| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 11,225 | C→T | M44I (ATG→ATA) R132R (CGC→CGT) |
yaaW ← mbiA → |
putative enzyme‑specific chaperone YaaW uncharacterized protein MbiA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 11,225 | 0 | C | T | 80.7% | 51.6 / 9.4 | 31 | M44I (ATG→ATA) R132R (CGC→CGT) | yaaW mbiA | putative enzyme‑specific chaperone YaaW uncharacterized protein MbiA |
| Reads supporting (aligned to +/- strand): ref base C (4/2); new base T (12/13); total (16/15) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.54e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.48e-01 | |||||||||||
CCAGGTATTACGCAGAAATTGTTCCAGTAACTGTTGCTCAATTTCAAACGTAGACATCTCTTTGTCGGCTTTCAGCTTCAATCGCTTTGAAACATCGAGCAAAATGGCCCGATACAATTTACCGTGTCCGCGCAGTTTGTTGGCGATACTATCGCCACCAAAATGCTGTAATTCTCCGGCAATCAGCTGCCAGTTGCGGCGATGTTGCTCGGGATGCCCTTCCATCGATTTAAACAGTTCGTTGCGCATCAGTACGCTGGAGA‑GGCGAGTTTTGCCTTTTTCATTATG‑GGTGAGCAATCGGGCGAAATTTGCCAACTGTTCCTCACTACAATGCTGAAGAAAATCCAGATCTGAATCATTCAGGTAATTAACATTCATTTTTTGTGGCTTCTATATTCTGGCGTTAGTCGTCGCCGATAATTTTCAGCGTGGCCATATCCGATGAGTTCACCGTATGACCCGAAAAGGTGATTTTTGAGACGCAGCG > NC_000913/10979‑11465 | ccAGGTGTTACGCAGAAATTGTTCCAGTAACTGTTGCTCAATCTCAAACGTAGACATCTCTTTGGCGGCTTTCAGCTTCAATCGTTTTGAAACATCGAGCAAAATGGCCCGATACAATTTACCGTGTCCGCGCAGTTTGTTGGCGATACTATCGCCACCAAAATGCTGTAATTCTCCAGCAATCAGCTGCCAGTTGCGGCGATGTTGCTCGGGATGCCCTTCCATCGATTTAAACAGTTCGTTGCGTATc < 1:248831/250‑1 (MQ=255) gTATTACGCAGAAATTGTTCCAGTAACTGTTGCTCAATTTCAAACGTAGACATCTCTTTGTCGGCTTTCAGCTTCAATCGCTTTGAAACATCGAGCAAAATGGCCCGATACAATTTACCGTGTCCGCGCAGTTTGTTGGCGATACTATCGCCACCAAAATGCTGTAATTCTCCGGCAATCAGCTGCCAGTTGCGGCGATGTTGCTCGGGATGCCCTTCCATCGATTTAAACAGTTCGTTGCGCATAAGTAc > 2:75828/1‑251 (MQ=255) gCAGAAATTGTTCCAGTAACTGTTGCTCAATCTCAAACGTAGACATCTCTTTGTCGGCTTTCAGCTTCAATCGTTTTGAAACATCGAGCAAAATGGCCCGATACAATTTACCGTGTCCGCGCAGTTTGTTGGCTATACTATCGCCACCAAAATGCTGTAATTCTTCAGCAATCAGCTGCCAGTTGCGGCGATGGTGCTCGGGATGCCCTTCCATCGATTTAAACAGTTCGTTGCGTATCAGTACGCTGgag < 1:163722/251‑1 (MQ=255) cAGAAATTGTTCCAGTAACTGTTGCTCAATCTCAAACGTAGACATCTCTTTGTCGGCTTTCAGCTTCAATCGGTTTGAAACATCGAGCAAAATGGCCCGATACAATTTACCGTGTCCGCGCAGATTGTTGGCGATACTCTCGCCACCAAAATGCTGTAATTCTCAAGCAATCAGATGACAGATGCGGCGAATCTGCACGGGATGCCCTACCATCGATTTAAACAGTTCGTTGCGTATCAGTAAGCTGgagg > 2:96702/1‑250 (MQ=255) gAAAGTGTTCCACTAACTGTTGCTCAATCTCAAACGTAGACATCTCTTTGTCGGCTTTCAGCTTCAATCGTTTTGAAACATCGAGCAAAATGGCCCGATACAAGTTCCCGTGTCCGCGCAGTTTGTTGGCGATACTTTCGCCACCAAAATGCTGTAAGTCTCCAGCAATCATCTGCCAGTTGCGGCGTTGTTGCTCGGGATGCCCTTCCATCGATTTAAACATTTCGTTGCGTATCAGTTCGCTGGAGA‑gg < 2:73749/251‑1 (MQ=255) aaTTGTTCCAGTAACTGTTGCTCAATCTCAAACGTAGACATCTCTTTGTCGGCTTTCAGCTTCAATCGGTTTGAAACATCGAGCAAAATGGCCCGATACAATTTACCGTGTCCGCGCAGTTTGTTGGCGATACTATCGCCACCAAAATGCTGTAATTCTCCAGCAATCAGCTGCCAGTTGCGGCGATGTTGCTCGGGATGCCCTTCCATCGATTTAAACAGTTCGTTGCGTATCAGTACGCTGGAGA‑GGCg < 1:359698/251‑1 (MQ=255) aTTGTTCCAGTAACTGTTGCTCAATCTCAAACGTAGACATCTCTTTGTCGGCTTTCAGCTTCAATCGTTTTGAAACATCGAGCAAAATGGCCCGATACAATTTACCGTGTCCGCGCAGTTTGTTGGCGATACTATCGCCACCAAAATGCTGTAATTCTCCAGCAATCAGCTGCCAGTTGCGGCGATGTTGCTCGGGATGCCCTTCCATCGATTTAAACAGTTCGTTGCGTATCAGTACGCTGGAGA‑GGCg > 1:26147/1‑250 (MQ=255) tGTTCCAGTAACTGTTGCTCACTTTCAAAAGTAGACATCTCTTTGTCGGCTTTCAACTTCAATCGCTTTGAAACATCGAGCAACATGGCCCGATAAAATTTACCGTGTCCGCGCAGTTTGTTGGCGATACTATCGACACCAAAATGCTGTAATTCTCCGGCAATCATCTGCCAGTTGCGGCGATGTTGCTAGGGATGCCCTTCCATCGATTTAAACAGTTCGTTGCGCATCCGTACGATGGAGC‑GGCGAgg > 2:44055/1‑250 (MQ=255) gTTCCAGTAACTGTTGCTCAATCTCAAACGTAGACATCTCTTTGGCGGCTTTCAGCTTCAATCGTTTTGAAACATCGAGCAAAATGGCCCGATACAATTTACCGTGTCCGCGCAGTTTGTTGGCGATACTATCGCCACCAAAATGCTGTAATTCTCCAGCAATCAGCTGCCAGTTGCGGCGATGTTGCTCGGGATGCCCTTCCATCGATTTAAACAGTTCGTTGCGTATCAGTACGCTGGAGA‑GGCTAGtt < 1:254103/251‑1 (MQ=255) tAACTGTTGCTCAATTTCAAACGTAGACATCTCTTTGTCGGCTTTCAGCTTCAATCGCTTTGAAACATCGAGCAAAATGGCCCGCTACAATTTACCGTGTCCGCGCAGTTTGTTGGCGCTACTATCGCCACCAAAATGCTGTACTTCTCCGGCAATCAGCTGCCAGTTGCGGCGATGTTGCTCGGGAGGCCCTTCCATCGATTTAAACAGTTCGTTGTGCATCATTACGCTGGAGA‑GGCGAGTTTTACCtt > 2:110411/1‑251 (MQ=255) tAACTGTTGCTCAATCTCAAACGTAGACATCTCTTTGTCGGCTTTCAGCTTCAATCGTTTTGAAACATCGAGCAAAATGGCCCGATACAATTTACCGTGTCCGCGCAGTTTGTTGGCGATACTATCGCCACCAAAATGCTGTAATTCTCCAGCAATCAGCTGCCAGTTGCGGCGATGTTGCTCGGGATGCCCTTCCATCGATTTAAACAGTTCGTTGCGTATCAGTACGCt > 1:107447/1‑231 (MQ=255) aaaCGTAGACATCTCTTTGTCGGCTTTCAGCTTCAATCGTTTTGAAACATCGAGCAAAATGGCCCGATACAATTTACCGTGTCCGCGCAGTTTGTTGGCGATACTATCGCCACCAAAATGCTGTAATTCTCCAGCAATCAGCTGCCAGTTGCGGCGATGTTGCTCGGGATGCCCTTCCATCGATTTAACCAGTTCGTTGCGTATCAGTACGCTGG‑GACGGCGAGTTTTGCCTTTTTCATTTTG‑GGGGAGc > 2:270080/1‑250 (MQ=255) aCGTAGACATCTCTTTGTCGGCTTTCAGCTTCAATCGTTTTGAAACATCGAGCAAAATGGCCCGATACAATTTACCGTGTCCGCGCAGTTTGTTGGCGATACTATCGCCACCAAAATGCTGTAATTCTCCAGCAATCAGCTGCCAGTTGCGGCGATGTTGCTCGGGATGCCCTTCCATCGATTTAAACAGTTCGTTGCGTATCAGTACGCTGGAGA‑GGCGAGTTTTGCCTTTTTCATTATG‑GGTGAGCAAt < 1:270080/251‑1 (MQ=255) ctctTTGTCGGCTTTCAGCCTCAATCGCTTTGAAACATCGAGCAAAATGGCCCGATACAATTTACCGTGTCCGCGCAGTTTGTTGGCGATACTATCGCCACCAAAATGCTGTAATTCTCCGGCAATCAGCTGCCAGTTGCGGCGATGTTGCTCGGGATGCCCTTCCATCGATTTAAACCGTTCGTTGCGCATCAGTACGCTGGAGA‑GGCGAGTTTTGCCTTTTTCATTATG‑GGTTAGCAATCggggggaa > 2:181540/1‑245 (MQ=255) cGGCTTTCAGCTTCAAGCGGTTTGAAACATCGAGCAGAATGGCCCGATACAAGTTACCGTGTCCGCGCAGTTTGTTGGCGATACTATCGCCACCAAAATGCTGTAATTCTCCAGCAATCAGCTGCCAGTTGCGGCGATGTTGCTCGGGATGCCCTTCCATCGATTTAAACAGTTCGTTGCGTATCAGTACGCTGGAGA‑GGCGAGTTTTGCCTTTTTCATTATG‑GGTGAGCAATCGGGCGAAATTTGCCaa < 1:184675/250‑1 (MQ=255) aaTCGTTTTGAAACATCGAGCAAAATGGCCCGATACAATTTACCGTGTCCGCGCAGTTTGTTGGCGATACTATCGCCACCAAAATGCTGTAATTCTCCAGCAATCAGCTGCCAGTTGCGGCGATGTTGCTCGGGATGCCCTTCCATCGATTTAAACAGTTCGTTGCGTATCAGTACGCTGGAGA‑GGCGAGTTTTGCCTTTTTCATTATG‑GGTGAGCAATCGGGCGAAATTTGCCAACTGTTCCTCACTACa < 1:64789/251‑1 (MQ=255) tcgttttGAAACATCGAGCAAAATGGCCCGATACAATTTACCGTGTCCGCGCAGATTGTTGGCGATAATATCGCCACCAAAATGCTGTAATTCTCCAGCAATCAGCTGCCAGTTGCGGCGATGTTGCTCGGGATGCCCTTCCATCGATTTAAACAGTTCGTTGCGTATCAGTACGCTGGAGA‑GGCGAGTTTTGCCTTTTTCATTATG‑GGAGAGCAATCGGGCGAAATTTGCCAACTGTGCCTCataacaa > 2:99405/5‑244 (MQ=255) ccGCTTTGAAACATCGAGCAAAATGGCCCGATACAATTTACCGTGTCCGCGCAGTTTGTTGGCGATACTATCGCCACCAAAATGCTGTAATTCTCCGGCAATCAGCTGCCAGTTGCGGCGATGTTGCTCGGGATGCCCTTCCATCGATTTAAACAGTTCGTTGCGCATCAGTACGCTGGAGA‑GGCGAGTTTTGCCTTTTTCATTATG‑GGTGAGCAATCGGGCGAAATTTGCCAACTGTTCCTCACTACAAt < 1:181540/250‑1 (MQ=255) cgttttGAAACATCGAGCAAAATGGCCCGATACAATTTACCGTGTCCGCGCAGTTTGTTGGCGATACTATCGCCACCAAAATGCTGTAATTCTCCAGCAATCAGCTGCCAGTTGCGGCGATGTTGCTCGGGATGCCCTTCCATCGATTTAAACAGTTCGTTGCGTATCAGTACGCTGGAGA‑GGCGAGTTTTGCCTTTTTCATTATG‑GGTGAGCAATCGGGCGAAATTTGCCAACTGTTCCTCACTACAATg > 1:96716/4‑251 (MQ=255) aTCGAGCAAAATGGCCCGATACAATTTACCGTGTCCGCGCAGTTTGTTGGCGATACTATCGCCACCAAAATGCTGTAATTCTCCAGCAATCAGCTGCCAGTTGCGGCGATGTTGCTCGGGATGCCCTTCCATCGATTTAAACAGTTCGTTGCGTATCAGTACGCTGGAGA‑GGCGAGTTTTGCCTTTTTCATTATG‑GGTGAGCAATCGGGCGAAATTTGCCAACTGTTCCTCACTACAATGCTGAAGAAAAt > 1:63835/1‑251 (MQ=255) aaTGGCCCGATACAATTTACCGTGTCCGCGCAGTTTGTTGGCGATACTATCGCCACCAAAATGCTGTAATTCTCCAGCAATCAGCTGCCAGTTGCGGCGATGTTGCTCGGGATGCCCTTCCATCGATTTAAACAGTTCGTTGCGTATCAGTACGCTGGAGA‑GGCGAGTTTTGCCTTTTTCATTATG‑GGTGAGCAATCGGGCGAAATTTGCCAACTGTTCCTCACTACAATGCTGAAGAAAATCCAGATCTg < 1:270683/251‑1 (MQ=255) ggCCCGATACAATTTACCGTGTCCGCGCAGTTTGTTGGCGATACTATCGCCACCAAAATGCTGTAATTCTCCAGCAATCAGCTGCCAGTTGCGGCGATGTTGCTCGGGATGCCCTTCCATCGATTTAAACAGTTCGTTGCGTATCAGTACGCTGGAGA‑GGCGAGTTTTGCCTTTTTCATTATG‑GGTGAGCAATCGGGCGAAATTTGCCAACTGTTCCTCACTACAATGCTGAAGAAAATCCAGATCTGaa < 1:316429/250‑1 (MQ=255) gaCCGTGTTCGCGCAGTATGTTGTCGATACTATCGCTACCAAAATGCTGTAATGCTCCAGCAATCAGCTGCCAGTTGCGGCGATGTTGCTCGGGATGCCCTTCCATCGATTTAAACAGTTCGTTGCGTATCAGTACGCTGGAGA‑GGCGAGTTTTGACTTATGCATTATG‑GGGGAGCAATCGGGCGAAATTTGACAACTGGTCCTCACTACAATGCTGAAGAAAATCCAGATCTGAATCATTCATGTAAtt < 2:70130/249‑1 (MQ=255) aCCGTGTCCGCGCAGTTTGTTGGCGATACTATCGCCACCAAAATGCTGTAATTCTCCGGCAATCAGCTGCCAGTTGCGGCGATGTTGCTCGGGATGCCCTTCCATCGATTTAAACAGTTCGTTGCGCATCAGTACGCTGGAGA‑GGCGAGTTTTGCCTTTTTCATTATG‑GGTGAGCAATCGGGCGAAATTTGCCAACTGTTCCTCACTACAATGCTGAAGAAAATCCAGATCTGAATCATTCAGGTAATTa < 1:44055/250‑1 (MQ=255) cGTGTCCGCGCAGTTTGTTGGCGATACTATCGCCACCAAAATGCTGTAATTCTCCAGCAATCAGCTGCCAGTTGCGGCGATGTTGCTCGGGATGCCCTTCCATCGATTTAAACAGTTCGTTGCGTATCAGTACGCTGGAGA‑GGCGAGTTTTGCCTTTTTCATTATG‑GGTGAGCAATCGGGCGAAATTTGCCAACTGTTCCTCACTACAATGCTGAAGAAAATCCAGATCTGAATCATTCAGGTAATTAAc > 1:203656/1‑250 (MQ=255) tgttgGCGATACTATCGCCACGAACATGCTGTAATTCGCAAGCAATCAGCTGCCAGATGCGGCGATGATGCTCGGAATGCCCTTCCATCGATTTAAACAGTTCGTTGCGTATCACTACGCTGGAGA‑GGCGAGTTTTGCCTTTTTCATTATGATGTG‑GCAATCGGGCGAAGATTGCAACCTGTTCCTCACTACAATGCTGAAGCAATGACAGCTCTGAATCTTTCAGGAAATTAACATTAATTTTTTTTggt > 2:64219/1‑250 (MQ=255) gCCACCAAAATGCTGTAATTCTCCAGCAATCAGCTGCCAGTTGCGGCGATGTTGCTCGGGATGCCCTTCCATCGATTTAAACAGTTCGTTGCGTATCAGTACGCTGGAGA‑GGCGAGTTTTGCCTTTTTCATTATG‑GGTGAGCACTCGGGCGAAATTTGCCAACTGTTCCTCACTACAATGCTGACGAAAATCCAGATCTGAATCATTCAGGACATTAACATTACTTTTTTGGGGTTTCTATCTTCTGGCGt > 1:236353/1‑251 (MQ=255) tGCCAGTTGCGGCGATGTTGCTCGGGATGCCCTTCCATCGATTTAAACAGTTCGTTGCGTATCAGTACGCTGGAGA‑GGCGAGTTTTGCCTTTTTCATTATG‑GGTGAGCAATCGGGCGAAATTTGCCAACTGTTCCTCACTACAATGCTGAAGAAAATCCAGATCTGAATCATTCAGGAAATTAACATTCATTTTTTGTGGTTTCTATATTCTGGCGTTAGTCGTCGCCGATAATTTTCAGCGTGGCCatat > 1:280281/1‑251 (MQ=255) gTTCGTTGCGTATCAGTACGCTGGAGA‑GGCGAGTTTTGCCTTTTTCATTATG‑GGTGAGCAATCGGGCTAAATTTGCCAACTGTTCCTCACTACAATGCTGAAGAAAATCCAGATCTGAATCATTCAGGTAATTAACATTCATTTTTTGTGGTTTCTATATTCTGGCGTTAGTCGTCGCCGATAATTTTCAGCGTGGCCATATCCGATGAGTTCACCGTATGACCGGAAAAGGTGATTTTTGAGACGCAGCg < 1:100202/251‑1 (MQ=255) ttGCGTATCAGTACGCTGGAGA‑GGCGAGTTTTGCCTTTTTCATTATG‑GGTGAGCAATCGGGCGAAATTTGCCAACTGTTCCTCACTACAATGCTGAAGAAAATCCAGATCTGAATCATTCAGGTAATTAAc < 2:133374/131‑1 (MQ=255) ttGCGTATCAGTACGCTGGAGA‑GGCGAGTTTTGCCTTTTTCATTATG‑GGTGAGCAATCGGGCGAAATTTGCCAACTGTTCCTCACTACAATGCTGAAGAAAATCCAGATCTGAATCATTCAGGTAATTAAc > 1:133374/1‑131 (MQ=255) | CCAGGTATTACGCAGAAATTGTTCCAGTAACTGTTGCTCAATTTCAAACGTAGACATCTCTTTGTCGGCTTTCAGCTTCAATCGCTTTGAAACATCGAGCAAAATGGCCCGATACAATTTACCGTGTCCGCGCAGTTTGTTGGCGATACTATCGCCACCAAAATGCTGTAATTCTCCGGCAATCAGCTGCCAGTTGCGGCGATGTTGCTCGGGATGCCCTTCCATCGATTTAAACAGTTCGTTGCGCATCAGTACGCTGGAGA‑GGCGAGTTTTGCCTTTTTCATTATG‑GGTGAGCAATCGGGCGAAATTTGCCAACTGTTCCTCACTACAATGCTGAAGAAAATCCAGATCTGAATCATTCAGGTAATTAACATTCATTTTTTGTGGCTTCTATATTCTGGCGTTAGTCGTCGCCGATAATTTTCAGCGTGGCCATATCCGATGAGTTCACCGTATGACCCGAAAAGGTGATTTTTGAGACGCAGCG > NC_000913/10979‑11465 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |