| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,513,841 | A→G | R156R (CGT→CGC) | fecB ← | ferric citrate ABC transporter periplasmic binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,513,841 | 0 | A | G | 93.5% | 79.9 / ‑2.4 | 32 | R156R (CGT→CGC) | fecB | ferric citrate ABC transporter periplasmic binding protein |
| Reads supporting (aligned to +/- strand): ref base A (2/0); new base G (14/15); total (17/15) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.84e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.06e-02 | |||||||||||
TGGGCAACCAGCAGCCAGGCAGGATTGACCGCCAGCAGTTGCTCCAGGCCGATGGACGGCATGGACGCACCCGCCATCGCAGCGGGAACGTTCAGCCCCAGAGAGGCCAGCACGCTGCCGGTCCAGGTCTCCTGAGTATGCAGGTTGAATTGCTGTTCGCGTGATGTGCCAAAGGCCACGCGTGTCCCTTTGGGAAGCTGGCTGGCCCACTGCGCCATCCTCTCTTTATGTTGTTCCAGACGTGCCTGCATCTCTCGCTTTTTACCCACCATTTCGCCGATGATAGCCGCAGATTGCAAATTTTCAGCGTAGGTTTCGTTGCGGGACTTAAGCAGCAGTACCGGCGCGATTTGCTGCAAGGCGATGTAAACCCCCGCATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACTGCCACGGTTTCAGG > NC_000913/4513602‑4514078 | ggggCACCCAGCAGCAGGGCAGGATTGACCGCCAGCATTTGCTCCAGGCCGAGGGACGGCATGGACGCACCCGCCATCGCAGCGGGAACGTTCAGCCCCAGAGAGGCCAGCACGCTGCCGGTCCAGGTCTCCTGAGTATGCAGGTTGAATTGCTGTTCGCGTGATGTGCCAAAGGCCACGCGTGTCCCTTTGGGAAGCTGGCTGGCCCACTGCGCCATCCTCTCTTTATGTTGTTCCAGGCGTGCCTGCAt < 1:174423/250‑1 (MQ=255) ttGACCGCCAGCAGTTGCCCCAGGCCGATGGACGGCATGGACGCACCCGCCATCGCAGCGGGAACGTTCAGCCCCAGAGAGGCCAGCACGCTGCCGGTCCAGGTCTCCTGAGTATGCAGGTTGAATTGCTGTTCGCGTGATGTGCCAAAGGCCACGCGTGTCCCTTTGGGAAGCTGGCTGGCCCACTGCGCCATCCTCTCTTTATGTTGTTCCAGGCGTGCCTGCATCTCTCGCTTTTTACCCACCAttt < 1:167334/250‑1 (MQ=255) aCCGCCAGCAGTTGCTCCAGGCCGATGGACGGCATGGACGCACCCGCCATCGCAGCGGGAACGTTCAGCCCCAGAGAGGCCAGCACGCTGCCGGTCCAGGTCTCCTGAGTATGCAGGTTGAATTGCTGTTCGCGTGATGTGCCAAAGGCCACGCGTGTCCCTTTGGGAAGCTGGCTGGCCCACTGCGCCATCCTCTCTTTATGTTGTTCCAGGCGTGCCTGCATCTCTCGCTTTTTACCCACCATTTCGcc < 1:203798/251‑1 (MQ=255) ccGCCAGCAGTTGCTCCAGGCCGATGGACGGCATGGACGCACCCGCCATCGCAGCGGGAACGTTCAGCCCCAGAGAGGCCAGCACGCTGCCGGTCCAGGTCTCCTGAGTATGCAGGTTGAATTGCTGTTCGCGTGATGTGCCAAAGGCCACGCGTGTCCCTTTGGGAAGCTGGCTGGCCCACTGCGCCATCCTCTCTTTATGTTGTTCCAGGCGTGCCTGCATCTCTCGCTTTTTACCCACCATTTCGCCg > 1:116426/1‑251 (MQ=255) ccAGCAGTTGCTCCAGGCCGATGGACGGCATGGACGCACCCGCCATCGCAGCGGGAACGTTCAGCCCCAGAGAGGCCAGCACGCTGCCGGTCCAGGTCTCCTGAGTATGCAGGTTGAATTGCTGTTCGCGTGATGTGCCAAAGGCCACGCGTGTCCCTTTGGGAAGCTGGCTGGCCCACTGCGCCATCCTCTCTTTATGTTGTTCCCGGCGTGCCTGCATCTCTCGCTTTTTACCCACCATTTCGCCgatg > 1:91052/1‑251 (MQ=255) ccAGCAGTTGCTCCAGGCCGATGGACGGCATGGACGCACCCGCCATCGCAGCGGGAACGTTCAGCCCCAGAGAGGCCAGCACGCTGCCGGTCCAGGTCTCCTGAGTATGCAGGTTGAATTGCTGTTCGCGTGATGTGCCAAAGGCCACGCGTGTCCCTTTGGGAAGCTGGCTGGCCCACTGCGCCATCCTCTCTTTATGTTGTTCCAGGCGTGCCTGCATCTCTCGCTTTTTACCCACCATTTCGCCgatg > 1:13380/1‑251 (MQ=255) cagcagTTGCTCCAGGCCGATGGACGGCATGGACGCACCCGCCATCGCAGCGGGAACGTTCAGCCCCAGAGAGGCCAGCACGCTGCCGGTCCAGGTCTCCTGAGTATGCAGGTTGAATTGCTGTTCGCGTGATGTGCCAAAGGCCACGCGTGTCCCTTTGGGAAGCTGGCTGGCCCACTGCGCCATCCTCTCTTTATGTTGTTCCAGGCGTGCCTGCATCTCTCGCTTTTTACCCACCATTTCGCCgatg > 1:16377/1‑250 (MQ=255) gcatttGCCCCAGGCCGATGGACGGCATGGACGCACCCGCCATCGCAGCGGGAACGTTCAGCCCCAGAGAGGCCAGCACGCTGCCGGTCCAGGTCTCCTGAGTATGCAGGTTGAATTGCTGTTCGCGTGATGTGCCAAAGGCCACGCGTGTCCCTTTGGGAAGCTGGCTGGCCCACTGCGCCATCCTCTCTTTATGTTGTTCCAGGCGTGCCTGCATCTCTCGCTTTTTACCCACCATTTCGCCGATGATa < 1:282213/247‑1 (MQ=255) gcagTTGCTCCAGGCCGATGGACGGCATGGACGCACCCGCCATCGCAGCGGGAACGTTCAGCCCCAGAGAGGCCAGCACGCTGCCGGTCCAGGTCTCCTGAGTATGCAGGTTGAATTGCTGTTCGCGTGATGTGCCAAAGGCCACGCGTGTCCCTTTGGGAAGCTGGCTGGCCCACTGCGCCATCCTCTCTTTATGTTGTTCCAGGCGTGCCTGCATCTCTCGCTTTTTACCCACCATTTCGCCgatgat > 1:63176/1‑250 (MQ=255) aGGCCGATGGACGGCCTGGACGCACCCGCCATCGCAGCGGGAACGTTCAGCCCCAGAGAGGCCAGCCCGCTGCCGGTCCAGGTCTCCTGAGTATGCAGGTTGAATTGCTGTTCGCGTGATGTGCCAAAGGCCACGCGTGTCACTTTGTGAAGCTGGCTGGCCCCCTGCTCCATCCTCCCTTTATGTTGTTCCTGTCGTGCCTGCATCTCTCGCTTTTTACCCACCATTTCGCCGATGTTAGCAGCAGATTg > 2:113472/1‑251 (MQ=255) aGGCCGATGGACGGCATGGACGCACCCGCCATCGCAGCGGGAACGTTCAGCCCCAGAGAGGCCAGCACGCTGCCGGTCCAGGTCTCCTGAGTATGCAGGTTGAATTGCTGTTCGCGTGATGTGCCAAAGGCCACGCGTGTCCCTTTGGGAAGCTGGCTGGCCCACTGCGCCATCCTCTCTTTATGTTGTTCCAGGCGTGCCTGCATCTCTCGCTTTTTACCCACCATTTCGCCGATGATAGCCGCAGATTg > 1:31664/1‑251 (MQ=255) ccaggggccggcagggtcgaccccGCCATCGCAGCGGGAACGGTCAGCCCCAGAGAGGCCTGCACGCTGCCGGTCCAGGCCTCCTGAGTATGCAGGTTGAATTGCGGTTCGCTTGATGTGCCAAAGGCCACGCGTGTCCCTTTGGGAAGCGGGCTGGCCCCCTGCGCCTTCCTCTCTTTATGTTGTTCCAGGCGTGCCTGCATCTCTCGCTTTTTACCCACCATTTCGCCGATGATAGCCGCAGATTGCaa < 2:284801/230‑1 (MQ=255) ccGATGGACGGCATGGACGCACCCGCCATCGCAGCGGGAACGTTCAGCCCCAGAGAGGCCAGCACGCTGCCGGTCCAGGTCTCCTGAGTATGCAGGTTGAATTGCTGTTCGCGTGATGTGCCAAAGGCCACGCGTGTCCCTTTGGGAAGCTGGCTGGCCCACTGCGCCATCCTCTCTTTATGTTGTTCCAGGCGTGCCTGCATCTCTCGCTTTTTACCCACCATTTCGCCGATGATAGCCGCAGATTGCa > 1:62335/1‑250 (MQ=255) ggatggCAGGGACGCCCCCGCCATCGCAGCGGGAACGTTCAGCCCCAGAGAGGCCAGCACGCTGCCGGTCCAGGTCTCCTGAGTATGCAGGTTGAATTGCTGTTCGCGTGATGTGCCAAAGGCCACGCGTGTCCCGTTGGGAAGCTGGCTGGCCCACTGCGCCATCCTCTCTTTATGTTGTTCCAGGCGTGCCTGCATCTCTCGCTTTTTACCCACCATTTCGCCGATGATAGCCGCAGATTGCAAAtttt < 1:204491/247‑1 (MQ=255) cGGGAACGTTCAGCCCCAGAGAGGCCAGCACGCTGCCGGTCCAGGGCTCCTGAGTATTCAGGTTGAATTGCTGGTCGCGTGATGTGCCAAAGGCCACGCGTGTCCCTTTGGGAAGCGGGTCGGCCCACTGCGCCAACCTCTTTTTATGTCGTTCCAGGCTGGCCTGCATCTCTCGCTTTTTCCCCACCATTTCGCCGATGATAGCCGCAGATTGCAAATTTTCAGCGTAGGTTTCGTTGCGGGACTTAagc < 1:350804/251‑1 (MQ=255) gagagGCCAGCACGCTGCCGGTCCAGGTCTCCTGAGTATGCAGGTTGAATTGCTGTTCGCGTGATGTGCCAAAGGCCACGCGTGTCCCTTTGGGAAGCTGGCTGGCCCACTGCGCCATCCTCTCTTTATGTTGTTCCAGGCGTGCCTGCATCTCTCGCTTTTTACCCACCATTTCGCCGATGATAGCCGCAGATTGCAAATTTTCAGCGTAGGTTTCGTTGCGGGACTTAAGCAGCAGTACCGGCGCGAtt < 1:79122/251‑1 (MQ=255) gCCAGCACGCTGCCGGTCCAGGTCTCCTGAGTATGCAGGTTGAATTGCTGTTCGCGTGATGTGCCAAAGGCCACGCGTGTCCCTTTGGGAAGCTGGCTGGCCCACTGCGCCATCCTCTCTTTATGTTGTTCCAGGCGTGCCTGCATCTCTCGCTTTTTACCCACCATTTCGCCGATGATAGCCGCAGATTGCAAATTTTCAGCGTAGGTTTCGTTGCGGGACTTAAGCAGCAGTACCGGCGCGATTtgctg > 1:151840/1‑251 (MQ=255) gCTGACGGTCCAGGTCTCCTGAGTATGCAGGTTGAATTGCTGTTCGCGTGATGTGCCAAAGGCCACGCGTGTCCCTTTGGGAAGCTGGCTGGCCCACTGCGCCATCCTCTCTTTATGTCGTTCCAGACGTGCCTGCATCTCTCGCTTTTTACCCACCATTTCGCCGATGATAGCCGCAGATTGCAAATTTTCAGCGTAGGTTTCGTTGCGGGACTTAAGCAGCAGTACCGGCGCGATTTGCTGCAAGGCg > 1:7261/1‑250 (MQ=255) gCCGGTCCAGGTCTCCTGAGTATGCAGGTTGAATTGCTGTTCGCGTGATGTTCCAAAGGCCACGCGTGTCCCTTTGGGAAGCTGGCTGGCCCACTGCGCCATCCTCTCTTTATGTTGTTCCAGGCGTGCCTGCATCTCTCGCTTTTTACCCACCATTTCGCCGATGATAGCCGCAGATTGCAAATTTTCAGCGTAGGTTTCGTTGCGGGACTTAAGCAGCAGTACCGGCGCGATTTGCTGCAAGGCGATg < 1:331468/250‑1 (MQ=255) ccGGTTCAGGTCTCCTGGGTATGTAGGTGGAATTGCTGTTCGGGTGATGTGCCAAAGGCCACGCTTGTCCCTTTTGGAAGCTGGCTGGCCCACTGCGCCTTCCGCGCTTTATGTTGTTCCAGGCGTGCCTGCATCTCTCGCTGTTTACCCACCATTTCGCCGATGATAGCCGCAGATTGCAAATTTTCAGCGTAGGTTTCGTTGCGGGACTTAAGCAGCAGTACCGGCGCGATTTGCTGCAAGGCGATGTa < 2:110937/251‑1 (MQ=255) gTATGCAGGTTGAATTGCTGTTCGCGTGATGTGCCAAAGGCCACGCGTGTCCCTTTGGGAAGCTGGCTGGCCCACTGCGCCATCCTCTCTTTATGTTGTTCCAGGCGTGCCTGCATCTCTCGCTTTTTACCCACCATTTCGCCGATGATAGCCGCAGATTGCAAATTTTCAGCGTAGGTTTCGTTGCGGGACTTAAGCAGCAGTACCGGCGCGATTTGCTGCAAGGCGATGTAAACCCCCGCATGGCGAct < 1:203828/251‑1 (MQ=255) gTTGAATTGCTGTTCGCGTGATGTGCCAAAGGCCACGCGTGTCCCTTTGGGAAGCTGGCTGGCCCACTGCGCCATCCTCTCTTTATGTTGTTCCAGGCGTGCCTGCATCTCTCGCTTTTTACCCACCATTTCGCCGATGATAGCCGCAGATTGCAAATTTTCAGCGTAGGTTTCGTTGCGGGACTTAAGCAGCAGTACCGGCGCGATTTGCTGCAAGGCGATGTAAACCCCCGCATGGCGACTGCTGTCgg > 1:79995/1‑251 (MQ=255) ttGCTGTTCGCGTGATGTGCCAAAGGCCACGCGTGTCCCTTTGGGAAGCTGGCTGGCCCACTGCGCCATCCTCTCTTTATGTTGTTCCAGGCGTGCCTGCATCTCTCGCTTTTTACCCACCATTTCGCCGATGATAGCCGCAGATTGCAAATTTTCAGCGTAGGTTTCGTTGCGGGACTTAAGCAGCAGTACCGGCGCGATTTGCTGCAAGGCGATGTAAACCCCCGCATGGCGACTGCTGTCGGCAATg > 1:145078/1‑250 (MQ=255) cgcgTGATGTGCCAAAGGCCACGCGTGTCCCTTTGGGAAGCTGGCTGGCCCACTGCGCCATCCTCTCTTTATGTTGTTCCAGGCGTGCCTGCATCTCTCGCTTTTTACCCACCATTTCGCCGATGATAGCCGCAGATTGCAAATTTTCAGCGTAGGTTTCGTTGCGGGACTTAAGCAGCAGTACCGGCGCGATTTGCTGCAAGGCGATGTAAACCCCCGCATGGCGACTGCTGTCGGCAATGATCAGGTc < 1:272828/250‑1 (MQ=255) gcttgaattgccaatggctccacgcgtCCTTTTGGGAAGCTGGCCTGCCCACGTCTCCATCCTCTCTTTATTTTTTTCCAGGCGTGCCTGAATCTATCGCGTTTTACCCACCATTTCGCCGATGATAGCCGCAGATTTCAAATTTTCAGCGTATTTTTCGTTGCGGGACTTAATCAGCAGTAGCGGCGCGATTGGCTGCAAGGCGATGTAACCCCCCGCATTGCTACTGCTGTCGGCAATGATCAGGTCTg < 2:357866/226‑1 (MQ=255) tGATGTGCCAAAGGCCACGCGTGTCCCTTTGGGAAGCTGGCTGGCCCACTGCGCCATCCTCTCTTTATGTTGTTCCAGACGTGCCTGCTTCTCTCGCTTTTTACCCACCATTTCGCCGATGATAGCCGCAGATTCCAAATTTTCAGCGTAGGTTTCGTTGCGGGACTTAAGCAGCAGTACCGGCGCGATTTGCTGCAAGGCGATGTAAACCCCCGCATGGCGACTGCTGTCGGCAATGATCAGGTCTGGtt > 1:88355/1‑251 (MQ=255) aaGGCCACGCGTGTCCCTTTGGGAAGCTGGCTGGCCCACTGCGCCATCCTCTCTTTATGTTGTTCCAGGCGTGCCTGCATCTCTCGCTTTTTACCCACCATTTCGCCGATGATAGCCGCAGATTGCAAATTTTCAGCGTAGGTTTCGTTGCGGGACTTAAGCAGCAGTACCGGCGCGATTTGCTGCAAGGCGATGTAAACCCCCGCATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGc > 1:67206/1‑251 (MQ=255) aGGCCACGCGTGTCCCTTTGGGAAGCTGGCTGGCCCACTGCGCCATCCTCTCTTTATGTTGTTCCAGGCGTGCCTGCATCTCTCGCTTTTTACCCACCATTTCGCCGATGATAGCCGCAGATTGCAAATTTTCAGCGTAGGTTTCGTTGCGGGACTTAAGCAGCAGTACCGGCGCGATTTGCTGCAAGGCGATGTAAACCCCCGCATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCa < 1:113472/251‑1 (MQ=255) ccACGCGTGTCCCTTTGGGAAGCTGGCTGGCCCACTGCGCCATCCTCTCTTTATGTTGTTCCAGGCGTGCCTGCATCTCTCGCTTTTTCCCCACCATTTCGCCGATGATAGCCGCCGATTGCCAATTTTCAGCGTAGGTTTCGTTGCAGGACTTAAGCAGCAGTACCGGCGCGATTTGCTGCAAGGCGGTGTAAACCCCCGCATGGCGACTGCTGTCGGCACTGATTCGGTCTGGTTTAGGAGCGGCCATg > 2:321968/1‑251 (MQ=255) tggctggcCCACTGCGCCATCCTCTCTTTATGTTGTTCCAGGCGTGCCTGCATCTCTCGCTTTTTACCCACCATTTCGCCGATGATAGCCGCAGATTGCAAATTTTCAGCGTAGGTTTCGTTGCGGGACTTAAGCAGCAGTACCGGCGCGATTTGCTGCAAGGCGATGTAAACCCCCGCATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTgcgcgcg > 1:260429/1‑251 (MQ=255) actctctTTATTTTGTTCCATGCGTGCCTGCAGCTCTCGCTTTTTTCCCGCCATTTCGCCGATGATAGCCGCAGATTGCAAATTTTCAGCGTAGGTTTCGTTGCGTGACTTAAGCAGCAGTACCGGCGCGATTTGCTGCAAGGCGATGTAAACCCCCGCATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCTTCAATGTCTGCCAGGCTCGTCTGCGCGCGTGTTACGACCGACTGCCAc < 2:361210/249‑1 (MQ=255) tATGTTGTTCCAGGCGTGCCTGCATCTCTCGCTTTTTACCCACCATTTCGCCGATGATAGCCGCAGATTGCAAATTTTCAGCGTAGGTTTCGTTGCGGGACTTAAGCAGCAGTACCGGCGCGATTTGCTGCAAGGCGATGTAAACCCCCGCATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGCTCCAACGGACTGCCACGGTTTCAgg > 1:210848/1‑251 (MQ=255) | TGGGCAACCAGCAGCCAGGCAGGATTGACCGCCAGCAGTTGCTCCAGGCCGATGGACGGCATGGACGCACCCGCCATCGCAGCGGGAACGTTCAGCCCCAGAGAGGCCAGCACGCTGCCGGTCCAGGTCTCCTGAGTATGCAGGTTGAATTGCTGTTCGCGTGATGTGCCAAAGGCCACGCGTGTCCCTTTGGGAAGCTGGCTGGCCCACTGCGCCATCCTCTCTTTATGTTGTTCCAGACGTGCCTGCATCTCTCGCTTTTTACCCACCATTTCGCCGATGATAGCCGCAGATTGCAAATTTTCAGCGTAGGTTTCGTTGCGGGACTTAAGCAGCAGTACCGGCGCGATTTGCTGCAAGGCGATGTAAACCCCCGCATGGCGACTGCTGTCGGCAATGATCAGGTCTGGTTTCAGAGCGGCAATGGCTTCCAGGCTCGGCTGCGCGCGCGTTCCGACGGACTGCCACGGTTTCAGG > NC_000913/4513602‑4514078 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |