| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,834,564 | G→A | Q456* (CAA→TAA) | yicJ ← | putative xyloside transporter YicJ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,834,564 | 0 | G | A | 89.8% | 120.8 / 2.5 | 52 | Q456* (CAA→TAA) | yicJ | putative xyloside transporter YicJ |
| Reads supporting (aligned to +/- strand): ref base G (4/1); new base A (28/16); total (35/17) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.46e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AAAATGCTCAATCCGCACACCGACAATACCTTCC‑TGTGGGGAGAAAAAGCGCAACGTAAATAAAGGCGTATCAAGCTGCCAGGTACGTTCACGCACATCACGGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTT‑GAG‑AGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGT‑AGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGG > NC_000913/3834322‑3834806 | aaaaTGCTCAATTCGCACCCCGACAATTGCTTCC‑TGTGGAGAGAAAAAGCGGAAGGTAAGTAAAGGCGTATCAAGCTGCCAGGTACGTTCATGCACAGCACGGGGTGCAGTATAGACCTCCCTTTCATTATCCTTCTGTTCAGCCTCTAACACCTTAAGGGGTTGAATCATATTGAGGCCAGTTTGAATCAACCTGTTTCCAGCGCTAATCTTCATTGGCGTTCCTTAGTTCTGATCTGCTT‑AAG‑AGGTGa < 2:23007/251‑1 (MQ=255)aaaaTGCTCAATCCGCACACCGACAATACCTTCC‑TGTGGGGAGAAAAAGCGCAACGTAACTAAAGGCGTATCAAGCTGCCAGGTACGTTCACGCACCTCACGGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGACCACCTGACGCGGGAGAATCAAATTGAGGCCAGGTTGAATAAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTATGCACTTCTT‑AAG‑AGGTgc > 2:247750/1‑250 (MQ=255) attcttaaTCCGCACAACGACAATACCTGCCATG‑GGTGAGAAAAAGAGCAAAGTAAAAAAAGGCGTATCAAGCTGCCATGTACGTTCCCGCACATCACGGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTCCAACCTCAAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTG‑AAG‑AGGTGAAtt < 2:100071/245‑1 (MQ=255) aaTCCGCACACCGACAATACCTTCC‑TGTGGGGAGAAAAAGCGCAACGTAAATAAAGGCCTATCAAGCTGCCAGGTACGTTCACGCACATCACGGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTT‑AAG‑AGGTGAATTGTTGCt < 1:8904/251‑1 (MQ=255) ggAGAAAAAGCGCACCGTAAATAAAGGCGTATCAAGCTGCCAGGAACGTTCAAGCACATCACGGGGGGAAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGCCGCATCATATTGAGCCCAGGTTGATTCAACCAGTTTCAATAGCTAATTTTCATTGCCGTTCCTTCGTTATGCCCTTATT‑TAG‑CGGTGAATTTATGCTGGAAACGGTGTTTAACCTCCGCCAGCGGtt > 2:336008/1‑251 (MQ=255) cgcAACGTAAATAAAGGCGTATCAAGCTGCCAGGTACGTTCACGCACATCACGGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTATGCACTTCTT‑CAG‑AGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAAAGGt > 2:314259/1‑251 (MQ=255) gTAAATAAAGGCGTATCAAGCTGCCAGGTACGTTCACGCACATCACGGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACCCCTGAAGCGGGTGAATCAACTTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTT‑AAG‑AGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTc > 1:217881/1‑249 (MQ=255) aaaGGCGTATCAAGCTGCCAGGTACGTTCACGCACATCACGGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTT‑AAG‑AGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATtgtg < 1:61658/251‑1 (MQ=255) aaGGCGTATCAAGCTGCCAGGTACGTTCACGCACATCACGGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTT‑AAG‑AGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGc > 1:277951/1‑251 (MQ=255) aGGCGTATCAATCGGTCAGGTACGTTCACGCACAACACTGGGGCCATCATATACCACCATTTAATTATCCTGCTGTTCCAACGCGAACACCTGAAGCGGTTGAATCAAATTGAGGACAGGTTGAAGCAACCAGTTTCCATCTCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTT‑AAG‑AGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGGCAGCTGTTCCATAACGGTTGTCAGATTGTGcg < 2:144905/251‑1 (MQ=255) ggCGTATCAAGCTGCCAGGTACGTTCACGCCCATCACGGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGCATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTT‑AAG‑AGGTGTATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCAATAACGGTTTTCAGATTATGctt > 2:332984/1‑249 (MQ=255) aTCAAGCTGCCATGTACGGTCACGCACATCACGGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTAGAACACCTGAAGCGGGTGAATCAAATTGAGGCCATGTTGAATCAAACAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGAACTTCTT‑AAG‑AGATGAATTGTTGCTGGCCACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGAGCGTCgtg > 2:298161/1‑250 (MQ=255) cAAGCTGCCAGGTACGTTCACGCACATCACGGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTT‑AAG‑AGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCgtgagg > 1:25389/1‑250 (MQ=255) aGGTACGTTCACGCACATCACGGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTT‑AAG‑AGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGagt‑agt > 1:241356/1‑249 (MQ=255) ggTACGTTCACGCACATCACGGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTT‑AAG‑AGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGT‑AGTAGc > 1:374997/1‑251 (MQ=255) aTCACGGGGGGCAGCATAGACCACCATTTCATTCTCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAACTTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTT‑AAG‑AGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGT‑AGTAGCGTTTAGCGATAATcg > 1:137347/1‑251 (MQ=255) ggCAGCATAGACCACCATTTCATGAGCCTGCTGTTCAACCTCGAACCCCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAAGCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTT‑GAG‑AGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGT‑AGTAGCGTTTAGCGATAATCGCGCTCAGCa < 2:69557/251‑1 (MQ=255) aTAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTT‑AAG‑AGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGT‑AGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAAc > 1:98118/1‑251 (MQ=255) caTTTCATTATACTGATGTTCAACCTCAAACAACTACAGCGGGTGAATCAAATTATGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCATCAGTTCTGCACTTCTTACAA‑AGAT‑AATTGTTGATGGCACCGGAGTTTACCCTGAGCCAGCAGTTCCAAAAAGGTTTTCCGATTGTGAGTAGAGAGTG‑GTGAGTAGCATTTAACGATAATAGCGCTCAGACAATAACCGATCGc > 2:34874/1‑249 (MQ=255) tCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTT‑AAG‑AGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGT‑AGTAGCGGTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGaa < 1:336008/250‑1 (MQ=255) aTTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTT‑GAG‑AGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGGGTGATG‑AATGGCGTTTAGCGTTAATCGGGCCCCGCAAATAACAAATCGCCGGaaaa > 2:1144/1‑248 (MQ=255) ctgTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTCAATCAACCAGTTTCCATCGCTAATTTTCATTGCAGTTCCTTAGTTCTGCGCTTCTT‑AAG‑AGGTGAATTGTTGCTGGCAACGCCGTTTACCCTGAGCCAGCTGTTACATAACGGTTTTCAGCTTGTGCGTCGTGAGTGAGT‑AGTAACGTTTAGCGATAATCGCGCTAAGCAAATAACAGATCGCCGGAACAATCGTGAAt > 2:35995/1‑250 (MQ=255) tCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTCGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTT‑AAG‑AGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGT‑AGTAGCGTTTAGCGATAATCGCGCTCAGCAAATACCAGATCGCCGGAACAATCGTGAATAgcgc > 1:17116/1‑251 (MQ=255) ccTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTT‑AAG‑AGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGT‑AGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCaat > 1:203824/1‑250 (MQ=255) cGAACACCTGAAGCGGGTTAAACAAATTTAGGCCAGGTTGAATCAACCTGTTTCCATCGCTAATTTACATTGCCGTTCCTTAGTTCTGCACTTCTT‑AAT‑AGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGT‑AGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCTCaataa < 2:145665/249‑1 (MQ=255) ccTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTT‑AAG‑AGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGT‑AGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTa < 1:142286/251‑1 (MQ=255) taaGCGGGAGAATCAAATTGAGGCCAGGTTGACTCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTT‑AAG‑AGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTAGTGAGTGAGT‑AGTAGCGTTTAGCGATACTCGCGCTCAGCAAATAACAGATCGACGGAACAATCGTGAATAGCGCAATAATGATGCTAAt > 2:22466/2‑250 (MQ=255) gAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTT‑AAG‑AGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTTCGTCGTGATTGAGT‑AGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTaa < 1:273343/249‑1 (MQ=255) gggTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTT‑AAG‑AGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGT‑AGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGgc > 1:76415/1‑251 (MQ=255) gTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTT‑AAG‑AGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGT‑AGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAg > 1:117284/1‑202 (MQ=255) gAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTT‑AAG‑AGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGT‑AGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTg > 2:230136/1‑251 (MQ=255) cAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTT‑AAG‑AGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGT‑AGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCt > 1:302322/1‑251 (MQ=255) aaaTTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTT‑AAG‑AGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGT‑AGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTg < 1:294247/251‑1 (MQ=255) gAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTT‑AAG‑AGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGT‑AGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGAGGCGCTGTTCTGCGCtt > 2:249657/1‑251 (MQ=255) aGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTT‑GAG‑AGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGT‑AGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCttt > 1:38655/1‑251 (MQ=255) tggTTGAATCAACCAGTTTCCATCGCTATTTTTCATTGCCGTTCCTTAATTCTACACTTCT‑‑GAGGAGGTGAATTGTTGCTGGTAACGGCGTTTACCCTGAGCCAGCTGTTCCATAAAGAATTTCAGATTGTGCGTCGTGAGTGAGT‑AGTAGCGATTAGCGATAATCGCTCTCAGCAAATAACAAATCGACGGAACAATCGGGAATCGCGCAATAATGATACTAATCGAGGCCCTGTTCCGCGCTTTTTCTg > 2:298716/2‑251 (MQ=255) aaCCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTT‑AAG‑AGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGT‑AGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCata < 1:314259/251‑1 (MQ=255) aGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTT‑AAG‑AGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGT‑AGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGCTCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCATGGCGCTGTTCAGCGCTTTTTCTACCGCATCATATCCg > 2:244316/1‑251 (MQ=255) gCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTT‑AAG‑AGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCTGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGGGAGC‑AGTAGCGTTTCGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGAGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATccacactaagcc > 2:361557/1‑240 (MQ=255) cTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTT‑AAG‑CGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTAAGATTGTGCGTCGTGAGTGAGA‑AGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGGGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTTCCCCCACATCACCGCCATAAGCCa > 2:203172/1‑250 (MQ=255) ttttCATTGCCGTTCCTTAGTTCTGCACTTCTT‑AAG‑TGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGAGAGT‑AGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATc > 1:203598/1‑251 (MQ=255) ttccGTTCCTTAGTTTTGCACTTCGT‑AAG‑AGGTGAATTTTTGCTGTCACCGGCGTTTACCTTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTGGTGAGTGAGT‑AGTAGCGTTTAGCGATAATCGCGCTCAGAAAATAACTGATCCCGGGAACAATCGTGAATAGCGTAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCTCATCTTATCCGCCATAAGCCAGCATCCAGCCg < 1:189927/248‑1 (MQ=255) tGCCGTTCTTTAGTTCGGCACTTCTT‑AAG‑AGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGATT‑AGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCATCATCCAGCCg < 1:58807/250‑1 (MQ=255) gTTCCTTAGTTCTGCACTTCTT‑AAG‑AGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGT‑AGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGc < 1:203134/149‑1 (MQ=255) gTTCATTAGTTCTGCACTTCTT‑AAG‑AGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGT‑AGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGc > 2:203134/1‑149 (MQ=255) ccTTAGTTCTGCACTTCTT‑AAG‑AGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGT‑AGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGAGCTGTTCTGCGCTTTTTCTGCCTCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAgc > 2:110573/1‑251 (MQ=255) tAGTTCTGCTCTTCTT‑AAG‑AGGTGAATTGTTGCTGTCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGGTCGTCGTGAGTGAGT‑AGTAGCGTGTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGGGGCGCTGTTCTGCGCttttt < 2:204358/202‑1 (MQ=255) tAGTTCTGCACTTCTT‑AAG‑AGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGT‑AGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCttttt > 1:204358/1‑202 (MQ=255) tAGTTCTGCACTTCTT‑AAG‑AGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGT‑AGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCa < 1:228776/222‑1 (MQ=255) cTGCACTTCTT‑AAG‑AGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGT‑AGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGcgccgc > 1:214005/1‑248 (MQ=255) tGCACTTCTT‑AAG‑AGGTGAATTGTTGCTGGCAAAGGCGTTTACACTGAGCCAGCTGTTACATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGT‑AGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGCTGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGTATCATATCCGCCATACGCCAGCATCCAGCCGATAAAAGCGccgccgc > 1:271931/1‑249 (MQ=255) cACTTCTT‑GAG‑AGGTGAATTGTTGCTGGCCACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGCGTGAGT‑AGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCATGGCGCTGTTCCGCGCTTTTTCTGCCGCATCATATCAGCCATACGCCAGCATACCGCCGATAAGCGCGCCGCCGAAgg > 2:199362/1‑251 (MQ=255) | AAAATGCTCAATCCGCACACCGACAATACCTTCC‑TGTGGGGAGAAAAAGCGCAACGTAAATAAAGGCGTATCAAGCTGCCAGGTACGTTCACGCACATCACGGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTT‑GAG‑AGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGT‑AGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGG > NC_000913/3834322‑3834806 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |