| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,322,786 | G→A | intergenic (‑364/+550) | phnF ← / ← phnD | putative transcriptional regulator PhnF/phosphonate/phosphate ABC transporter periplasmic binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,322,786 | 0 | G | A | 89.8% | 125.2 / 1.1 | 49 | intergenic (‑364/+550) | phnF/phnD | putative transcriptional regulator PhnF/phosphonate/phosphate ABC transporter periplasmic binding protein |
| Reads supporting (aligned to +/- strand): ref base G (2/3); new base A (20/24); total (22/27) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.47e-01 | |||||||||||
GAAACCGCGAATCGCTTCCCACAGGGTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTCGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCATCAGGCGGCGAACGGGCTGGTAAACCCACCACGGCACCAGGTTTTCGGCGCTCATCAGGCCAAAGGGGATGGAGAGAACCACCGCCAGCGCGGTGCCCCAGACGGCGATTTGCAGCGT > NC_000913/4322539‑4323017 | gaacccgctactgctgtCCCACGGGTTGCCGCAGATCCCGCCTGCGCCGACCATGCCGACGACGGTCGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCgatgg < 1:111991/235‑1 (MQ=255) aaTCGCTTCCCACAGGGCGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTCGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATa > 1:300745/1‑250 (MQ=255) cctacctcggtggtcgcctggtgcccGCCTGCGCCGACCCTGCCGCCATCGTCCTCCGAGCTGACGTGGGATTCGATGTGAGAGAGGGAGTAGTAGATCAGCAGTGGCATCCCCTTGGGCATCACGCCGTAGAGGATCCCTTCGAGCTTGTTGGAGACTGTGGCGCGAATGCCTTCCACCGGGACGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGTTTAAACAg < 2:297879/228‑1 (MQ=255) ccccatggTGACGCCGAACCCGCCTGCGCCGTCCATGCCGACGACGGTCGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGcgcca < 1:170178/245‑1 (MQ=255) ccACAGGGTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTCGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGcgcc > 1:377694/1‑250 (MQ=255) gggTGACGCCGATCACGCCTGCGCCGACCATGCCGACGACGGTCGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGcgccagcacg > 1:124573/1‑251 (MQ=255) gATCCCGCCTGCGCCGACCATGCCGACGACGGTCGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCagcacgccagcacgcc < 1:130690/251‑1 (MQ=255) gATCCCGCCTGCGCCGACCATGCCGACGACGGTCGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCagcacgccagcacgcc < 1:33162/251‑1 (MQ=255) aTCCCGGCTGCGCCGACCATGCCGACGACGGTCGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAACAGCGCCAgcactccagcacgcca < 1:16702/251‑1 (MQ=255) cccccccTGCGCCGACCATGCCGACGACGGTGGCCGAGCGGACGTGGGATGCGAAGCGAGAGAGAGAGTAGGAGAGCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTGCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGcacgccagcacgccag < 2:66615/246‑1 (MQ=255) ccagCCTGCGCCGACCATGCCGACGACGGTAGCAGAGCGGACGTTGGATTCGAAGCGATGGAGGGAGTAGGCGATCAGCAGTGGCATCACCTGTGGCAGAACGACGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTACCACCGGGCCGGGCTCAATCGCTTCCACCGCATCGGAAAGCAGCTTGGAGAGCACGCCGGTGGGGTGGATAACCAGCGCCACCacgccggcacgccagc > 2:169424/4‑251 (MQ=255) ccTGCGCCGACCATGCCGACGACGGTCGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTGCGAGCTTGTGGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAAc < 1:52444/251‑1 (MQ=255) aTGCCTACGACGGTCGCCGAGTGGACGTTGGATTCGATGCGAAAGAGGGATTAGGATATCAGCAGTGGCATCACCTGGGGCAGCACGCCGTAGAGGATCTCTTCGGGCTTGTTTGCACCGGTTGCTCGAATGCCTTCCACCGGGCCGGGCTCAAGCGCTGCCACCGCTGCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGggccgaggccg < 1:385043/251‑1 (MQ=255) acgGTCGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGa < 1:281715/249‑1 (MQ=255) gCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCAGCACCTGTGTCAGCACGCCGGAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCCCCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCGGATGGTGTGGAAAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGCGCCGAGGCCGACGGCGACCACGAAc < 1:308204/251‑1 (MQ=255) ggactgtGGAGTCGATGCTATAGAGGGAGTAGGAGATCAGCAGTGGCATCTCCTGGGGCAGCACGCTGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCGTCCACCGCTGCGGAAAGCAGCTTGGAGATCACGCCGGTGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGTGCCGAGGCCGACGGCGACCACGAACAGCATgg < 2:179583/245‑1 (MQ=255) cGTTGGATTCGAAGCGATAGAGGGCGTAGGTGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGCATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGCAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCCCGCCAGCACGCCCGCTAACGGGCCGAGGCCGACGGCGACCACGaccacaatggcgc > 2:74933/1‑239 (MQ=255) gTTGGATTCGAAGCGATAGAGGGAGTCGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGAACGCCGATGGTGGGGATAAACAGCGCCAGCACGCCCGCCCGCCAGCGAACCGACCGAGGCCGACGACGACCACGCACAGCCTGGCGa > 1:337768/1‑250 (MQ=255) aaGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCg > 1:360428/1‑251 (MQ=255) gCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGtt < 1:371131/251‑1 (MQ=255) gATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTaa < 1:248961/251‑1 (MQ=255) ggAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACTATTTCGTTAATGGcgcg > 1:284840/1‑251 (MQ=255) gTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCa < 1:248217/251‑1 (MQ=255) gTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCa < 1:185040/251‑1 (MQ=255) gTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCATTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTAGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCCGCGAACGGGCCGAGGACGGCGGCGACCACGAAAAGCATGGCGGAGAACCTTTCGTTAATGGCGCGGc > 2:303200/1‑250 (MQ=255) aGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGCCGGCGACCACGAACAGCATg > 1:220806/1‑220 (MQ=255) ggAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGc > 1:5445/1‑251 (MQ=255) gagtacagcagGGGCCTCCCCTTTGGCAGATCGCCTTAGAGGATCTCTGCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGTTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCTGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCTCGGCAGGCg < 2:373228/246‑1 (MQ=255) gagaTCAGCAGTGGCATCACCTGTGGCAGCACGCCTGAGAGGATCTCTTCGAGCTTGTTGGCTCCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAATACCATTTCGTTAATGGCGCGGCAGGCg < 1:333015/251‑1 (MQ=255) gTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCATCAggg > 1:110753/1‑250 (MQ=255) gTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCATCAggc < 1:108015/251‑1 (MQ=255) tGGCATCACCTGTGGGAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGACCATCAggcg > 1:366108/1‑251 (MQ=255) ccTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCATCAGGCGGCGaa < 1:314531/248‑1 (MQ=255) tgtgGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCAACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCAACAGGCGGCGACCGGGc > 1:165566/1‑251 (MQ=255) ggCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCATCAGCCAGCGAACGGGccgg > 1:291098/1‑248 (MQ=255) agcaAGCCGTAGAGGATCTCTTCGATCTTGTGGTCCCCGGTGGCGCGAATGCCGTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCATCAGGCGGCGAACGGGCTGGTaa < 1:242215/251‑1 (MQ=255) gTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCATCAGGCGGCGAACGGGCTGGTAAACccaccc > 1:15399/1‑250 (MQ=255) agagGATCTCTTCGATCTTGTTGGCTCCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCCCCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCATCAGGCGGCGAACGGGCTGGTAAACCcaccac < 1:13436/250‑1 (MQ=255) ctTCGAGCTTATTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCATCAGGCGGCGAACGGGCTGGTAAACCCACCACGGCACCa < 1:279628/248‑1 (MQ=255) cGAGCTTGTTGGCACCGGGGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCTTCCATCAGGCGGCGAACGGGCTGGTAAACCCACCACGGCACCAGGtttt < 1:134591/251‑1 (MQ=255) gttgGCACCGGTGGCTCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTGGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCATCAGGCGGCGAACGGGCTGGTAAACCCACCACGGCACCAGGTTTTCGGCGCt < 1:352926/251‑1 (MQ=255) cACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAACCAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCATCAGGCGGCGAACGGGCTGGTAAACCCACCACGGCCCCAGGTTTTCGGCGCtcatc > 1:159931/1‑250 (MQ=255) cgtaggggcgattgcctcccgtcgggccgggcTCAATCTCTTCCCCCGCTTCGGAAAGCCGGTTGGAGAGTACGGCGAGGGTGTGGATAAACAGCGCCAGCACGCCTGCCCGCCAGCGAACGGGCTGAGGCCGACGGCGACCACGAACAGCATGGTGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCATCAGGCGGCGAACGGGCTGGTAAACCCACCACGGCACCAGGTTTTCTGCGCTCATCAGGc < 2:381869/229‑1 (MQ=255) cGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCATCAGGCGGCGAACGGGCTGGAAAACCCACCACGGCACCAGGTTTTCGGCGCTCATCAGGc > 1:337746/1‑251 (MQ=255) cGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCAACAGGCGGCGAACGGGCTGGTAAAACCACCAAGGCACCAGGTTTTCGGCGCTCATCAGGc > 1:273006/1‑251 (MQ=255) gAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCATCAGGCGGCGAACGGGCTGGTAAACCCACCACGGCACCAGGGTTTCGGCGCTCATCAGGCCAAAggggg > 1:186871/1‑250 (MQ=255) cACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCATCAGGCGGCGAACGGGCTGGTAAAACCACCACGGCACCAGGTTTTCGGCGCTCCTCAGGCCAAAGGGGATGGAGAGAac > 1:290246/1‑251 (MQ=255) ggtccggtctcaactgcctcacccGCTTCGGAAAGCAGCGTGGAGGGAACGCCGATGGGGTGGATAAACAGCGCCTGCACGCCAGCACGTCAGCGAACGGGCCGAGGCCGACGGCTACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCATCAGGCGGCGAACGGGCTGGTAAACCCACCACGGCACCAGGTTTTCGGCGCTCATCAGGCCAAAGGGGATGGAGAGAaccacc < 2:336350/229‑1 (MQ=255) ggcgcgtgggtcgccggcgcGGTGGT‑TGGATAACCTGCCCCGGCGCGCCAGCGCGCCAGCGAACGGGCGGGGGCGGGTGGCGACCAAGAAACGGATGGCGAAGACCATCTCGTTAATGGCGCGGAGGGCGTCCATCAGGCGGCGAACGTGCGGGTAAACCCCCCACGGCACCAGGTTTTCGGCGCTCATCAGGCCAAAGGGGAGGGAGCGAACCTCCGCCAGCGCGGTGCCCCAGACGGTGATTTGCAGCg < 2:83632/232‑1 (MQ=255) cagcTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCCTCAGGCGGCGAACGGGCTGGTAAACCCACCACGGCACCAGGTTTTCGGCGCTCATCAGGCCAAAGGGGATGGAAAGAACCACCGCCAGCGCGGTGCCCCCGCCGGCGATTTGCAGCGt > 1:288363/1‑251 (MQ=255) | GAAACCGCGAATCGCTTCCCACAGGGTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTCGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCATCAGGCGGCGAACGGGCTGGTAAACCCACCACGGCACCAGGTTTTCGGCGCTCATCAGGCCAAAGGGGATGGAGAGAACCACCGCCAGCGCGGTGCCCCAGACGGCGATTTGCAGCGT > NC_000913/4322539‑4323017 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |