| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,445,315 | C→T | P402S (CCC→TCC) | tamB → | translocation and assembly module subunit TamB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,445,315 | 0 | C | T | 95.8% | 133.0 / ‑2.4 | 51 | P402S (CCC→TCC) | tamB | translocation and assembly module subunit TamB |
| Reads supporting (aligned to +/- strand): ref base C (0/2); new base T (21/25); total (22/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.97e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.20e-01 | |||||||||||
GGCGCGCTGCGCGAACAGCTGGAGATTGGCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTT‑TACTGGCCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAGCA‑GGTCAATCTCGACAAACTCACCGTCGCGGCGCTGGAAGGGAAAACTGAACTCAAGGCGTTGCTCGACTGGCAACAGGCCATTAGTTGGCGCGGTGAGCTAACGC‑TTAACGGCATTAACACCGCCA‑AAGAGTTCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCACCTG > NC_000913/4445066‑4445553 | ggcgCGCTGCGCGAACAGCTGGAGATTGGCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTT‑TACTGGCCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATcccgcc < 1:65535/251‑1 (MQ=255) gcgcGAACAGCTGGAGATTGGCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTT‑TACTGGCCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGTCCGCGACt < 1:73106/250‑1 (MQ=255) aaCAGCTGGAGATTGGCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTT‑TACTGGCCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGTCCGCGACTATTAcc < 1:323414/251‑1 (MQ=255) aaCAGCTGGAGATTGGCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTT‑TACTGGCCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGTCCGCGACTATTAcc < 1:99609/251‑1 (MQ=255) atgtGGAAATTGGCGTTAATCGTTCACGTCCGGTGGATAGGGATTTACGCGCCAAGGCGCGACTGGCAGAAGCCGGATTGACGCTCAACGTGGAAGTGATGAGCAAACAACAT‑TACTGGCTGGACACTGGTGAGAAGCAGTATCAGGCGGATGATCTAAAGCTGCAGCTTACCGGCAGAATGACCGATTACACGCTCTCTATGCGTACGGAAGTGAAGGGACAGGAGATCTCGGCCGCGACTATTGcccgc < 2:80703/248‑3 (MQ=255) gCTGGAGATTGTCGTTAAGCTTGCCGGTCCGGTGAATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAATGTGGAAGTGAACAGCAAAAAGCTT‑TACTGGCCGTTCACTGGTGAGAAGCAGTATCAGGCGGATTATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCACTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGTCCGCGACTATTACCCTCg < 2:270965/251‑1 (MQ=255) gCTGGAGATTGGCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTT‑TACTGGCCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGTCCGCGACTATTACCCTCg > 1:178343/1‑251 (MQ=255) agaTTGGCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTT‑TACTGGCCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGTCCGCGACTATTACCCTCGACGcc < 1:87554/251‑1 (MQ=255) cGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTT‑TACTGGCCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGTCCGCGACTATTACCCTCGACGCCAAAGGTa < 1:49733/251‑1 (MQ=255) gtGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAAAAGCTT‑TACTGGCCGTTAACTGGAGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTATCTATGCGTACGGCAGTGGAAGGAAAGGAGATCCCGTCAGCGACTATTAACCTCGACGCCAAAGGTAATGAACAGCA‑GGTCAAtat > 1:151501/1‑249 (MQ=255) ggATATGGATTTACTCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTT‑TACTGGCCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGTCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAGCA‑GGTCAATCTCg < 2:217552/251‑1 (MQ=255) ggATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTT‑TACTGGCCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGTCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAGCA‑GGTCAATCTCGACAAAc < 1:60161/251‑1 (MQ=255) gATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTT‑TACTGGCCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGTCCGCGACTATTACCCTCGAAGCCAAAGGTAATGAACAGCA‑GGTCAATCTCGACAAACt > 1:368790/1‑251 (MQ=255) ttACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTT‑TACTGGCCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGTCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAGCA‑GGTCAATCTCGACAAACTCAc > 1:80089/1‑251 (MQ=255) cccAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTT‑TACTGGCCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGTCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAGCA‑GGTCAATCTCGACAAACTCACCGTcgcg < 1:63465/251‑1 (MQ=255) ccAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTT‑TACTGGCCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGTCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAGCA‑GGTCAATCTCGACAAACTCCCCGTCgcgg > 1:153533/1‑251 (MQ=255) cAGACGCGCCTGGCGGAAGCCGGTTTGCCGCTCAACGTTGAAGTGAACAGCAAACAGCTT‑TACTGGCCGTTCACTTGTGAGAAGCAGTATCAGGCTGATTATCTGAAACTGAAACTTACCGTCAAAATGACCGATGACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGTTCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAGCA‑GGTCAATCTCGACAAACTCACCGTCgcggc < 1:372726/251‑1 (MQ=255) aCGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTT‑TACTGGCCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGTCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAGCA‑GGTCAATCTCGACAAACTCACCGTCGCGGCGCt < 1:14514/251‑1 (MQ=255) cgACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTT‑TACTGGCCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGTCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAGCA‑GGTCAATCTCGACAAACTCACCGTCGCGGCGCTGGa < 1:111889/251‑1 (MQ=255) ggATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTT‑TACTGGCCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAGCA‑GGTCAATCTCGACAAACTCACCGTCGCGGCGCTGGAAGGGAAAACTGAACt < 1:152624/251‑1 (MQ=255) aTTGCCGCTCAACGTGGAAGTGAACAGCACACAGCTT‑TACTGGCCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGCAACTGAAACTTACCGGCAAACTGACCGATTACACGCTCTCTAAGCGTACGGCAGTGAAGGGACAGGAGATCCCGTCCGCGACTATTACCCTAGACGCCTAAGGCAATGAAAAGCA‑GGGCAATCTCGACAAACTGACCGTCGCGGCGCTGGCAGGGAAAACTGAACTc > 1:155320/1‑250 (MQ=255) aTTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTT‑TACTGGCCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGTCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAGCA‑GGTCAATCTCGACAAACTCACCGTCGCGGCGCTGGAAGGGAAAACTGAACTc > 1:92223/1‑250 (MQ=255) tGCCGCTCAACGTGGAAGTGAACAGCAAACAGCGT‑TACTGGCCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGAGCCCGTCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAGCA‑GGTCAATCTCGACAAACTCACCGTCGCGGCGCTGGAAGGGAAAACTGAACTCaa < 1:165933/250‑1 (MQ=255) tGCCGCACAACGAGGAAGTGAACAGCAAACAGCTT‑TACTGGCCGTTCACTGGTGAGAAGCAGGATCAGAAGGATGATCTGAAACTGAAAATTACTGGCCAAATGACAGATTACACGATCACTATGCGGACGGCAGTGAAGTGACAGGAGATCCCGTCCGCGACCAATAACCTCGACGCCAAAGGTAATGAACA‑CACAGTCAATCTCGACAAACTCACCGTAGCGGCGATGGAGGGGcaaagtagactcaa > 2:9085/1‑240 (MQ=255) gccgcataaagtagAAGTGAACAGCAAACAGATTGTA‑TGGTCGGTCCCTGGTGAGAAGCAGGATCAGGCGTATGATCCGAAACGGAATCTTACCGGCAAAATGACCGATTACACTCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGAACCCGACCGCGACTATTACCCTTGACGCCAAAGGAAATGAACAGCA‑GGTCAATCTCGACAAACTCACCGTCGCGGCGCTGGAAGGGAAAACGGAACTCAAgg < 2:303045/238‑1 (MQ=255) gggAAGTGTACAGCAACCAGCTT‑TACGGGGCATTCACTGGTGAGAAGCAGTACCAGGCGGATGATCTGAGACTGAAACGTCCCGGCAAAAAGACCGCTCACCCGCGCTCTATGCGTACGGCAGTGAAGGGACAGGAGAGCCCTTCCGTGACTATTACCCTCGACGGCACAGGTAATGAACAGCA‑GGTCAATCTCTACAAACTCACCGTCGCGGCGCTGGAAGTGAAATCTGAACTCAAGTCGTTGCTCGAc < 2:19131/250‑1 (MQ=255) ggAAGTGAACAGCAAACAGCTT‑TACTGGCCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAATGGACAGGAGATCCCGTCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACCGCA‑GGTCAATATCGAAAAACTCACCGTCGCGGCGCTGGAAGGGAAAACTGAACTCAAGGCGTTGCTCGACt > 2:343714/1‑251 (MQ=255) cAAACAGCTT‑TACTGGCCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGTCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAGCA‑GGTCAATCTCGACAAACTCACCGTCGCGGCGCTGGAAGGGAAAACTGAACTCAAGGCGTTGCTCGACTGGCAACAGGcc > 1:82167/1‑250 (MQ=255) aaCAGCTT‑TACTGGCCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGTCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAGCA‑GGTCAATCTCGACAAACTCACCGTCGCGGCGCTGGAAGGGAAAACTGACATCACGGCGTTGCTCGACTGGCAACAGGCCAtt > 1:259460/1‑251 (MQ=255) tGGTGAGAAGCAGTAGCAGGCGGATGATCTGAAACGGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATTCGTACGGCAGTGAAGGGACAGGAGATCCCGTCCGCGACTATTACCCTCGACGCCa < 1:165654/131‑1 (MQ=255) tGGTGAGAACCAGTATCAGGCGGATGATCTGAAACTGAAACTTCCCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGGCCGCGACTATTACCCTCGCCGCCa > 2:165654/1‑131 (MQ=255) aaGCGGTATCATGCGGATGAGCGTAAACTGAAACGTACCGGCAAAATGACCGATTACACGCTCTCTAGTCGTACGGCAGTGAAGGGAAAGGAGATCCCGTCCGCGACTATTCCCCGCGACGCCAAAGGTAATGAACAGCA‑GGTCAATCTCGACAAACTTGCCGTCGCGGCGCTGGAAGTGAAAACTGAACTCAAGGCGGTTCGCGACTGGCAACAGGCCATTAGTTGGCGCGGTGAGCTAACGA‑TTAACgg < 2:178343/251‑1 (MQ=255) gTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGAGCCCGTCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAGCA‑GGTCAATCTCGACAAACTCACCGTCGCGGCGCTGGAAGGGAAAACTGAACTCAAGGCGTTGCTCGACTGGCAACAGGCCATTAGTTGGCGCGGTGAGCTAACGC‑TTAACGGCATTa < 1:121449/251‑1 (MQ=255) tATCAGGCGGATGATCTGAAACTGCAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACCGGCGATCCCGTCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAGCA‑GGTCAATCTCGACAAACTCACCGTCGCGGCGCTGGAAGGGAAAACTGAACTCAAGGCGTTGCTCGACTGGCAACAGGCCATTAGTTGGCGCGGTGAGCTAACGC‑TTAACGGCATTa > 1:259074/1‑250 (MQ=255) aTCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGTCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAGCA‑GGTCAATCTCGACAAACTCACCGTCGCGGCGCTGGAAGGGAAAACTGAACTCAAGGCGTTGCTCGACTGGCAACAGGCCATTAGTTGGCGCGGTGAGCTAACGC‑TTAACGGCATTaa < 1:102414/250‑1 (MQ=255) cGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGTCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAGCA‑GGTCAATCTCGACAAACTCACCGTCGCGGCGCTGGAAGGGAAAACTGAACTCAAGGCGTTGCTCGACTGGCAACAGGCCATTAGTTGGCGCGGTGAGCTAACGC‑TTAACGGCATTAACACCGcc < 1:343714/251‑1 (MQ=255) aaactgaaactTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGTCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAGCA‑GGTCAATCTCGACAAACTCACCGTCGCGGCGCTGGAAGGGAAAACTGAACTCAAGGCGTTGCTCGACTGGCAACAGGCCATTAGTTGGCGCGGTGAGCTAACGC‑TTAACGGCATTAACACCGCCA‑AAGAGTTccc > 1:342433/1‑251 (MQ=255) aactgaaactTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGTCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAGCA‑GGTCAATCTCGACAAACTCACCGTCGCGGCGCTGGAAGGGAAAACTGAACTCAAGGCGTTGCTCGACTGGCAACAGGCCATTAGTTGGCGCGGTGAGCTAACGC‑TTAACGGCATTAACACCGCCA‑AAGAGTTCCCg < 1:358204/251‑1 (MQ=255) aactgaaactTACCGGCAAAATGACCAATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAGCA‑GGTCAATCTCGACAAACTCACCGTCGCGGCGCTGGAAGGGAAAACTGAACTCAAGGCGTTGCTCGACTGGCAACAGGCCATTAGTTGGCGCGGTGAGc < 1:168396/213‑1 (MQ=255) aaactTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGTCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAGCA‑GGTCAATCTCGACAAACTCACCGTCGCGGCGCTGGAAGGGAAAACTGAACTCAAGGCGTTGCTCGACTGGCAACAGGCCATTAGTTGGCGCGGTGAGCTAACGC‑TTAACGGCATTAACACCGCCA‑AAGAGTTCCCGGACTg > 1:209929/1‑251 (MQ=255) aaactTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGTCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAGCA‑GGTCAATCTCGACAAACTCACCGTCGCGGCGCTGGAAGGGAAAACTGAACTCAAGGCGTTGCTCGACTGGCAACAGGCCATTAGTTGGCGCGGTGAGCTAACGC‑TTAACGGCATTAACACCGCCA‑AAGAGTTCCCGGACTg > 1:70461/1‑251 (MQ=255) ctTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGTCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAGCA‑GGTCAATCTCGACAAACTCACCGTCGCGGCGCTGGAAGGGAAAACTGAACTCAAGGCGTTGCTCGACTGGCAACAGGCCATTAGTTGGCGCGGTGAGCTAACGC‑TTAACgg > 1:285261/1‑218 (MQ=255) aaaTGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGTCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAGCA‑GGTCAATCTCGACAAACTCACCGTCGCGGCGCTGGAAGGGAAAACTGAACTCAAGGCGTTGCTCGACTGGCAACAGGCCATTAGTTGGCGCGGTGAGCTAACGC‑TTAACGGCATTAACACCGCCA‑AAGAGTTCCCGGACTGGCCGTCGAAACTc > 1:93314/1‑251 (MQ=255) aTGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCTCGTCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAGCA‑GGTCAATCTCGAAAAACTCACCGTCGCGGCGCTGGAAGGGAAAACTGAACTCAAGGCGTTGCTCGACTGGCAACAGGCCATTAGTTGGCGCGGTGAGCTAACGC‑TTAACGGCATTAacac < 1:10250/215‑1 (MQ=255) gACCGATTACCCGCTCTCTAGGCGTACGGCAGTGAAGGGACAGGAGATCCCGTCCGCGACTATTACCCACGACGCCAAAGGTAATGAACAGCA‑GGTCAAGCTCGACAAACTCACCGTCGCGGCGCTGGAAGGGAAAACTGAACTCAAGGCGTTGCTCGACGGGCAACAGGCCATTAGTTGGCGCGGTGAGCTAACGC‑TTAACGGCATTAACACCGCCA‑AAGAGTTCCCGGACTGGCCGTCGAAACTCAATg < 2:70461/251‑1 (MQ=255) ttACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGTCCGCGACTATTCCCCTCGACGCCAAAGGTAATGAACAGCA‑GGTCAATCTCGACAAACTCACCGTCGCGGCGCTGGAAGGGAAAACTGAACTCAAGGCGTTGCTCGACTGGCAACAGGCCATTAGTTGGCGCGGTGAGCTAACGC‑TTAACGGCATTAACACCGCCA‑AAGAGTTCCCGGACTGGCCGTCGAAACTCaa < 1:228021/243‑1 (MQ=255) ttACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGTCAGCGACTATTACCCTCGACGCCAAAGGTAATGAACCGCA‑GGTCAATCTCGACAAACTCACCGTCGCGGCGATGGAAGGGAAAAATGAACTCAAGGCGTTGCTCGACTGGCAACAGGCCATTAGTTGGCGCGGAGAGCTAACGC‑TTAACGGCATTAAAACCGCCA‑AAGAGTGCCCGGAATGGCCGTcagaaatcaaagatcggg > 2:228021/1‑234 (MQ=255) cacGCTCTCTATGCGTACGGCAGTGAAGGTACAGGAGATCCCGTCCGCGACTATTACCCTCGACGCCAAAGGTACTGAACAGCA‑GGTCAATCTCGACAAACTCACCGTCGCGGCGCTGGAAGGGCAACCTGAACTCAAGACGTTACTCGCCTGGCCACAGGCCCTTAGTTGGCGCGGTGCGCTAACGC‑TTACCGGCATTAACACC‑CCACAAGAGTTCCCGGACTGCCCGTCggacctccctgtcttagtg > 2:71452/1‑232 (MQ=255) gctatctATGCGTACGGCAGTGAAGGGACAGGAGATCCCGTCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAGCA‑GGTCAATCTAGACAAACTCACCGTCGCGGCGCTGGAAGGGAACACTGAGCTCAAGGCGATGCTCAACGCGCATCAGGCCATTAGTGGGGACGCGCAGCTAA‑GCGTTAACGTCATGCACACAGCAG‑AAGAGTTCCCGGACTCGACGGCGAAAGTCAATGGCTTGATTaat > 1:250162/5‑249 (MQ=255) ctATGCTTACGGCAGTGAAGGGACAGGAGATCCCGTCCGCGACTATTACCCCCGACGCCAAAGTTAATGAACAGCA‑GGTCAATCTCGACAAACTCTCCGTCGCGTCGCTGGAAGTGAAAACTGAACGCAAGGCGTTGCTCGACTGGCAACAGGCCATTAGTTGGCGCAGTTTGCTAACGC‑TTAACGGCATTAACACCGCCA‑AATAGTTCCCGGACTGGCCGTCGAAACTCAATGGCGTGATTAAAAcc < 1:190645/248‑1 (MQ=255) cGTACGGCAGTGAAGGGACAGGAGATCCCGTCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAGCA‑GGTCAATCTCGACAAACTCACCGTCGCGGCGCTGGAAGGGAAAACTGAACTCAAGGCGTTGCTCGACTGGCAACAGGCCATTAGTTGGCGCGGTGAGCTAACGC‑TTAACGGCATTAACACCGCCA‑AAGAGTTCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAg < 1:315409/251‑1 (MQ=255) cAGGAGATCCCGTCCGAGACTATTACCCTCGACGCCAAAGGTAATGAACAGCA‑GGTCAATCTCGACAAACTCACCGTCGCGGCGCTGGAAGGGAAAACTGAACTCAAGGCGTTGCTCGACTGGCAACAGGCCATTAGTTGGCGCGGTGAGCTAACGC‑TTAACGGCATTAACACCGCCA‑AAGAGTTCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCACCTg > 1:308097/1‑251 (MQ=255) | GGCGCGCTGCGCGAACAGCTGGAGATTGGCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTT‑TACTGGCCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAGCA‑GGTCAATCTCGACAAACTCACCGTCGCGGCGCTGGAAGGGAAAACTGAACTCAAGGCGTTGCTCGACTGGCAACAGGCCATTAGTTGGCGCGGTGAGCTAACGC‑TTAACGGCATTAACACCGCCA‑AAGAGTTCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCACCTG > NC_000913/4445066‑4445553 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |