| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 26,534 | T→C | S86S (AGT→AGC) | ispH → | 4‑hydroxy‑3‑methylbut‑2‑enyl diphosphate reductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 26,534 | 0 | T | C | 95.2% | 103.8 / ‑3.7 | 42 | S86S (AGT→AGC) | ispH | 4‑hydroxy‑3‑methylbut‑2‑enyl diphosphate reductase |
| Reads supporting (aligned to +/- strand): ref base T (2/0); new base C (23/17); total (25/17) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.06e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.10e-01 | |||||||||||
GTTGGCCAACCCGCGTGGTTTTTGTGCCGGGGTAGACCGCGCTATCAGCATTGTTGAAAACGCGCTGGCCATTTACGGCGCACCGATATATGTCCGTCACGAAGTGGTACATAACCGCTATGTGGTCGATAGCTTGCGTGAGCGTGGGGCTATCTTTATTGAGCAGATTAGCGAAGTACCGGACGGCGCGATCCTGATTTTCTCCGCACACGGTGTTTCTCAGGCGGTACGTAACGAAGCAAAAAGTCGCGATTTGACGGTGT‑TTGATGCCACCTGT‑CCGCTGGTGACCAAAGTGCATATGGAAGTCGCCCGCGCCAGTCGCCGTGGCGAAGAATCTATTCTCATCGGTCACGCCGGGCACCCGGAAGTGGAAGGGACAATGGGCCAGTACAGTAACCCGGAAGGGGGAATGTATCTGGTCGAATCGCCGGACGATGTGTGGAAACTGACGGTCAAAAACGAAGAGAAGCTCTCCTTTATGA > NC_000913/26288‑26769 | gtttgCCAACCCGGGGGGTTTTTTTGCCGGGGTATCCCGCGCTATCAGCATTGTTGAAAACGCGCTGGCCATTTACGGCGCACCGATATATGTCCGTCACTAAGTGGTACATAACCGCTATGTGGTCGATAGCTTGCGTGAGCGTGGGGCTATCTTTATTGAGCAGATTAGCGAAGTACCGGACGGCGCGATCCTGATTTTCTCCGCACACGGTGTTTCTCAGGCGGTACGTAACGAAGCAAAAAGCcgcg < 2:314251/247‑1 (MQ=255) gcgTGGTTTTTGTGCCGGGGTAGACCGCGCTATCAGCATTGTTGAAAACGCGCTGGCCATTTACGGCGCACCGATATATGTCCGTCACGAAGTGGTACATAACCGCTATGTGGTCGATAGCTTGCGTGAGCGTGGGGCTATCTTTATTGAGCAGATTAGCGAAGTACCGGACGGCGCGATCCTGATTTTCTCCGCACACGGTGTTTCTCAGGCGGTACGTAACGAAGCAAAAAGCCGCGATTTGACGgtgt > 1:85968/1‑251 (MQ=255) tATCAGCATTATTGAAAACACACTGGCCATTTACGCCGCACCGATATATGTCCGTAACGAAGTGGTACATAACCGCTATGTGGTCGGTAGCATGCGTGAGCGTGGGGCTATCTTTATTGAGCAGATTAGCGACGTACCGGACGGCGCGATCCTGATTTTATCCGCACCCGGTGATTCTCAGGCGGTACGTAACGATGCAAAAAGCCGAGATTTGACGGTGT‑TTGATGCCAGCTGT‑CCGCAGGTGACCaaa > 2:163117/1‑250 (MQ=255) aaCGCGCTGGCCATTTACGGCGCACCGATATATGTCCGTCACGAAGTGGTACATAACCGCTATGTGGTCGATAGCTTGCGTGAGCGTGGGGCTATCTTTATTGAGCAGATTAGCGAAGTACCGGACGGCGCGATCCTGATTTTCTCCGCACACGGTGTTTCTCAGGCGGTACGTAACGAAGCAAAAAGCCGCGATTTGACGGTGT‑TTGATGCCACCTGT‑CCGCTGGTGACCAAAGTGCATATGGAAGTCGc < 1:41269/251‑1 (MQ=255) cgcTGGCCATTTACGGCGCACCGATATATGTCCGTCACGAAGTGGTACATAACCGCTCTGTGGTCGATAGCTTGCGTGAGCGTGGGGCTATCTTTATTGAGCAGATTAGCGAAGTACCGGACGGCGCGATCCTGATTTTCTCCGCACACGGTGTTTCTCAGGCGGTACGTAACGAAGCAAAAAGCCGCGATTTGACGGAGT‑TTGATGCCACCTGT‑CCGCTGGTGACCAAGGTGCATCTGGAAGTCGCCcgg > 2:339434/1‑250 (MQ=255) cATTTACGGCGCACCGATATATGCCCGTCACGAAGTGGTACATAACCGCTATGTGGTCGATAGCTTGCGTGAGCGTGGGGCTATCTTTATTGAGCAGATTAGCGAAGTACCGGACGGCGCGATCCTGATTTTCTCCGCACACGGTGTTTCTCAGGCGGTACGTAACGAAGCAAAAAGCCGAGATTTGACGGTGT‑TTGATGCCACCTGT‑CCGCTGGTGACCAAAGTGCATATGGAAGTCGCCCGCGCCAgcc > 1:238330/1‑249 (MQ=255) tgcgcATCGATATATGGCCGTCACGAAGTGGTACATAACCGCTATGTGGTCGATAGCTTGCGTGAGCGTGGGGCTATCTTTATTGAGCAGATTAGTGAAGTACCGGACGGCGCGATCCTTAGTTTCTCCGCACACGGTGTTTCTCAGGCGGTTCTTAACGAAGCAAAAAGCCGCGATTTGACGgt < 2:214820/184‑1 (MQ=255) ggCGCACCGATATATGTCCGTCACGAAGTGGTACATAACCGCTATGTGGTCGATAGCTTGCGTGAGCGTGGGGCTATCTTTATTGAGCAGATTAGCGAAGTACCGGACGGCGCGATCCTGATTTTCTCCGCACACGGTGTTTCTCAGGCGGTACGTAACGAAGCAAAAAGCCGCGATTTGACGgt > 1:214820/1‑185 (MQ=255) aCCGATATATGTCCGTCACGAAGTGGTACATAACCGCTATGTGGTCGATAGCTTGCGTGAGCGTGGGGCTATATTTATTGAGCAGATTAGCGAAGTACCGGACGGCGCGATCCTGATTTTCTCCGCACACGGTGTTTCTCAGGCGGTACGTAACGAAGCAAAAAGTCACGATTTGACGGTGT‑TTGATGCCACCTGC‑CCGCTGGTGCCCAACGAGCATATGGAAGTCGCCCGCGCCATTCGCCGTGGCga > 2:103871/1‑249 (MQ=255) gATATATGTCCGTCACGAAGTGGTACATAACCGCTATGTGGTCGATAGCTTGCGTGAGCGTGGGGCTATCTTTATTGAGCAGATTAGCGAAGTACCGGACGGCGCGATCCTGATTTTCTCCGCACACGGTGTTTCTCAGGCGGTACGTAACGAAGCAAAAAGCCGCGATTTGACGGTGT‑TTGATGCCACCTGT‑CCGCTGGTGACCAAAGTGCATATGGAAGTCGCCCGCGCCAGCCGTCGTGGCgcagcgt > 1:249332/1‑245 (MQ=255) gTCCGTCACGAAGTGGTACATAACCGCTATGTGGTCGATAGCTTGCGTGAGCGTGGGGCTATCTTTATTGAGCAGATTAGCGAAGTACCGGACGGCGCGATCCTGATTTTCTCCGCACACGGTGTTTCTCAGGCGGTACGTAACGAAGCAAAAAGCCGCGATTTGACGGTGT‑TTGATGCCACCTGT‑CCGCTGGTGACCAAAGTGCATATGGAAGTCGCCCGCGCCAGCCGTCGTGGCGAAGAGTCGATtct > 1:143707/1‑251 (MQ=255) gTACATAACCGCTATGTGGTCGATAGCTTGCGTGAGCGTGGGGCTATCTTTATTGAGCAGATTAGCGAAGTACCGGACGGCGCGATCCTGATTTTCTCCGCACACGGTGTTTCTCAGGCGGTACGTAACGAAGCAAAAAGCCGCGATTTGACGGTGT‑TTGATGCCACCTGT‑CCGCTGGTGACCAAAGTGCATATGGAAGTCGCCCGCGCCAGCCGTCGTGGCGAAGAGTCGATTCTCATCGGCCACGCCgg > 1:254319/1‑251 (MQ=255) aaCCGCTATGTGGTCGATAGCTTGCGTGAGCGTGGGGCTATCTTTATTGAGCAGATTAGCGAAGTACCGGACTGCGCGATCCTGATTTTCTCCGCACACGGTGTTTCTCAGGCGGTACGTAACGAATCAAAAAGCCGCGATTTGACGGTGT‑TTGATGCCACCTGT‑CCGCTGGTGACCAGAGTGCATATGGAAGTCGCCCGCGCCAGCCGTCGTGGCGAAGAGTCGAGTCTCATCGGCCACGCCGGGCatcc < 1:150993/251‑4 (MQ=255) cTATGTGGTCGATAGCTTGCGTGAGCGTGGGGCTCTCTTTATTGAGCAGATTAGCGAAGTACCGGACGGCGCGATCCTGATTTTCTCCGCACACGGTGTTTCTCAGGCGGTACGTAACGAAGCAAAACGCCGCGATTTGACGGTGT‑TTGATGCCACCTGT‑CCGCTGGTGACCAAAGTGCATATGGAAGTCGCCCGCGCCAGCCGTCGTGGCGAAGAGTCGGTTCTCATCGGCCACGCCGGGCATCCggc > 2:363155/1‑248 (MQ=255) tgtgGTCGATAGCTTGCGTGAGCGTGGGGCTATCTTTATTGAGCAGATTAGCGAAGTACCGGACGGCGCGATCCTGATTTTCTCCGCACACGGTGTTTCTCAGGCGGTACGTAACGAAGCAAAAAGCCGCGATTTGACGGTGT‑TTGATGCCACCTGT‑CCGCTGGTGACCAAAGTGCATATGGAAGTCGCCCGCGCCAGCCGTCGTGGCGAAGAGTCGATTCTCATCGGCCACGCCGGGCATCCGGAAGTgg > 1:303726/1‑251 (MQ=255) cGATAGCTTGCGTGAGCGTGGGGCTATCTTTATTGAGCAGATTAGCGAAGTACCGGACGGCGCGATCCTGATTTTCTCCGCACACGGTGTTTCTCAGGCGGTACGTAACGAAGCAAAAAGCCGCGATTTGACGGTGT‑TTGATGCCACCTGT‑CCGCTGGTGACCAAAGTGCATATGGAAGTCGCCCGCGCCAGCCGTCGTGGCGAAGAGTCGATTCTCATCGGCCACGCCGGGCATCCGGAAGTGGAAggta < 1:295588/251‑3 (MQ=255) gTGGGGCTATCTTTATTGAGCAGATTAGCGAAGTACCGGACGGCGCGATCCTGATTTTCTCCGCACACGGTGTTTCTCAGGCGGTACGTAACGAAGCAAAAAGCCGCGATTTGACGGTGT‑TTGATGCCACCTGT‑CCGCTGGTGACCAAAGTGCATATGGAAGTCGCCCGCGCCAGCCGTCGTGGCGAAGAGTCGATTCTCATCGGCCACGCCGGGCATCCGGAAGTGGAAGGTACGATGGGCcagtacagt > 1:225805/1‑251 (MQ=255) ccTTTATTGAGCAGATTCTCGAAGTACCGGGCTGCGCGATCATGATTTTCTCCGCACACCGTGGTTCTCAGGCCGTACGTACAGAAGCAAAAAGCCGTGATTGGCCGGTGT‑TCGATGCCACCTGT‑CCGCTGGTGACCAAAGTGCATATGGAATTCGCCCGCGCCAGCCGTCGTGGCGAAGAGTCGATTCTCATCGGCCACGCCGGGCATCCGGAAGTGGAATGTACGATGGGCCAGTACAGTAACCCGGaa < 1:255845/250‑1 (MQ=255) ttATAGAGCAGATTAGCGAAGTACCGGACTGCGCGATCCGGATTTTCTCCGCACACGGTGTTTCTCAGGCGGTACGTAACGAAGCAAAAAGCCGCGATTGTACGG‑GTGTTGATGCCACCTGT‑CCGCTGGTGACCAAAGTGCATATGGAAGTCGCCCGCGCCAGCCGTCGTGGCGAAGAGTCGATTCTCATCGGCCACGCAGGGCATCCGGAAGTGGAAGGTACGATGGGCCAGTACAGTAACCCGGAAgg < 2:113837/250‑1 (MQ=255) tGAGCAGATTAGCGAAGTACCGGACGGCGCGATCCTGATTTTCTCCGCACACGGTGTTTCTCAGGCGGTACGTAACGAAGCAAAAAGCCGCGATTTGACGGTGT‑TTGATGCCACCTGT‑CCGCTGGTGACCAAAGTGCATATGGAAGTCGCCCGCGCCAGCCGTCGTGGCGAAGAGTCGATTCTCATCGGCCACGCCGGGCATCCGGAAGTGGAAGGTACGATGGGCCAGTACAGTAACCCGGAAGGGGGa < 1:64902/250‑1 (MQ=255) gTACCGGACGGCGCGATCCTGATTTTCTCCGCACACGGTGTTTCTCAGGCGGTACGTAACGAAGCAAAAAGCCGCGATTTGACGGTGT‑TTGATGCCACCTGT‑CCGCTGGTGACCAAAGTGCATATGGAAGTCGCCCGCGCCAGCCGTCGTGGCGAAGAGTCGATTCTCATCGGCCACGCCGGGCATCCGGAAGTGGAAGGTACGATGGGCCAGTACAGTAACCCGGAAGGGGGAATGTATCTGGTCGAATc < 1:116129/251‑1 (MQ=255) cGGACGGCGCGATCCTGATTTTCTCCGCACACGGTGTTTCTCAGGCGGTACGTAACGAAGCAAAAAGCCGCGATTTGACGGTGT‑TTGATGCCACCTGT‑CCGCTGGTGACCAAAGTGCTTATGGAAGTCGCCCGCGCCAGCCGTCGTGGCGAAGAGTCGATTCTCATCGGCCACGCCGGGCATCCGGAAGTGGAAGGTACGATGGGCCAGTACAGTAACCCGGAAGGGGGAATGTATCTGGTCGAATCGCCg > 1:9277/1‑251 (MQ=255) cgATCCTGATTTTCTCCGCACACGGTGTTTCTCAGGCGGTACGTAACGAAGCAAAAAGCCGCGATTTGACGGTGT‑TTGATGCCACCTGT‑CCGCTGGTGACCAAAGTGCATATGGAAGTCGCCCGCGCCAGCCGTCGTGGCGAAGAGTCGATTCTCATCGGCCACGCCGGGCATCCGGAAGTGGAAGGTACGATGGGCCCGAACAGTACCCCGGAAAGGGGAATGTATCTGGTCGAATCGCCGGACGAtgtg > 2:332989/1‑251 (MQ=255) gATCCTGATTTTCTCCGCACACGGTGTTTCTCAGGCGGTACGTAACGAAGCAAAAAGTCGCGATTTGACGGTGT‑TTGATGCCACCTGT‑CCGCTGGTGACCAAAGTGCATATGGAAGTCGACCGCGCCAGTCGCCGTGGCGAAGAATCTATTCTCATCGGTCACGCCGGGCACCCGGAAGTGGAAGGGACAATGGGCCCGTACAGTAACCCGGAAGGGGGAATGTATCTGGTCGCATCGCCGGACGAtgtgg > 2:198411/1‑250 (MQ=255) ccTGATTTTCTCCGCACACGGTGTTTCTCAGGCGGTACGTAACGAAGCAAAAAGCCGCGATTTGACGGTGT‑TTGATGCCACCTGT‑CCGCTGGTGACCAAAGTGCATATGGAAGTCGCCCGCGCCAGCCGTCGTGGCGAAGAGTCGATTCTCATCGGCCACGCCGGGCATCCGGAAGTGGAAGGTACGATGGGCCAGTACAGTAACCCGGAAGGGGGAATGTATCTGGTCGAATCGCCGGACGATGTGTGGa < 1:76728/251‑1 (MQ=255) tGATTTTCTCCGCACACGGTGTTTCTCAGGCGGTACGTAACGAAGCAAAAAGCCGCGATTTGACGGTGT‑TTGATGCCACCTGT‑CCGCTGGTGACCAAAGTGCATATGGAAGTCGCCCGCGCCAGCCGTCGTGGCGAAGAGTCGATTCTCATCGGCCACGCCGGGCATCCGGAAGTGGAAGGTACGATGGGCCAGTACAGTAACCCGGAAGGGGGAATGTATCTGGTCGAATCGCCGGACGATGTGTGGaa > 1:36155/1‑250 (MQ=255) gATTTTCTCCGCACACGGTGTTTCTCAGGCGGTACGTAACGAAGCAAAACGCCGCGATTTGACGGTGT‑TTGATGCCACCTGT‑CCGCTGGTGACCAAAGTGCATATGGAAGTCGCCCGCGCCAGCCGTCGTGGCGAAGAGTCGATTCTCATCGGCCACGCCGGGCATCCGGAAGTGGAAGGTACGATGGGCCAGTACAGTAACCCGGAAGGGGGAATGTATCTGGTCGAATCGCCGGACGATGTGTGGAAAc > 1:134307/1‑251 (MQ=255) ttCTCCGCACACGGTGTTTCTCAGGCGGTACGTAACGAAGCAAAAAGCCGCGATTTGACGGTGT‑TTGATGCCACCTGT‑CCGCTGGTGACCAAAGTGCATATGGAAGTCGCCCGCGCCAGCCGTCGTGGCGAAGAGTCGATTCTCATCGGCCACGCCGGGCATCCGGAAGTGGAAGGTACGATGGGCCAGTACAGTAACCCGGAAGGGGGAATGTATCTGGTCGAATCGCCGGACGATGTGTGGAAACTGa < 1:345866/250‑1 (MQ=255) ttCTCAGCACAAGGTGGTGCTCAGGCGGTACGATACGAGGCAAAAAGCTGCGATTTGACTGTGT‑TGGATGCCACCGAT‑GCGGTGGTGACCAAAGTGCATATGGAAGTCTCCCGCGTCAGCCGTCGGGGCGAAGAGGCGATTCTCATCGGCCACTCCGGGCCTCCGGAAGTGGAAGGTACGATGGGCCAGTACAGTAACCCGGAAGGGGGAATGTATCTGGTGGAATCGCCGGCCGATGTGTGGAAACTGa < 2:312589/250‑1 (MQ=255) ctcctcACACGGTGTTTCTCAGGCGGTACGTAACGAAGCAAAAAGCCGCGATTTGACGGTGT‑TTGATGCCACCTTT‑CCGCTGGTGACCAAAGTGCATATGGAAGTCGCCCGCGCCAGCCGTCGTGGCGAAGAGTCGATTCTCATCGGCCACGCCGGGCATCCGGAAGTGGAAGGTACGCTGGGCAAGTACAGTAACCCGGAAGGGGGACTGGAGCTGGTCGAATCGCCggtcgtagagtggaacctgaatg > 2:314928/1‑230 (MQ=255) ctcCGCACTCGGTGTTTCTCAGGCGGTACGTAACGAAGCAAAAAGCAGCGATTTGACGGTGT‑TTGATGCCACC‑GTGCCGCTGGTGACTAAAGTGCATATGGAAGTCGCCCGCGCCAGCCGTCGTGGCGAAGAGTCGATTCTCATCGGCCACGCCGGGCAGCCGGAAGTGGAAGGTACGATGGGCCAGTACAGTAACCCGGAAGGGGGAATGTATCTGGTAGAATCg < 2:110077/226‑1 (MQ=255) ctcCGCACACGGTGTTTCTCAGGCGGTACGTAACGAAGCAAAAAGCCGCGATTTGACGGTGT‑TTGATGCCACCTGT‑CCGCTGGTGACCAAAGTGCATATGGAAGTCGCCCGCGCCAGCCGTCGTGGCGAAGAGTCGATTCTCATCGGCCACGCCGGGCATCCGGAAGTGGAAGGTACGATGGGCCAGTACAGTAACCCGGAAGGGGGAATGTATCTGGTCGAATCg > 1:110077/1‑226 (MQ=255) cGCACACGGTGTTTCTCAGGCGGTACGTAACGAAGCAAAAAGCCGCGATTTGACGGTGT‑TTGATGCCACCTGT‑CCGCTGGTGACCAAAGTGCATATGGAAGTCGCCCGCGCCAGCCGTCGTGGCGACGAGTCGATTCTCATCGGCCACGCCGGGCATCCGGAAGTGGACGGTACGATGGGCCAGTACAGTAACCCGGAAGGGGGACTGTATCTGGGCGAATCGCCGGACGATGTGTGGAAACTGTCGGTc > 2:80072/1‑250 (MQ=255) cacaCGTTGTTTCTCAGGCGGTACTTAACGAAGCAAAAAGCCGCGATTTGACGGTGT‑TTGATGCCACCTGT‑CCGCTGGTGACCAAAGTGCATATGGAAGTCGCCCGCGCCAGCCGTCGTGGCGAAGAGTCGATTCTCATCGGCCACGCCGGGCATCCGGAAGTGGAAGGTACGATGGGCCAGTACAGTAACCCGGAAGGGGGAATGTATCTGGTCGAATCGCCGGACGATGTGTGGAAACTGACGGTCaaa < 2:85968/251‑1 (MQ=255) tgtTTCTCAGGCGGTACGTAACGAAGCAAAAAACCGCGATTTGACGGAGT‑TTGATGCCACCTGT‑CCGCTGGTGACCAAAGTGCATATGGAAGTCGCCCGCGCCAGCCGTCGTGGCGAAAAGTCGATTCTCATCGGCCACGCCGGGCATCCGGAAGTGGAAGGTACGCTGGGCCAGTACAGTAACCCGGAAGGGGGAATGTATCTGGTCGAATCGCCGGACGATGTGTGGAAACTGACGGTCAAAAACGa > 1:221242/1‑249 (MQ=255) tttCTCAGGCGGTACGTAACGAAGCAAAAAGCCGCGATTTGACGGTGT‑TTGATGCCACCTGT‑CCGCTGGTGACCAAAGTGCATATGGAAGTCGCCCGCGCCAGCCGTCGTGGCGAAGAGTCGATTCTCATCGGCCACGCCGGGCATCCGGAAGTGGAAGGTACGATGGGCCAGTACAGTAACCCGGAAGGGGGAATGTATCTGGTCGAATCGCCGGACGATGTGTGGAAACTGACGGTCAAAAACGAag > 1:237944/1‑249 (MQ=255) tcAGGCGGTACGTAACGAAGCAAAAAGCCGCGATTTGACGGTGT‑TTGATGCCACCTGT‑CCGCTGGTGACCAAAGTGCATATGGAAGTCGCCCGCGCCAGCCGTCGTGGCGAAGAGTCGATTCTCATCGGCCACGCCGGGCATCCGGAAGTGGAAGGTACGATGGGCCAGTACAGTAACCCGGAAGGGGGAATGTATCTGGTCGAATCGCCGGACGATGTGTGGAAACTGACGGTCAAAAACGAAGAGAAGc > 1:110547/1‑251 (MQ=255) gTACGTAACGACGCAAAAAGCCGCGATTTGACGGTGT‑TTGATGCCACCTGT‑CCGCTGGTGACCAAAGTGCATATGGAAGTCGCCCGCGCCACCCGTCGTGGCGAAGAGCCGATTCTCATCGGCCACGCCGGGCATCCGGAAGTGGAGGGTACGAGGGGCCAGTACAGTAACCCGGAAGGGGGAATGTAACTGGTCGAATAGCCGGACGATGTGTGGAATCTGACGGACAACAAAGAAGGGaaacccccctt > 2:32282/1‑242 (MQ=255) aCGTAACGAAGCAAAAAGCCGCGATTTGACGGTGT‑TTGATGCCACCTGT‑CCGCTGGTGACCAAAGTGCATATGGAAGTCGCCCGCGCCAGCCGTCGTGGCGAAGAGTCGATTCTCATCGGCCACGCCGGGCATCCGGAAGTGGAAGGTACGATGGGCCAGTACAGTAACCCAGAAGGGGGAATGTATCTGGTCGAATCGCCGGACGATGTGTGGAAACTGACGGTCAAAAACGAAGAGAAGCTCTCCttt < 1:117016/250‑1 (MQ=255) cgcaaCGAAGCAAAAAGCCGCTAGTTGACGGTTG‑TTGATGCCACCGGT‑CCTCTGGTGACCAAAGTGAATATGGAAGCCGCCCGCGCCAGCCGGCGTGGCGAAGAGTCGATTCTCATCGGCCACGCCGGGCATCCGGAAGTGGAAGGTACGATGGGCCAGTACAGTAACCCGGAAGGGGGAATGTATCTGGTCGAATCGCCGTACGATGTGTGGAAACTGACGGTAAAAAACGAAGAGAATCTCTCCTTTAt < 2:249332/248‑1 (MQ=255) cGTAACGAAGCAAAAAGCCGCGATTTGACGGTGT‑TTGATGCCACCTGT‑CCGCTGGTGACCAAAGTGCATATGGAAGTCGCCCGCGCCAGCCGTCGTGGCGAAGAGTCGATTCTCATCGGCCACGCCGGGCATCCGGAAGTGGAAGGTACGATGGGCCAGTACAGTAACCCGGAAGGGGGAATGTATCTGGTCGAATCGCCGGACGATGTGTGGAAACTGACGGTCAAAAACGAAGAGAAGCTCTCCTTTAt > 1:260422/1‑251 (MQ=255) aaCGAATCAAAAAGCCGCGATTTGACGGTGT‑TTGATGCCACCTGT‑CCGCTGGTGACCAAAGTGCATATTGAAGTCGCCCGCGCCAGCCGTCGTGGCGAAGAGTCGATTCTCATCGGCCACGCCGGGCATCCGGAAGTGGAAGGTACGATGGGCCAGTACAGTAACCCGGAAGGGGGAATGTATCTGGTCGAATCGCCGGACGATGTGTTGAATCTGACGGTCAAAAACGAAGAGAAGCTCTCCTTTATGa < 1:101901/250‑1 (MQ=255) | GTTGGCCAACCCGCGTGGTTTTTGTGCCGGGGTAGACCGCGCTATCAGCATTGTTGAAAACGCGCTGGCCATTTACGGCGCACCGATATATGTCCGTCACGAAGTGGTACATAACCGCTATGTGGTCGATAGCTTGCGTGAGCGTGGGGCTATCTTTATTGAGCAGATTAGCGAAGTACCGGACGGCGCGATCCTGATTTTCTCCGCACACGGTGTTTCTCAGGCGGTACGTAACGAAGCAAAAAGTCGCGATTTGACGGTGT‑TTGATGCCACCTGT‑CCGCTGGTGACCAAAGTGCATATGGAAGTCGCCCGCGCCAGTCGCCGTGGCGAAGAATCTATTCTCATCGGTCACGCCGGGCACCCGGAAGTGGAAGGGACAATGGGCCAGTACAGTAACCCGGAAGGGGGAATGTATCTGGTCGAATCGCCGGACGATGTGTGGAAACTGACGGTCAAAAACGAAGAGAAGCTCTCCTTTATGA > NC_000913/26288‑26769 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |