| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,646,970 | G→T | Q224H (CAG→CAT) | gor → | glutathione reductase (NADPH) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,646,970 | 0 | G | T | 94.4% | 104.1 / NA | 36 | Q224H (CAG→CAT) | gor | glutathione reductase (NADPH) |
| Reads supporting (aligned to +/- strand): ref base G (1/1); new base T (21/13); total (22/14) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.49e-01 | |||||||||||
ACCCGGATATTCCGGGCGTGGAATACGGTATTGATTCTGATGGCTTCTTCGCCCTTCCTGCTTTGCCAGAGCGCGTGGCGGTTGTTGGCGCGGGTTACATCGCCGTTGAGCTGGCGGGCGTGATTAACGGCCTCGGCGCGAAAACGCATCT‑GTTTGTGCGTAAACATGCGCCGCTGCGCAGCTTCGACCCGATGATTTCCGAAACGCTGGTCGAAGTGATGAACGCCGAAGGCCCGCAGCTGCACACCAACGCCATCCCGAAAGCGGTAGTGAAAAATACCGATGGTAGCCTGACGCTGGAGCTGGAAGATGGTCGCAGTGAAACGGTGGATTGCCTGATTTGGGCGATTGGTCGCGAGCCTGCCAATGACAACATCAACCTGGAAGCCGCTGGCGTTAAAACTAACGAAAAAGGCTATATCGTCGTCGATAAATATCAAAACACCAATATTGAAGGTATTTACGCGGTGG > NC_000913/3646732‑3647202 | ccccGGATATTCCGGGCGTGGAATACGGTATTGATTCTGATGGCTTCTTCGCCCTTCCTGCTTTGCCAGAGCGCGTGGCGGTTGTTGGCGCGGGTTACATCGCCGTTGAGCTGGCGGGCGTGATTAACGGCCTCGGCGCGAAAACGCATCT‑GTTTGTGCGTAAACATGCGCCGCTGCGCAGCTTCGACCCGATGATTTCCGAAACGCTGGTCGAAGTGATGAACGCCGAAGGCCCGCATCTGCACACCAAc < 1:101591/250‑1 (MQ=255) atTCCGGGCGTGGAATACGGTATTGATTCTGATGGCTTCTTCGCCCTTCCTGCTTTGCCAGAGCGCGTGGCGGTTGTTGGCGCGGGTTACATCGCCGTTGAGCTGGCGGGCGTGATTAACGGCCTCGGCGCGAAAACGCATCT‑GTTTGTGCGTAAACATGCTCCGCTGCGCAGCTTCGACCCGATGATTTCCGAAACGCTGGTCGAAGTGATGAACGCCGAAGGCCCGCATCTGCACACCAACGCCATcc < 1:13204/250‑1 (MQ=255) gTGGAATACGGTATTGATTCTGATGGCTTCTTCGCCCTTCCTGCTTTGCCAGAGCGCGTGGCGGTTGTTGGCGCGGGTTACATCGCCGTTGAGCTGGCGGGCGTGGTTAAAGGCCCCGGCGCGGAAACGCATCT‑GTTTGTGCGTAAAAATGCGCCGCTGCGCAGCTTCGACCCGATGATTTCCGAAAAGCTGGGCGGAGTGGTGAACGCCGAAGGCCCGCCTCTGCACCCCAACGCCATCCCGAAAGCggg > 1:67688/1‑250 (MQ=255) gAATACGGTATTGATTCTGATGGCTTCTTCGCCCTTCCTGCTTTGCCAGAGCGCGTGGCGGTTGTTGGCGCGGGTTACATCGCCGTTGAGCTGGCGGGGGGGATTAAAGGCCTCGGCGCGAAAAAGCATCTTGTTTG‑GGGGAAAAATGCGCCGCTGCGCAGCCTCGCCCCGGTGATTTCCGAAACGCTGGTCGAAGGGATGAACGCCCAAGGCACGCATCTGCACACAAACACCCTCCCGGAAGCgggagg > 1:369301/1‑247 (MQ=255) ggTATTGATTCTGATGGCTTCTTCGCCCTTCCTGCTTTGCCAGAGCGCGTGGCGGTTGTTGGCGCGGGTTACATCGCCGTTGAGCTGGCGGGGGTGATTAACGGCCTCGGCGCGAAAACGCATCT‑GTTTGTGCGTAAAAATGCACCGCTGCGCAGCTTCGACCCGGTGGTTTACGAAACGCTGGGCGAAGTGGTGAAAGCCCAAAGCCCGCCTCCGCACACCAACACCATTCCCAAAACGGGAGTGgaaa > 1:8053/1‑250 (MQ=255) aTTGATTCTGATGGCTTCTTCGCCCTTCCTGCGTTGCCAGAGCGCGTGGCGGTTGTTGGCGCGGGTTACATCGCCGTTGAGCTGGCGGGCGTGATTAACGGCCTCGGCGCGAAAACGCATCT‑GTTTGTGCGGAAACATGCGCCGCTGCGCAGCTTCGACCCGATGATTTCCGAAACGCTGGTCGAAGTGATGAACGCCGAAGGCCCGCATCTGCACACCAACGCCATCCCGAAAGCGGTAGTGAAAAATa < 1:162443/250‑1 (MQ=255) ttGCCAGAGCGCGTGGCGGTTGTTGGCGCGGGTTACATCGCCGTTGAGCTGGCGGGCGGGATTAAATGTCTCAGCGCGAAAAGCCATCT‑GTTTGTGCGTAAAAATGAGCCGCTGCGGCGCTTTGACACGATGATTTCCCAAAAACTGGTCGAAGGGGGGAACGCCGAAGGGCCGCATATGGCCACCAAAGCCATCCCGAAAGCGGGAGTGAAAAATACCGATGGGAGCCTGACGCTGGGGCTGGAAGATgg > 1:36894/1‑251 (MQ=255) gcgcGTGGCGGTTGTTGGCGCGGGTTACATCGCCGTTGAGCTGGCGGGCGTGATTAACGGCCTCGGCGCGAAAACGCATCT‑GTTTGTGCGTAAACATGCGCCGCTGCGCAGCTTCGACCCGATGATTTCCGAAACGCTGGTCGAAGTGATGAACGCCGAAGGCCCGCATCTGCACACCAACGCCATCCCGAAAGCGGTAGTGAAAAATACCGATGGTAGCCTGACGCTGGAGCTGGAAGATGGTCGCAGTg < 1:11489/251‑1 (MQ=255) tgGCGCGGGTTACATCGCCGTTGAGCTGGCGGGCGTGATTAACGGCCTCGGAGCGAAAACGCATCT‑GTTAGTGAATAAACATGCGCCGCTGCGCCGCTTCGACCCGATGATTTCCGAAACGCTGGTCGAAGGGATGAACGCCGGAGGCCCGCATCTGCACACCAACGCCATCCCCCAAGCGGTAGTGAAAAATACCGATGGTAGCCTGACGCTGGAGCTGGAAGATGGGCGCAGCGACACGGTGGATTGcc > 1:252891/1‑251 (MQ=255) tgctctgtttaatgtcccGTGGAGCTGGCGGGCGTTATTAACGGCCGCGGCTCGAAAACGCATCT‑GTTTGTGCGGAAACATGCGCCGCTGCGCAGCTTCGACCCGATGATCTACGAAACGCTGGTCGAAGTGATGAACGCCGAAGGCCCGCATCTGCACACCAACGCCATCCCGAAAGCGGTAGTGAAAAATACCGATGGTAGCCTTACGCTGGAGATGGAATATGGTCGCAGTGAAACGGTGGATTGcc < 2:44752/234‑1 (MQ=255) cgcgGGTTACATCGCCGTTGAGCTGGCGGGCGTGATTAACGGCCTCGGCGCGAAAACGCATCT‑GTTTGTGCGTAAACATGCGCCGCTGCGCAGCTTCGACCCGATGATTTCCGAAACGCTGGTCGAAGTGATGAACGCCGAAGGCCCGCATCTGCACACCAACGCCATCCCGAAAGCGGTAGTGAAAAATACCGATGGTAGCCTGACGCTGGAGCTGGAAGATGGTCGCAGTGAAACGGTGGATTGCCTGa < 1:293263/251‑1 (MQ=255) aCATCGCCGTTGAGCTGGCGGGCGTGATTAACGGCCTCGGCGCGAAAACGCATCT‑GTTTGTGCGTAAACATGCGCCGCTGCGCAGCTTCGACCCGATGATTTCCGAAACGCTGGTCGAAGTGATGAACGCCGAAGGCCCGCATCTGCACACCAACGCCATCCCGAAAGCGGTAGTGAAAAATACCGATGGTAGCCTGACGCTGGAGCTGGAAGATGGTCGCAGTGAAACGGGGGGTTGCCTGATTTGGGCg > 1:13653/1‑251 (MQ=255) cATCGCCGTTGAGCTGGCGTGCGTGATTAACGGCCTCGGCGCGAAAACGCATCT‑GTTTGTGCGTAAACATGCGCCGCTGCGCAGCTTCGACCCGATGATTTCCGAAACGCTGGTCGAAGTGATGAACGCCGAAGGCCCGCATCTGCACACCAACGCCATCCCGAAAGCGGTAGTGAAAAATACCGATGGTAGCCTGACGCTGGAGCTGGAAGATGGTCGCAGTGAAACGGTGGATTGCCTGATTTGGGCg > 1:274607/1‑250 (MQ=255) gcGCCGTTGAGCTGGCGGGCGTGATTAACGGCCTCGGCGCGAAAACGCATCT‑GTTTGTGCGTAAACAGGCGCCGCTGCGCAGCTTCGACCCGATGAGTTCCGAAACGCTGGTCGAAGTGATGAACGCCGAAGGCCCGCAGCTGCACACCAACGCCATCCCGAAAGCGGTAGTGAAAAATACCGATGGTAGCCTGACGCTGGAGCTGGAAGATGGTCGCAGTGAAACGGTGGATTGCCTGATTTGGGCGAtg < 2:171285/250‑2 (MQ=255) ttGAGCTGGCGGGCGTGATTAACGGCCTCGGCGCGAAAACGCATCT‑GTTTGTGCGTAAACATGCGCCGCTGCGCAGCTTCGACCCGATGATTTCCGAAACGCTGGTCGAAGGGATGAACGCCGAAGGCCCGCATCTGCACACCAACGCCATCCCGAAAGCGGTAGTGAAAAATACCGATGGTAGCCTGACGCTGGAGCTGGAAGATGGTCGCAGTGAAACGGTGGATTGCCTGATTTGGGCGATTGGTcgc > 1:2114/1‑251 (MQ=255) ggcgTGATTAACGGCCTCGGCGCGAAAACGCATCT‑GTTTGTGCGGAAACATGCGCCGCTGCGCAGCTTCGACCCGATGATTTCCGACACGATGGTCGAAGTGATGAACGCCAAAGGCCCGCATCGGCACACCAACGCCATCCCGAAAGCGGTAGTGAAAAATACCGATGGAAGCCTAACGCTGGACATGGCAGATGGTCGCAGTGAAACGGAGGATTGCCTGATTTGGGCGCTGGGTCGCGAggcggcca > 2:295683/1‑243 (MQ=255) ggggcgAAAACGCTGTT‑GTTGGTGCGTAAACAGGCGCCGTTGCGCAGCTTCGACCCGATGATTTCCGAAACGCGGGTCGAAGTGATGAACGCCGAAGGCCCGCATCTGCACACCACCGCCATCCCGAAAGCGGTAGTGAAAAATACCGATGGTAGCCTGACGCTGGAGCTGGAAGATGGTCGCAGTGAAACGGTGGATTGCCTGATTTGGGCGATTGGTCGCGGGCCTGCCAATGACAACATCAACCTg < 2:67688/246‑1 (MQ=255) aaCGCATCT‑GTTTGTGCGTAAACATGCGCCGCTGCGCAGCTTCGACCCGATGATTTCCGAAACGCTGGTCGAAGTGATGAACGCCGAAGGCCCGCATCTGCACACCAACGCCATCCCGAAAGCGGTAGTGAAAAATACCGATGGTAGCCTGACGCTGGAGCTGGAAGATGGTCGCAGTGAAACGGTGGATTGCCTGATTTGGGCGATTGGTCGCGAGCCTGCCAATGACAACATCAACCTGGAAGCCGCt < 1:207904/250‑1 (MQ=255) aaCGCATCT‑GTTTGTGCGAAAACATGCGCCGCTGCGCAGCTTCGACCCGATGATTTCCGAAACGCTGGTCGCAGTGATGAACGCCGACGCCCCGCATCTGCACACCAACGCAATCCCGAAAGCGGTAGTGAAAAATACCGATGGTAGCCTGACGCTGGAGCTGGAAGATGGTCGCAGTGAAACGGGGGATTGCCGGATTTGGGCGATTGGTCGGAAGCCTGCAAATGACCACATCACCCTAGAAGCCGCt > 2:207904/1‑250 (MQ=255) aCGCATCT‑GTTTGTGCGTAAACATGCGCCGCTGCGCAGCTTCGGCCCGATGATTTCCGAAACGCTGGTCGAAGTGATGAACGCCGAAGGCCCGCATCTGCACACCAACGCCATCCCGAAAGCGGTAGTGAAAAATACCGATGGTAGCCTGACGCTGGAGCTGGAAGATGGTCGCAGTGAAACGGTGGATTGCCTGATTTGGGCGATTGGTCGCGAGCCTGCCAATGACAACATCACCCTGGAAGCCGCTgg < 1:194097/251‑1 (MQ=255) cgcatcgttttGTGCTTAAACATGCGCCGCTGCGCAGCTTCGACCCGATGATTTCCGAAACGCTGGTCGAAGTGATGAACGCCGAAGGCCCGCATCTGCACACCAACGCCATCCCGAAAGCGGGAGTGAAAAATACCGATGGTAGCCTGACGCTGGAGCTGGAAGATGGTCGCAGTGAAACGGTGGATTGCCTGATTTGGGCGATTGGTCGCGAGCCTGCCAATGACAACATCAACCTGGAAGCCGCTGGc < 1:11329/243‑1 (MQ=255) t‑GTTTGTGCGTAAACATGCGCCGCTGCGCAGCTTCGACCCGATGATTTCCGAAACGCTGGTCGAAGTGATGAACGCCGAAGGCCCGCATCTGCACACCAACGCCATCCCGAAAGCGGTAGTGAAAAATACCGATGGTAGCATGACGCTGGAGCTGGATGATGGCCGCAGAGAAACGGTGGATTGCCTGATTTGGGAGATTGGTCGCGAGCCTGCCAATGACAACATCAACCCGGAAGCCGCTGGAGTTaa > 1:379988/1‑250 (MQ=255) tAAACATGCGCCGCTGCGCAGCTTCGACCCGATGATTTCCGAAACGCTGGTCGAAGTGATGAACGCCGAAGGCCCGCATCTGCACACCAACGCCATCCCGAAAGCGGTAGTGAAAAATACCGATGGTAGCCTGACGCTGGAGCTGGAAGATGGTCGCAGTGAAACGGTGGATTGCCTGATTTGGGCGATTGGTCGCGAGCCTGCCAATGACAACATCAACCTGGAAGCCGCTGGCGTTAAAACTAACGaa > 1:374964/1‑250 (MQ=255) cATGCGCCGCTGCGCAGCTTCGACCCGATGATTTCCGAAACGCTGGTCGAAGTGATGAACGCCGAAGGCCCGCATCTGCACACCAACGCCATCCCGAAAGCGGTAGTGAAAAATACAGATGGTAGCCTGACGCTGGAGCTGGAAGATGGTCGCAGTGAAACGGTGGATTGCCTGATTTGGGCGATTGGTCGCGAGCCTGCCAATGGCAACATCAACCTGGAAGCCGCTGGCGTTAAAACTAAAGAAAAAgg > 1:1378/1‑251 (MQ=255) cgccgcTGCGCAGCTTCGACCCGATGATTTCCGAAACGCTGGTCGAAGTGATGAACGCCGAAGGCCCGCATCTGCACACCAACGCCATCCCGAAAGCGGTAGTGAAAAATACCGATGGTAGCCTGACGCTGGAGCTGGAAGATGGTCGCAGTGAAACGGTGGATTGCCTGATTTGGGCGATTGGTCGCGAGCCTGCCAATGACAACATCAACCTGGAAGCCGCTGGCGTTAAAACTAACGAAAAAGGCtat > 1:155965/1‑251 (MQ=255) cgccgcTGCGCAGCTTCGACCCGATGATTTCCGAAACGCTGGTCGAAGTGATGAACGCCGAAGGCACGCATCTGCACACCAACGCCATCCCGACAGCGGTAGTGAAAAATACCGATGGTAGCCTGACGCTGGAGCTGGAAGATGGTCGCAGTGAAACGGGGGATTGCCTGCTTTGGGCGATTGGTCGCGAGCCTGCCAAGGACAACATCAACCTGGAAGCCGCAGGCGTTAAACCTAACGAAAAAGGCtat > 2:185123/1‑251 (MQ=255) gACCCGCTGATTTCCGAAACGCTGGTCGAAGTGATGAACGCCGAAGGCCCGCATCTGCACACCAACGCCATCCCGAAAGCGGTATTGAAAAATACCGATGGTAGCCTGACGCTGGAGCTGGAAGATGGTCGCAGTGAAACGGTGGATTGCCTGATTTGGGCGATTGGTCGCTAGCCTGCCAATGACAACATCAACCTGGAAGCCGCTGGCGTTAAAACTAACGAAAAATGCTATATCGTCGTCGATAAata < 2:155965/251‑1 (MQ=255) gACCCGATGATTTCCGAAACGCTGGTCGAAGTGATGAACGCCGAAGGCCCGCATCTGCACACCAACGCCATCCCGAAAGCGGTAGTGAAAAATACCGATGGTAGCCTGACGCTGGAGCTGGAAGATGGTCGCAGTGAAACGGTGGATTGCCTGATTTGGGCGATTGGTCGCGAGCCTGCCAATGACAACATCAACCTGGAAGCCGCTGGCGTTAAAACTAACGAAAAAGGCTATATCGTCGTCGATAAat > 1:379783/1‑250 (MQ=255) cGATGATTTCCGAAACGCTGGTCGAAGTGATGAACGCCGAAGGCCCGCATCTGCACACCAACGCCATCCCGAAAGCGGTAGTGAAAAATACCGATGGTAGCCTGACGCTGGAGCTGGAAGATGGTCGCAGTGAAACGGTGGATTGCCTGATTTGGGCGATTGGTAGCGAGCCTGCCAATGACAACATCAACCTGGAAGACGCTGGCGTTAAAACTAACGAAAAAGGCTATATCGTCGTCGATAAATATCa > 1:144118/1‑250 (MQ=255) atTTCCGAAACGCTGGTCGAAGTGATGAACGCCGAAGGCCCGCATCTGCACACCAACGCCATCCCGAAAGCGGTAGTGAAAAATACCGATGGTAGCCTGACGCTGGAGCTGGAAGATGGTCGCAGTGAAACGGTGGATTGCCTGATTTGGGCGATTGGTCGCGAGCCTGCCAATGACAACATCAACCTGGAAGCCGCTGGCGTTAAAACTAACGAAAAAGGCTATATCGTCGTCGATAAATATCAAAacac > 1:259043/1‑251 (MQ=255) tttCCGAAACGCTGGTCGAAGTGATGAACGCCGAAGGCCCGCAGCTGCACACCAACGCCATCCCGAGAGCGGTAGTGAAAAATACCGCTGGTAGCCTGACGCTGGAGCTGGAAGATGGTCGCAGTGAAACGGTGGATTGCCTGATTTGGGCGATTGGTCGCGAGCCTGCCAATGACAACATCAACCTGGAAGCCGCTGGCGTTAAAACTAACGAAAAAGGCTATATCGTCGTCGATAAATATCAAAACAcc > 2:160927/1‑251 (MQ=255) ggTCGAAGTGATGAACGCCGAAGGCCCGCATCTGCACACCAACGCCATCCCGAAAGCGGTAGTGAAAAATACCGATGGTAGCCTGACGCTGGAGCTGGAAGATGGTCGCAGTGAAACGGTGGATTGCCTGATTTGGGCGATTGGTCGCGAGCCTGCCAATGACAACATCAACCTGGAAGCCGCTGGCGTTAAAACTAACGAAAAAGGCTATATCGTCGTCGATAAATATCAAAACACCAATATTGAAGGt > 1:315717/1‑250 (MQ=255) gAAGTGATGAACGCCGAAGGTCCGCATCTGCACACCAACGCCATCCCGAAAGCGGTAGTGAAAAATACCGATGGTAGCCTGACGCTGGAGCTGGAAGATGGTCGCAGTGAAACGGTGGATTGCCTGATTTGGGCGATTGGTCGCGAGCCTGCCAATGACAACATCAACCTGGAAGCCGCTGGCGTTAAAACTAACGAAAAAGGCTATATCGTCGTCGATAAATATCAAAACACCAATATTGAAGGTATTTa < 1:296269/251‑1 (MQ=255) gaACGACGAAGGACCGCATCTGCACACCAACGCCATCCCGAAAGCGGTAGTGAAAAATACCGATGGTAGCCTGACGCTGGAGCTGGAAGATGGTCGCAGTGAAACGGTGGATTGCCTGATTTGGGCGATTGGTCGCGAGCCTGCCAATGACAACATCAACCTGGAAGCCGCTGGCGTTAAAACTAACGAAAAAGGCTATATCGTCGTCGCTAAATATCAAAACACCTATATTGAAGGTATTTACGCGGTgg > 1:77217/1‑251 (MQ=255) gCCGAAGGCCCGCATCTGCACACCCACGCCATCCCGAAAGCGGTAGTGCAAAATCCCGATGGTAGCCTGACGCTGGAGCTGGAAGATGGTCGCAGTGACACGGTGGATTGCCTGCATTGGGCGATTGGTCGCGAGCCTGCCACTGACAACATCACCCTGGAAGCCGCTGGCGTTAAAACTACCGAAAAAGGCTATATCGTCGTCGATAAATATCAAAaca > 2:175259/1‑220 (MQ=255) gCCGAAGGCCCGCATCTGCACACCAACGCCATCCCGAAAGCGGTAGTGAAAAATACCGATGGTAGCCTGACGCTGGAGCTGGAAGATGGTCGCAGTGAAACGGTGGATTGCCTGATTTGGGCGATTGGTCGCGAGCCTGCCAATGACAACATCAACCTGGAAGCCGCTGGCGTTAAAACTAACGAAAAAGGCTATATCGTCGTCGATAAATATCAAAaca < 1:175259/220‑1 (MQ=255) | ACCCGGATATTCCGGGCGTGGAATACGGTATTGATTCTGATGGCTTCTTCGCCCTTCCTGCTTTGCCAGAGCGCGTGGCGGTTGTTGGCGCGGGTTACATCGCCGTTGAGCTGGCGGGCGTGATTAACGGCCTCGGCGCGAAAACGCATCT‑GTTTGTGCGTAAACATGCGCCGCTGCGCAGCTTCGACCCGATGATTTCCGAAACGCTGGTCGAAGTGATGAACGCCGAAGGCCCGCAGCTGCACACCAACGCCATCCCGAAAGCGGTAGTGAAAAATACCGATGGTAGCCTGACGCTGGAGCTGGAAGATGGTCGCAGTGAAACGGTGGATTGCCTGATTTGGGCGATTGGTCGCGAGCCTGCCAATGACAACATCAACCTGGAAGCCGCTGGCGTTAAAACTAACGAAAAAGGCTATATCGTCGTCGATAAATATCAAAACACCAATATTGAAGGTATTTACGCGGTGG > NC_000913/3646732‑3647202 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |