| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,279,276 | C→G | F121L (TTC→TTG) | kbaZ → | putative tagatose‑1,6‑bisphosphate aldolase 1 chaperone |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,279,276 | 0 | C | G | 90.3% | 80.0 / ‑5.5 | 33 | F121L (TTC→TTG) | kbaZ | putative tagatose‑1,6‑bisphosphate aldolase 1 chaperone |
| Reads supporting (aligned to +/- strand): ref base C (0/1); major base G (14/14); minor base T (1/2); total (16/17) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AACCAAACGCCGTTACTGATTGAAGCAACCTCCAATCAGGTAGACCAGTTCGGCGGTTATACCGGAAT‑GACGCCCGCCGATTTTCGCGGCTTTGTTTGTCAGCTCGCCGACTCGTTGAATTTCCCGCAGGATGCGTTGATTCTGGGTGGTGACCATCTGGGGCCAAACCGCTGGCAAAACCTGCCGGCCGCTCAGGCAATGGCCAATGCCGATGATTTGATTAAAAGCTACGTTGCGGCAGGATTCAAAAAAATCCACCTTGATTGCAGCATGTCCTGTCAGGACGATCCGATTCCCTTAACTGATGACATCGTGGCTGAACGCGCCGCCCGTCTGGCGAAAGTGGCGGAAGAAACCTGTCTTGAACACTTTGGCGAAGCCGATCTGGAGTATGTCATTGGTACCGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGGATGCCGCCCGCGCCACGCTGGAAGC > NC_000913/3279031‑3279521 | aacaaaacGCCGTTACTGATTAAAGCAACCTCCAATCAGTGAGCCCGGTGCGGCGGTTATCCCGTAAT‑GACGCCCGCCGATTTTCGCGGCTTTGTTTGTCAGCTCGCCGACTCGTTGAATTTCCCGCAGGATGCGTTGATTCTGGGTGGTGACCATCTGGGGCCAAACCGCTGGCAAAACCTGCCGGCCGCTCAGGCAATGGCCAATGCCGATGATTTGATTAAAAGCTACGTTGCTGCAGGATTGaaaaa < 1:291245/247‑1 (MQ=255) gCCGGTACTGATTGAAGAACCCTCCAATCAGGTAGACCAGGCGGGCGTTTATACCGGAAT‑GACGTCCGCCGATTTTCGCGGCTTTGTTTGTCAGCTCGCCGACTCGTTGAATTTCCCGCAGGATGCGTTGATTCTGGGTGGTGACCATCTGGGGCCAAACCGCTGGCAAAACCTGCCGGCCGCTCAGGCAATGGCCAATGCCGATGATTTGATTAAAAGCTACGTTGCGGCAGGATTGAAAAAAATCCAcc < 1:268395/251‑1 (MQ=255) ttattgtcggAAGCACCCTCAAATCAGGGAGTCAGGTTCGGCGGTTATAC‑AGATTCGACACCCGCCGATTTTCGCGGCTTTGTTTGTCAGCTCGCCGACTCGTTGAATTTCCCGCAGGATGCGTTGATTCTGGGTGGTGACCATCTGGGGCCAAACCGCTGGCAAAACCTGCCGGCCGCTCAGGCAATGGCCAATGCCGATGATTTGATTAAAAGCTACGTTGCGGCAGGATTGAAAAAAATCCACCTTg < 2:303807/241‑1 (MQ=255) tACTGATTGAAGCAACCTCCAATCAGGTAGACCAGTTCGGCGGTTATAACGGAAT‑GACGCCCGCCGATTTTCGCGGCCTTGTTTGTCAGCTCGCCGACCCGTTGCATTTCCCGCAGGATGCGTTGATTCTGGGGGGTGACCCTCTGGGGCCAAACCGCTGGCAAAACCTGCCGGCCGCTCAGGCAATGGCCCATGCCGATGATTTTATTAAAAGCTACGTTGCGGCCGGGTTTGAAAAAATCCACCTTGAt > 1:364840/1‑251 (MQ=255) aacgaggaaGACTAGTTGGGCGTTTATACCGGAAT‑GGCGCCCGCCGATTTTCGCGGCTTTGTTTGTCAGCTCGCCGACTCGTTGAATTTCCCGCAGGATGCGTTGATTCTGGGTGGTGACCATCTGGGGCCAAACCGCTGGCAAAACCTGCCGGCCGCTCAGGCAATGGCCAATGCCGATGATTTGATTAAAAGCTACGTTGCGGCAGGATTGAAAAAAATCCACCTTGATTGCAGCATGTCCTGTCAGGa < 1:163975/243‑1 (MQ=255) ggAAT‑GACGCCCGCCGATTTTCGCGGCTTTGTTTGTCAGCTCGCCGACTCGTTGAATTTCCCGCAGGATGCGTTGATTCTGGGTGGTGACCATCTGGGGCCAAACCGCTGGCAAAACCTGCCGGCCGCTCAGGCAATGGCCAATGCCGATGATTTGATTAAAAGCCACGTTGCGGCAGGATTGAAAAAAATCCACCTTGATTGCAGCATGTCCTGTCAGGACGATCCGATTCCCTTAACTGATGACATCgg > 1:179449/1‑250 (MQ=255) gccgATTTTCGCGGCTTTGTTTGTCAGCTCGCCGACTCGTTGAATTTCCCGCAGGATGCGTTGATTCTGGGTGGTGACCATCTGGGGCCAAACCGCTGGCAAAACCTGCCGGCCGCTCAGGCAATGGCCAATGCCGATGATTTGATTAAAAGCTACGTTGCGGCAGGATTGAAAAAAATCCACCTTGATTGCAGCATGTCCTGTCAGGACGATCCGATTCCCTTAACTGATGACATCGTGGCTGAAccagc > 1:112754/1‑247 (MQ=255) gCTTTTTTTGTCAGCTCGCCGACTCGTTGAATTTCCCGCAGGATGCGGTGATTCTGGGTGTTGACCATCTGGGGCCAAACCGCTGGCAAAACCTGCCGGCCGCTCAGGCAATGGCCAATGCCGATGATTTGATTAAAAGCTACGTTGCGGCAGGATTGAAAAAAATCCACCTTGATTGCAGCATGTCCTGTCAGGACGATCCGATTCCCTTAACTGATGACATCGTGGCTGAACGCGCCGCCCGTCTGGCg < 1:325117/251‑1 (MQ=255) cTTTGTTTGTCAGCTCGCCGACTCGTTGAATTTCCCGCAGGATGCGTTGATTCTGGGTGGTGACCATCTGGGGCCAAACCGCTGGCAAAACCTGCCGGCCGCTCAGGCAATGGCCAATGCCGATGATTTGATTAAAAGCTACGTTGCGGCAGGATTGAAAAAAATCAACCTTTCTTGCAGCATGTCCTGTCAGGACGGTCCGATTCCCTTAACTGTTGACCTCGTGGCTGAACGCGCCGCCCGTCTggggg > 2:195334/1‑248 (MQ=255) gggttttagttCGCCGACTCGTTTATTTTCCCGTAGGATTCGTTGAGGCTGGGTGGTGTCCTTCTGGGTCCAAACCGCGTGCAGATCCTGCCGGCCGCTCAGGCACTGGCCAATGCCTATGCTGTGTGTAAAAGCTACGTTGCGGCAGGATTGAAAAAAATCCGCCTTGATTTCATCATGTCCTGTCAGGACGATCCGATTCCCTTAACGGATGACATCGTGGCTGTCCGCGCCGTCCGTCTGGCTAAAg < 2:235227/240‑1 (MQ=255) tgtCAGCTCGCCGACTCGTTGAATTTCCCGCAGGATGCGTTGATTCTGGGTGGTGACCATCTGGGGCCAAACCGCTGGCCAAAACTGCCGGCAGCTCAGGCAATGGCCAATGCCGATGATTTGATTAAAAGCTACGTTGCGGCAGGATTGAAAAAAATCCACCTTGATTGCAGCATGTCCTGTCAGGACGATCCGATTCCCTTAACTGATGACATCGTGGCTGAACGCGCCGCCCGTCTGGCGAAAGTGGc > 1:26900/1‑251 (MQ=255) cAGCTCGCCGACTCGTTGAATTTCCCGCAGGATGCGTTGATTCTGGGTGGTGACCATCTGGGGCCAAACCGCTGGCAAAACATGCCGGCCGCTCAGGCAATGGCCAATGCCGATGATTTGATTAAAAGCTACGTTGCGGCAGGATTAAAAAAAACTCAACTTAATTGAAACATGTCCTTTCAGGCAGGGCCGATTCCCTAAACTGATGTCATCGTTGCTGTACACGCCGCCCGTCTGGCGAAAgagacggg > 2:260929/1‑244 (MQ=255) cGCCGACTCGTTGAATTTCCCGCAGGATGCGTTGATTCTGGGTGGTGACCATCTGGGGCCAAACCGCTGGCAAAACCTGCCGGCCGCTCAGGCAATGGCCAATGCCGATGATTTGATTAAAAGCTACGTTGCGGCAGGATTGAAAAAAATCCACCTTGATTGCAGCATGTCCTGTCAGGACGATCCGATTCCCTTAACTGATGACATCGTGGCTGAACGCGCCGCCCGTCTGGCGAAAGTGGCGgaagaa < 1:370/250‑1 (MQ=255) gTTGAATTCACCGCAGGATGCGTGGATGCTGGGTGGTGTCCAGCTGGGGCCAAACCGCTGGCAAAACCTGCCGGCCGCTCAGGAAATGGCCAATGCCGATGATTTGATTAAAAGCTACGTTGCGGCAGGATTGAAAAAAATCCACCTTGATTGCAGCATGTCCTGTCAGGACGATCCGATTCCCTTAACTGAGGACATCGTGGCTGAACGCGCCGCCCGTCTGGCGAAAGTGGCGGAAGAAACCTGTCTTg < 2:116840/251‑1 (MQ=255) cccGCAGGATGCGTTGATTCTGGGTGGTGACCATCTGGGGCCAAACCGCTGGCAAAACCTGCCGGCCGCTCAGGCAATGGCCAATGCCGATGATTTGATTAAAAGCTACGTTGCGGCAGGATTGAAAAAAATCCACCTTGATTGCAGCATGTCCTGTCAGGACGATCCGATTCCCTTAACTGATGACATCGTGGCTGAACGCGCCGCCCGTCTGGCGAAAGTGGCGGAAGAAACCTGTCTTGAACACTTTg < 1:189335/251‑1 (MQ=255) aGGATGCGTTGATTCTGGGTGGTGACCATCTGGGGCCAAACCGCTGGCAAAACCTGCCGGCCGCTCAGGCAATGGCCAATGCCGATGATTTGATTAAAAGCTACGTTGCGGCAGGATTGAAAAAAATCCACCTTGATTGCAGCATGTCCTGTCAGGACGATCCGATTCCCTTAACTGATGACATCGTGGCTGAACGCGCCGCCCGTCTGGCTAAAGTGGCGGAAGAAACCTGTCTTTAACACTTTGGCGa > 1:11648/1‑250 (MQ=255) ggATGCGTTGATTCTGGGTGGTGACCATCTGGGGCCAAACCGCTGGCAAAACCTGCCGGACGCTCAGGCAATGGCCAATGCCGATGATTTGATTAAAAGCTACGTTGCGGCAGGATTGAAAAAAATCCACCTTGATTGCAGCATGTCCTGTCAGGACGATCCGATTCCCTTAACTGATGACATCGTGGCTGAACGCGCCGCCCGTCTGGCGAAAGTGGCGGAAGAAAACTGTATTGAACACTTTGGCGa > 1:239043/1‑249 (MQ=255) ttGATTCTGGGTGGTGACCATCTGGGTCCAAACCGCTGGCAAAACCTGCCTGCCGCTCAGGCAATGGCCAATGCCGATGATTTGATTAAAAGCTACGTTGCGGCAGGATTGAAAAAAATCCACCTTGATTGCAGCATGTCCTGTCAGGACGATCCGATTCCCTTAACTGATGACATCGTGGCTGAACGCGCCGCCCGTCTGGCGAAAGTGGCGGAAGAAACCTTACTTGAACCCTTTGGCGAAGCCGATCt > 1:14298/1‑251 (MQ=255) gtgACCATCTGGGGCCAAACCGCTGGCAAAACCTGCCGGCCGCTCAGGCAATGGCCAATGCCGATGATTTGATTAAAAGCTACGTTGCGGCAGGATTGAAAAAAATCCACCTTGATTGCAGCATGTCCTGTCAGGACGATCCGATTCCCTTAACTGATGACATCGTGGCTGAACGCGCCGCCCGTCTGGCGAAAGTGGCGGAAGAAACCTGTCTTGAACACTTTGGCGAAGCCGATCTGGAGTATGTCAtt < 1:287641/251‑1 (MQ=255) ccATCTGGGGCCAAACCGCTGGCAAAACCTGCCGGCCGCTCAGGCAATGGCCAATGCCGATGATTTGATTAAAAGCTACGTTGCGGCAGGATTGAAAAAAATCCACCTTGATTGCAGCATGTCCTGTCAGGACGATCCGATTCCCTTAACTGATGACATCGTGGCTGAACGCGCCGCCCGTCTGGCGAAAGTGGCGGAAGAAACCTGTCTTGAACACTTTGGCGAAGCCGATCTGGAGTATGTCATTGGTa < 1:211956/251‑1 (MQ=255) cATCTGGGGCCAAACCGCTGGCAAAACCTGCCGGCCGCTCAGGCAATGGCCAATGCCGATGATTTGATTAAAAGCTACGTTGCGGCAGGATTGAAAAAAATCCACCTTGATTGCAGCATGTCCTGTCAGGACGATCCGATTCCCTTAACTGATGACATCGTGGCTGAAAGCGCCGCCCGTCTGGCGAAAGTGGCGGAAGAAACCTGTCTTTAACACTTTGGCGAAGCCGATCTTGAGAATTTCATTGGTAc > 1:268843/1‑251 (MQ=255) gggCCAAACCGCTGGCAAAACCTGCCGGCCGCTGAGGCAATAGCCAATGCCGATGATTTGACTAAAAGCTACGATGCCGCAGGCTTGAAAAAACTCCACCTTGTTTGCCGCATTACCTGTTAGGACGCTCCGATCCCCCTAAATGATGACATCGTGGCTGTACGCGCCGCCCGCCTGGCGAACGTGGCGGAAGAAACCTGCCTTGAACACTCAGGAGAAGCCGCACTGGGGTACGTAATTGGTaatgaatg > 1:156587/1‑244 (MQ=255) gCTGTCAAAACCGGGCGGCCGCTCGGGAAATGGCCAATGCCGATGATTTGATTAAAAGCTACGTTGCGGCAGGATTGAAAAAAATCCACCTTGATTGCAGCATGTCCTGTCAGGACGATCCGAGTCCCTTAACTGATGACATCGTGGCTGAACGCGCCGCCCGTCTGGCGAAAGTGGCGGAAGAAACCTGTCCTGAACACTTTGGCGAAGCCGATCTGGAGTATGTCATTGGTACCGAAGTGCCGGTACCt < 2:354060/251‑1 (MQ=255) cTGCCGGCCGCTCAGGCAATGGCCAATGCCGATGATTTGATTAAAAGCTACGTTGCGGCAGGATTGAAAAAAATCCACCTTGATTGCAGCATGTCCTGTCAGGACGATCCGATTCCCTTAACTGATGACATCGTGGCTGAACGCGCCGCCCGTCTGGCGAAAGGGGCGGAAGAAAACTGTCTTGAACACTTTGGCGAAGCCGATCTGGAGTATGTCATTGGTACCGAAGAGGCGGGACCTGGCGgcgcgc > 1:96696/1‑250 (MQ=255) gCAATGGCAAATACCGCTGGTTTGATTTAAAGCTACGTTGCGGCATGATTGAAAAAAAGCCCCCGTGATGGCATCATGTCCTCTCAGGACGCTCCGATTCCATTAACGGATGACAACGTGGCTGAACGCGCCGTCCGGCTAGTGAAGGTTGCGGAAGAAACCTGTCGTGAACGCTTTGGCGGAGCCGATCTGGAGTATGTCATTGGTACCGAAGTGCCGTTACCTGGCTGCGCTCATGAAACCTTAAGCGa < 2:269904/251‑1 (MQ=255) atggacactgctgattatttgatgACAAGCGACGTGGCGGCAGGATATAATAACATCCACCCGGACTGCAGCAGGTCCGTTCAGGACGCTCTGATTCGCTTAACTGATGACATAGTGGCTGAACGCGCAGCCCGTCTGGCGAAAGTGGCGGAAGAAACCTGTCTTGCACATTTTGGCTAAGCCGATCTGGAGTATGTCTTTGGTACCGAACTGCCTGTACCTGGCGGCGAGCATCAAACCTTAAGCGAgat < 2:255167/235‑3 (MQ=255) aTGGCCAATGCCGATGATTTGATTAAAAGCTACGTTGCGGCAGGATTGAAAAAAATCCAACTTGATTGCAGCATGTCCTGTCAGGACGATCCGATTCCCTTAACTGATGACATCGTGGCTGAACGCGCCGCCCGTCTGGCGAAAGTGGCGGAAGAAAACTGTCTTGAACACTTTGGCGAAACCGATCTTGAGGATGTCATTGGTACCGAAGAGCCGGGACCTTGCGGCGGGCATGAAACCTTAAACGAGCt > 1:277191/1‑251 (MQ=255) tGGCCAATGCCGATGATTTGATTAAAAGCTACGTTGCGGCAGGATTGAAAAAAATCCACCTTGATTGCAGCATGTCCTGTCAGGACGATCCGATTCCCTTAACTGATGACATCGTGGCTGAACGCGCCGCCCGTCTGGCGAAAGTGGCGGAAGAAACCTGTCTTGAACCCTTTGGCGAAGCCGATCTGGAGAATGTCATTGGTACCGCAGTGCCGGTACCTTGCGGGGGGCATGAAACCTTTAGCGGGCTg > 1:218779/1‑251 (MQ=255) ccAATGCCGATGATTTGATTAAAAGCTACGTTGCGGCAGGATTCAAAAAAATCCACCTTGATTGCAGCATGTCCTGTCAGGACGATCCGATTCCCTTAACTGATGACATCGTGGCTGAACGCGCCGCCCGTCTGGCGAAAGTGGCGGAAGAAACCTGTCTTGAACACTTTGGCGAAGCCGATCTGGAGTATGTCATTGGTACCGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCg < 1:118399/251‑1 (MQ=255) aTGCCGATGATTTGATTAAAAGCTACGTTGCGGCAGGATTGAAAAAAATCCACCTTGATTGCAGCATGTCCTGTCAGGACGATCCGATTCCCTTAACTGATGACATCGTGGCTGAACGCGCCGCCCGTCTGGCGAAAGTGGCGGAAGAAACCTGTCTTGAACACTTTGGCGAAGCCGATCTGGAGTATGTCATTGGTACCGAAGTGCCGGTACCTGGCGGCGCGCCTGAAACCTTAACCGAGCTGGCgggc > 1:259613/1‑249 (MQ=255) ttAAAA‑CTACGTTGCGGCAGGATTTAAAAAAACCCCCCGTGATTGCATCAGGTCCTGTCAGGACGATCCGATTCCCTTAACTGATTACATCGTGGCTGAACGCGCCGCCCGTCTGGCGAAAGTGGCGGAAGAACCCTGTCTTGAACACTTGGGCGAAGCCGATCTGGAGTATGTCATTGGTACCGAAGTGACGGTACCTGTCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGGATgca < 2:289162/250‑2 (MQ=255) gCAGGATTGAAAAAAATCCACCTTGATTGCAGCATGTCCTGTCAGGACGATCCGATTCCCTTAACTGATGACATCGTGGCTGAACGCGCCGCCCGTCTGGCGAAAGTGGCGGAAGAAACCTGTCTTGAACACTTTGGCGAAGCCGATCTGGAGTATGTCATTGGTACCGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGGATGCCGCCCGCGCCCCGCTgg > 1:32929/1‑250 (MQ=255) ggATTGAAAAAAATCCACCTTGATTGCAGCATGTCCTGTCAGGACGATCCGATTCCCTTAACTGATGACATCGTGGCTGAACGCGCCGCCCGTCTGGCGAAAGTGGCGGAAGAAACCTGTCTTGAACACTTTGGCGAAGCCGATCTGGAGTATGTCATTGGTACCGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGGATGCCGCCCGCGCCACGCTGGAAGc < 1:163042/251‑1 (MQ=255) | AACCAAACGCCGTTACTGATTGAAGCAACCTCCAATCAGGTAGACCAGTTCGGCGGTTATACCGGAAT‑GACGCCCGCCGATTTTCGCGGCTTTGTTTGTCAGCTCGCCGACTCGTTGAATTTCCCGCAGGATGCGTTGATTCTGGGTGGTGACCATCTGGGGCCAAACCGCTGGCAAAACCTGCCGGCCGCTCAGGCAATGGCCAATGCCGATGATTTGATTAAAAGCTACGTTGCGGCAGGATTCAAAAAAATCCACCTTGATTGCAGCATGTCCTGTCAGGACGATCCGATTCCCTTAACTGATGACATCGTGGCTGAACGCGCCGCCCGTCTGGCGAAAGTGGCGGAAGAAACCTGTCTTGAACACTTTGGCGAAGCCGATCTGGAGTATGTCATTGGTACCGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGGATGCCGCCCGCGCCACGCTGGAAGC > NC_000913/3279031‑3279521 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |