGCCGGTGGTGTCCGGCGCGCTGACGCCAGGGATGAGGTTAAGTACCTCACGCATGGCGGGTGCGCCGGTTTTGGCGAAATCCTCACGGCGGAacacggtaagggggccagcc > 1:256990/1‑236 (MQ=255) ggAGCCAGTGAAAGCTGCGGCTGACCGTAAGGGGCGAAGGGGACGGGGATGCCGTCCATCAGGACGGTCGAGCGGCCGGTGAGGCGCGGGTTCACGCCCCGGATGCCAAAGTTCATCGCCAGGTCGTGGCTGCCGGTGCCGTTGTTTTCCGGCGCGCTGACGCCAGGGATGCGGTTAAGTACCTCACGCATGGTGGTTGCGCCGGTTTTGGCGCAATCCTCACGACGGACCACGATC‑CCCGCGCCAGCATg > 1:171692/1‑251 (MQ=255) ccgTGAAAGCTGTGGCTGACAGTAAGGGGCGAAGGGGACGGGTATGCCGTCAATCAGTACGGTCGAGCGGCTGGTGAGGCGCGGGGTCAGGCCCCGGATGCCAAAGTTCATCGCCAGGTCGTGGCTGACGGTGCCGTTGTTTTCCGGCGCGCTGACGCCAGGGATGCGGTTAAGTACCTCACGCATGGTGGTTGCGCCGGTTTTGGCGAAATCCTCACGGCGGATCACG‑TCACGCGCGCCAGCATGTTCa < 2:27432/248‑1 (MQ=255) tGAAAGCTGCGGCTGACCGTAAGGGGCGAAGGGGACGGGGATGCCGTCCATCAGGACGGTCGAGCGGCTGGCGAGGCGCGGGTTCAGGCCCCGGATGCCAAAGTTCATCGCCAGGTCGTGGCTGCCGGTGCCGTTGTTTTCCGGCGCGCTGACGCCAGGGATGCGGTTAAGTACCTCACGCATGGTGGTTGCGCCGGTTTTGGCGAAATCCTCACGGCGGATCACG‑TCACGCGCGCCAGCATGTTCAAAt > 1:83014/1‑250 (MQ=255) gCTGCGGCTGACCGTAAGGGGCGAAGGGGACGGGGATGCCGTCCATCAGGACGGTCGAGCGGCTGGTGAGGCGCGGGTTCAGGCCCCGGATGCCAAAGTTCATCGCCAGGTCGTGGCTGCCGGTGCCGTTGTTTTCCGGCGCGCTGACGCCAGGGATGCGGTTAAGTACCTCACGCATGGTGGTTGCGCCGGTTTTGGCGAAATCCTCACGGCGGATCACG‑TCACGCGCGCCAGCATGTTCAAATAcgtcg < 1:363037/251‑1 (MQ=255) gCGGCTGACCGTAAGGGGCGAAGGTGACGGGGATGCCGTCCATCAGGACGGTCGAGCGGCTGGTGAGGCGCGGGTTCAGGCCCCGGATGCCAAAGTTCATCGCCAGGTCGTGGCTGCCGGTGCCGTTGTTTTCCGGCGCGCTGACGCCAGGGATGCGGTTAAGTACCTCACGCATGGTGGTTGCGCCGGTTTTGGCGAAATCCTCACGGCGGATCACG‑TCACGCGCGCCAGCATGTTCAAATACGTCGttt < 1:307212/251‑1 (MQ=255) gACCGTAAGGGGCGAAGGGGACGGGGATGCCGTCCATCAGGACGGTCGAGCGGCTGGTGAGGCGCGGGTTCAGGCCCCGGATGCCAAAGTTCATCGCCAGGTCGTGGCTGCCGGTGCCGTTGTTTTCCGGCGCGCTGACGCCAGGGATGCGGTTAAGTACCTCACGCATGGTGGTTGCGCCGGTTTTGGCGAAATCCTCACGGCGGATCACG‑TCACGCGCGCCAGCATGTTCAAATACGTCGTTTTCAc < 1:220091/249‑1 (MQ=255) atgggCGAAGGGGACGGGGATGCCGTCCATCAGGCCGGTCGAGCGGCTGGTGAGGCGAGGGTTCAGGCCCCGGATGCAAAAGTTAATCGACGGGGCGTGGCTGCCGGTGCCGTTGTTTTCCGGCGCGCTGACGCCAGGGATGCGGGTAAGTACCTCACGCATGGAGGGTGGGCCGGTTTTGGCGGAATACTCCCGGCGGATCACC‑GCACGCGTCCCCGCATGGTTAACAACGACGTTTTCACGCGCATccc > 2:83541/3‑249 (MQ=255) gCGAAGGGGACGGGGATGCCGTCCATCAGGACGGTCGAGCGGCTGGTGAGGCGCGGGTTCAGGCCCCGGATGCCAAAGTTCATCGCCAGGTCGTGGCTGCCGGTGCCGTTGTTTTCCGGCGCGCTGACGCCAGGGATGCGGTTAAGTACCTCACGCATGGTGGTTGCGCCGGTTTTGGCGAAATCCTCACGGCGGATCACG‑TCACGCGCGCCAGCATGTTCAAATACGTCGTTTTCACGCGCATCACccag < 1:188805/251‑1 (MQ=255) ggggACGGGGATGCCGTCCATCAGGACGGTCGAGCGGCTGGTGAGGCGCGGGTTCAGGCCCCGGATGCCAAAGTTCATCGCCAGGTCGTGGCTGCCGGTGCCGTTGTTTTCCGGCGCGCTGACGCCAGGGATGCGGTTAAGTACCTCACGCATGGTGGTTGCGCCGGTTTTGGCGAAATCCTCACGGCGGATCACG‑TCACGCGCGCCAGCATGTTCAAATACGTCGTTTTCACGCGCATCACCCAGCCAGt < 1:274319/251‑1 (MQ=255) gggACGGGGATGCCGTCCATCAGGACGGTCGAGCGGCTGGTGAGGCGCGGGTTCAGGCCCCGGATGCCAAAGTTCATCGCCAGGTCGTGGCTGCCGGTGCCGTTGTTTTCCGGCGCGCTGACGCCAGGGATGCGGTTAAGTACCTCACGCATGGTGGTTGCGCCGGTTTTGGCGAAATCCTCACGGCGGATCACG‑TCACGCGCGCCAGCATGTTCAAATACGTCGTTTTCACGCGCATCACCCAGCCAGTc < 1:103990/251‑1 (MQ=255) gggATGCCGTCCATCAGGACGGTCGAGCGGCTGGTGAGGCGCGGGTTCAGGCCCCGGATGCCAAAGTTCATCGCCAGGTCGTGGCTGCCGGTGCCGTTGTTTTCCGGCGCGCTGACGCCAGGGATGCGGTTAAGTACCTCACGCATGGAGGTTGCGCCGGTTTTGGCGAAATCCTCACGGCGGATCACG‑TCACGCGCGCCAGCATGTTCAAATACGTCGTTTTCACACGCCTCACCCAGCCCGGCGCCGAc > 1:44338/1‑251 (MQ=255) ccGTCCATCAGGGCGGTCGGTGGGCTGGTGAGGCGCGGGTTCAGGTCCCGGATGCCAAATTTCATCGCCAGGTCGTGGCTGCCGGTGCCGTTGTTTTCCGGCGCGCTGACGCCAGGGATGCGGTTAAGTTCCTCACGCATGGTGGTTGCGCCGGTTTTGTCGAAATCCTCACGGCGGATCACG‑TCACGCGCGCCAGCATGTTCAAATACGTCGTTTTCACGCGCATCACCCAGCCAGTCGCCGACCACGGt < 1:123397/251‑1 (MQ=255) aCGGTCGAGCGGCTGGTGAGGCGCGGGTTCAGGCCCCGGATGCCAAAGTTCATCGCCAGGTCGTGGCTGCCGGTGCCGTTGTTTTCCGGCGCGCTGACGCCAGGGATGCGGTTAAGTACCTCACGCATGGTGGTTGCGCCGGTTTTGGCGAAATCCTCACGGCGGATCACG‑TCACGCGCGCCAGCATGTTCAAATACGTCGTTTTCACGCGCATCACCCAGCCAGTCGCCGACCACGGTCAGGGCAtcttc < 1:142108/251‑1 (MQ=255) tcgggCGGCTGGTGAGGCGCGGGTTCCGGCCCCGGATGCCAAAGTTCTGCGCCAGGTCGTGGCGGCCGGTGCCGTTGTTTTCCGGCGCGCTGACGCCAGGGATGCGGTTAAGTACCTCACGCATGGTGGTTGCGCCGGTTTTGGCGAAATCCTCACGGCGGATCACG‑TCACGCGCGCCAGCATGTTCAAAGACGTCGTTTTCACGCGCATCACCCAGCCAGTCGCCGACCACGGTCAGGGCATCTTCttt < 2:289553/246‑1 (MQ=255) gAGCGGCTGGTGAGGCGCGGGTTCAGGCCCCGGATGCCAAAGTTCATCGCCAGGTCGTGGCTGCCGGTGCCGTTGTTTTCCGGCGCGCTGACGCCAGGGATGCGGTTAAGTACCTCACGCATGGTGGTTGCGCCGGTTTTGGCGAAATCCTCACGGCGGATCACG‑TCACGCGCGCCAGCCTGTTCAAATACGTCGTTTTCACGCGCATCACCCAGCCAGTCGCCGACCACGGTCAGGGCCACTTCTTTTgg > 1:6143/1‑251 (MQ=255) gCGGCTGGTGAGGCGCGGGTTCAGGCCCCGGATGCCAAAGTTCATCGCCAGGTCGTGGCTGCCGGTGCCGTTGTTTTCCGGCGCGCTGACGCCAGGGATGCGGTTAAGTACCTCACGCATGGTGGTTGCGCCGGTTTTGGCGAAATCCTCACGGCGGATCACG‑TCACGCGCGCCAGCATGTTCAAATACGTCGTTTTCACGCGCATCACCCAGCCAGTCGCCGACCACGGTCAGGGCATCTTCTTTTGGTg < 1:193003/251‑1 (MQ=255) | TGGGCTGAGCTGACCTTCCACGCCCGCCTCGATACCAAAGTCCTGCGGAATGGCACGGGTAACAAAGTTCACCACGCCGCCCACGCTCTGCGGTCCGTAACGCACCGCACCACCACCGCGTACCACGTCAATGGCATCCATGTTGCCGAGCGAAACGGGAGCCAGTGAAAGCTGCGGCTGACCGTAAGGGGCGAAGGGGACGGGGATGCCGTCCATCAGGACGGTCGAGCGGCTGGCGAGGCGCGGGTTCAGGCCCCGGATGCCAAAGTTCATCGCCAGGTCGTGGCTGCCGGTGCCGTTGTTTTCCGGCGCGCTGACGCCAGGGATGCGGTTAAGTACCTCACGCATGGTGGTTGCGCCGGTTTTGGCGAAATCCTCACGGCGGATCACG‑TCACGCGCGCCAGCATGTTCAAATACGTCGTTTTCACGCGCATCACCCAGCCAGTCGCCGACCACGGTCAGGGCATCTTCTTTTGGTG > NC_000913/4515874‑4516352 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |