| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 10,973 | T→A | K128N (AAA→AAT) I48I (ATT→ATA) |
yaaW ← mbiA → |
putative enzyme‑specific chaperone YaaW uncharacterized protein MbiA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 10,973 | 0 | T | A | 97.1% | 89.0 / NA | 34 | K128N (AAA→AAT) I48I (ATT→ATA) | yaaW mbiA | putative enzyme‑specific chaperone YaaW uncharacterized protein MbiA |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (14/19); minor base C (1/0); total (15/19) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.41e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.38e-01 | |||||||||||
TGACCGCTTTAACCCCATTTAGTGCCGCACCTACAGGGCCTCCCAGCCCCGCGCCGCGCAGCAAACCATGCCCAAGTACGCTCATTGCTGCGTGGGTGCGTAAAATGCGGGTCAGTTGGCTGGAAAGCAAATGCGACACACCTTTTGCCAATAATTTGTCTTTCATCAGCAGCGGCAGCAGCTCTTCCAGCTCATTCACCCTGGCATCGACCGCGTGCAGAAACTCCTGCTTATGTTCCTCGTCCATTTTCTTCCAGGTATTACGCAGAAATTGTTCCAGTAACTGTTGCTCAATTTCAAACGTAGACATCTCTTTGTCGGCTTTCAGCTTCAATCGCTTTGAAACAT‑CGAGCAAAATGGCCCGATACAATTTACCGTGTCCGCGCAGTTTGTTGGCGATACTATCGCCACCAAAATGCTGTAATTCTCCGGCAATCAGCTGCCAGTTGCGGCGATGTTGCTCGGGATGCCCTTCCATCGATTTAAACAGTTC > NC_000913/10726‑11218 | tGACCGCTTTAACCCCATTTAATGCTGCGCCCACAGGGCCTCCCAGACCCGCGCCGCGCAGCAAACCATGCCCAAGCACGCTCATTGCTGCGTGGGTGCGTAAAATGCGGGTCAATTGGCTGGAAAGCAAATGCGACACGCCTTTTGCCAATAATTTGTCTTTCATCAGCAGCGGCAGCAGCTCTTCCAGCTCATTCACCCTGGCATCGACCGCGTGCAGAAACTCCTGCTTATGTTCCTCGTCCATAttc > 1:271220/1‑251 (MQ=255) tttAACCCCATTTAATGCTGCGCCCACAGGGCCTCCCAGACCCGCGCCGCGCAGCAAACCATGCCCAAGCACGCTCATTGCTGCGTGGGTGCGTAAAATGCGGGTCAATTGGCTGGAAAGCAAATGCGACACGCCTTTTGCCAATAATTTGTCTTTCATCAGCAGCGGCAGCAGCTCTTCCAGCTCATTCACCCTGGCATCGACCGCGTGCAGAAACTCCTGCTTAAGTTCCTCGTCCATATTCTTCCAgg > 2:337061/1‑251 (MQ=255) ggccaaaggggcaccctggcccGCGGCGCGTAGTAAATCATGCCCAAGCACGCTCATGGCTGAGGGGGTGCGTAAAATGCTGGTAAATTGGCGTGAAAGCAAATGCGACACGTCTTTTGCCAATAATGTGTCTTTCATCAGCAGCGGCATCAGCTCTTCCAGCTCATTCACCCTGGCATCGACCGCGTGCAGAAACGCCTGCTGATGTTCCTCGTCCATATTCTTCCAGGTGTTACGCAGAAATTGTTcc < 2:360044/231‑1 (MQ=255) cccaCAGGGCCTCCCAGACCCGCGCCGCGCAGCAAACCATGCCCAAGCACGCTCATTGCTGCGTGGGTGCGTAAAATGCGGGTCAATTGGCTGGAAAGCAAATGCGACACGCCTTTTGCCAATAATTTGTCTTTCATCAGCAGCGGCAGCAGCTCTTCCAGCTCATTCACCCTGGCATCGACCGCGTGCAGAAACTCCTGCTTATGTTCCTCGTCCATATTCTTCCAGGTGTTACGCAGAAATTGTTCCAg < 1:37449/248‑1 (MQ=255) ccaaCAGGGCCTCCCAGACCCGCGCCGCACAGCAAACCATGCCCAAGCACGCTCATTGCTGCGTGGGTGCGTACAATGCGGGTCAATTGGCTGGAAAGCAAATGCGACACGCCTTTTGCCAATAATTTGTCTTTCATCAGCAGCGGCAGCAGCTATTACAGCTCATTCACCCTGGCATCGACCGCGTGCAGAAACTCCTGCTTATGTTCATCGTCCATATTCTTCAAGGTGTTACGCAGAAATTGTTcc > 2:316429/4‑249 (MQ=255) ggCCTCCCAGACCCGCGCCGCGCAGCAAACCATGCCCAAGCACGCTCATTGCTGCGTGGGTGCGTAAAATGCGGGTCAATTGGCTGGAAAGCAAATGCGACACGCCTTTTGCCAATAATTTGTCTTTCATCAGCAGCGGCAGCAGCTCTTCCAGCTCATTCACCCTGGCATCGACCGCGTGCAGAAACTCCTGCTTATGTTCCTCGTCCATATTCTTCCAGGTGTTACGCAGAAATTGTTCCAGTAACTGt > 1:73749/1‑251 (MQ=255) ccccAGACCCGCGCCGCGCAGCAAACCATGCCCAAGCACGCTCATTGCTGCGTGGGTGCGTAAAATGCGGGTCAATTGGCTGGAAAGCAAATGCGACACGCCTTTTGCCAATAATTTGTCTTTCATCAGCAGCGGCAGCAGCTCTTCCAGCTCATTCACCCTGGCATCGACCGCGTGCAGAAACTCCTGCTTATGTTCCTCGTCCATATTCTTCCAGGTGTTACGCAGAAATTGTTCCAGTAACTGTTGCt < 1:63033/250‑1 (MQ=255) ccAAGCACGCTCATTGATGCGAGGGTGCGTAAAATGCGGGTCAATTGGCTGGAAAGCAAATGCGACACGCCTTTTGCAAATAATTTGTCTTTCATCCGCAGCGGCAGCAGCTCTTCCAGCTCATTCACCCTGGCATCGAACGCTGGCAGAAACTCCTGCTTATGTTCCTCGTCCATATTCTTCCAGGTGTTACGCAGAAATTGTTCCAGTAACTGTTGCTCAATCTAAAACGTAGACATCTCTTTGTCggt > 2:213282/1‑250 (MQ=255) cAAGCACGCTCATTGCTGCGTGGGTGCGTAAAATGCGGGTCAATTGGCTGGAAAGCAAATGCGACACGCCTTTTGCCAATAATTTGTCTTTCATCAGCAGCGGCAGCAGCTCTTCCAGCTCATTCACCCTGGCATCGACCGCGTGCAGAAACTCCTGCTTATGTTCCTCGTCCATATTCTTCCAGGTGTTACGCAGAAATTGTTCCAGTAACTGTTGCTCAATCTCAAACGTAGACATCTCTTTGTCGGCt < 1:38405/251‑1 (MQ=255) ccatggctgcGTGGGTGCGTAAAATGCGGGTCAATTTGCGGGAAAGCAAATGCGACACGACTTTTGCCAATAATTTGTCTTTGAGCAGCAGCGGCAGCAGGTCTGCCAGCTCAGGCGCCCGGGCATGGACCGCGTGCAGAAACGCCTGCTGATGTTCCGCGATCATATGCGTCCAGGTGTTACGCAGAAATTGTTCGAGCAACTGTTGCACAAGCTCAAACGTAGACATCTCTTTGTCGGCTTTCAGCtgc < 1:358813/246‑3 (MQ=255) cATTGCTGCGTGGGTGCGTAAAATGCGGGTCAATTGGCTGGAAAGCAAATGCGACACGCCTTTTGCCAATAATGTGTCTTTCATCAGCAGCGGCAGCAGCTCTTCCAGCTCATTCACCCTGGCATCGACCGCGTGCAGAAACTCCTGCTTATGTTCCTCGTCCATATTCTTCCAGGTGTTACGCAGAAATTGTTCCAGTAACTGTTGCTCAATCTCAAACGTAGACATCTCTTTGTCGGCTTTCAGCtt < 2:195030/249‑1 (MQ=255) tGGCTGGAAAGCAAATGCGACACGCCTTTTGCCAATCATTTGTCTTTCATCAGCAGCGGCAGCAGCTCTTCCAGCTCATTCACCCTGGCATCGACCGCGTGCAGAAACTCCTGCTTATGTTCCTCGTCCATATTCTTCCAGGTGTTACGCAGAAATTGTTCCAGTAACTGTTGCTCAATCTCAAACGTAGCCATCTCTTTGTCGGCTTTCAGCTTCAATCGTTTTGAAACCT‑CACACAAAATGACCCGAt > 2:64789/1‑250 (MQ=255) acgccatttGCCAATAATTTGTCTTTCATCAGCAGCGGAAGCAGCTCTTCCAGCTCAATCACACTGGCATAGACCGCGTGCAGAAACTCCTGCTTAGGTTCCTCCTCCATATTCTTCCAGGGGTTACGCAGAAATTGTTCAAGAAACTGTTGCTCAATCTCAAACGTATACATCTCTTTGTCGGCTTTCAGCTTAAATCGGTTT‑ACACATTCGAGCAAATTGGCCAGATAAAATTTAcaggatcatcgc > 2:100202/7‑238 (MQ=255) tGCCAATAATTTGTCTTTCATCAGAAGCGGCAGCAGCTCTTCCAGCCAATTCACCCTGGCATCGACCGCTGGCAGAAACTCCTGCTTATGTTCCTCGTCCATATTCTTCCAGGAGTTACGCAGAAATTGTTCCAGTAACTGTTGCTCAATCTCAAACGTCGACATCTCTTTGTAGGCTTTCAGCTTCAATCGTTTTGAAACAT‑AGAGCAACATAGCCCGCTACAATTTTCCGTGTCCGCGCAGATTGTTgg > 2:282430/1‑251 (MQ=255) gCCAATAATTTGTCTTTCATCAGCAGCGGCAGCAGCTCTTCCAGCTCATTCACCCTGGCATCGACCGCGTGCAGAAACTCCTGCTTATGTTCCTCGTCCATATTCTTCCAGGTGTTACGCAGAAATTGTTCCAGTAACTGTTGCTCAATCTCAAACGTAGACATCTCTTTGTCGGCTTTCAGCTTCAATCGTTTTGAAACAT‑CGAGCAAAATGGCCCGATACAATTTACCGTGTCCGCGCAGTTTGTTgg < 1:169739/250‑1 (MQ=255) atTTGTCTTTCATCAGCAGCGGCAGCAGCTCTTCCAGCTCATTCACCCTGGCATCGACCGCGTGCAGAAACTCCTGCTTATGTTCCTCGTCCATATTCTTCCAGGTGTTACGCAGAAATTGTTCCAGTAACTGTTGCTCAATCTCAAACGTAGACATCTCTTTGTCGGCTTTCAGCTTCAATCGTTTTGAAACAT‑CGAGCAAAATGGCCCGATACAATTTACCGTGTCCGCGCAGTTTGTTGGCGATACt > 1:240287/1‑250 (MQ=255) atcaGCAGCGGCAACAGGTCTTCCAGCTCATTCACCCTGGCCTCGACCGCGTGCAGAAACTCATGCTTATGTTCCTCGTCCCTCTTCTTCCAGGTGTTACGCAGACATTGTTCCAGTAACTGTTGCTCAATCTCAAACGTAGACATCTCTTTGTCGGCTTTCAGCTTCAATCGTTTTGAAACAT‑CGAGCAAAATGGCCCGATACAATTTACAGTGTCAGCGCAGTTTGTTGGCGATACTATCGCCACCaa > 2:50711/1‑250 (MQ=255) cagcagCGGCAGCAGCTCTTCCAGCTCATTCACCCTGGCATCGACCGCGTGCAGAAACTCCTGCTTATGTTCCTCGTCCATATTCTTCCAGGTGTTACGCAGAAATTGTTCCAGTAACTGTTGCTCAATCTCAAACGTAGACATCTCTTTGTCGGCTTTCAGCTTCAATCGTTTTGAAACAT‑CGAGCAAAATGGCCCGATACAATTTACCGTGTCCGCGCAGTTTGTTGGCGATACTATCGCCACCAAAAt > 1:75118/1‑251 (MQ=255) ctTCCAGCTCATTCACCCTGGCATCGACCGCGTGCAGAAACTCCTGCTTATGTTCCTCGTCCATATTCTTCCAGGTGTTACGCAGAAATTGTTCCAGTAACTGTTGCTCAATCTCAAACGTAGACATCTCTTTGTCGGCTTTCAGCTTCAATCGTTTTGAAACAT‑CGAGCAAAATGGCCCGATACAATTTACCGTGTCCGCGCAGTTTGTTGGCGATACTATCGCCACCAAAATGCTGTAATTCTccagc > 2:275591/1‑247 (MQ=255) tCATTCACCCTGGCATCGACCGCGTGCAGAAACTCCTGCTTATGTTCCTCGTCCATATTCTTCCAGGTGTTACGCAGAAATTGTTCCAGTAACTGTTGCTCAATCTCAAACGTAGACATCTCTTTGTCGGCTTTCAGCTTCAATCGTTTTGAAACAT‑CGAGCAAAATGGCCCGATACAATTTACCGTGTCCGCGCAGTTTGTTGGCGATACTATCGCCACCAAAATGCTGTAATTCTCCAGCAATCAGCTg > 1:163471/1‑251 (MQ=255) cATTCACCCTGGCATCGACCGCGGGCAGAAACTCCTGCTTATGTTCCTCGTCCATATTCTTCCAGGTGTTACGCAGAAATTGTTCCAGTAACTGTTGCTCAATCTCAAACGTAGACATCTCTTTGTCGGCTTTCAGCTTCAATCGTTTTGAAACAT‑CGAGCAAAATGGCCCGATACAATTTACCGTGTCCGCGCAGTTTGTTGGCGATACTATCGCCACCAAAATGCTGTAATTCTCCAGCAATCAGCTg < 1:286077/250‑1 (MQ=255) aCCCTGGCATCGACCGCGTGCAGAAACTCCTGCTTATGTTCCTCGTCCATATTCTTCCAGGTGTTACGCAGAAATTGTTCCAGTAACTGTTGCTCAATCTCAAACGTAGACATCTCTTTGTCGGCTTTCAGCTTCAATCGTTTTGAAACAT‑CGAGCAAAATGGCCCGATACAATTTACCGTGTCCGCGCAGTTTGTTGGCGATACTATCGCCACCAAAATGCTGTAATTCTCCAGCAATCAGCTGCCAGtt > 1:256519/1‑251 (MQ=255) ccTGGCATCGACCGCGTGCAGAAACTCCTGCTTATGTTCCTCGTCCATATTCTTCCAGGTGTTACGCAGAAATTGTTCCAGTAACTGTTGCTCAATCTCAAACGTAGACATCTCTTTGTCGGCTTTCAGCTTCAATCGTTTTGAAACAT‑CGAGCAAAATGGCCCGATACAATTTACCGTGTCCGCGCAGTTTGTTGGCGATACTATCGCCACCAAAATGCTGTAATTCTCCAGCAATCAGCTGCCAGTTgc < 1:265133/251‑1 (MQ=255) tGGCATCGACCGCGTGCAGAAACTCCTGCTTATGTTCCTCGTCCATATTCTTCCAGGTGTTACGCAGAAATTGTTCCAGTAACTGTTGCTCAATCTCAAACGTAGACATCTCTTTGTCGGCTTTCAGCTTCAATCGTTTTGAAACAT‑CGAGCAAAATGGCCCGATACAATTTACCGTGTCCGCGCAGTTTGTTGGCGATACTATCGCCACCAAAATGCTGTAATTCTCCAGCAATCAGCTGCCAGTTgcgg > 1:291824/1‑251 (MQ=255) ggCATCGACCGCGTGCAGAAACTCCTGCTTATGTTCCTCGTCCATATTCTTCCAGGTGTTACGCAGAAATTGTTCCAGTAACTGTTGCTCAATCTCAAACGTAGACATCTCTTTGTCGGCTTTCAGCTTCAATCGTTTTGAAACAT‑CGAGCAAAATGGCCCGATACAATTTACCGTGTCCGCGCAGTTTGTTGGCGATACTATCGCCACCAAAATGCTGTAATTCTCCAGCAATCAGCTGCCAGTTgcggc < 1:323050/251‑1 (MQ=255) gCATCGACCGCGTGCAGAAACTCCTGCTTATGTTCCTCGTCCATATTCTTCCAGGTGTTACGCAGAAATTGTTCCAGTAACTGTTGCTCAATCTCAAACGTAGACATCTCTTTGTCGGCTTTCAGCTTCAATCGTTTTGAAACAT‑CGAGCAAAATGGCCCGATACAATTTACCGTGTCCGCGCAGTTTGTTGGCGATACTATCGCCACCAAAATGCTGTAATTCTCCAGCAATCAGCTGCCAGTTgcggcg < 1:321619/251‑1 (MQ=255) cgtcttctgattcTCGTCCATACTCTTCCATGTGTTTAGCATAAATGGTTCCAGTACCTGTTTATTAATCTCAAACTTAGACAGCTCTTTGTCGTCGTTTAGCGTCAATCGTTTAGAAACAT‑CGAGCAAAATTGCCCGATACAATTTACCGTGTCCGCGCAGTTTGTTGGCGATACTATCGTCACCAAAATGCTGTAATGCTCCAGCAATCAGCTGCCAGTTGCGGCGATGTTGCTCGGGATGCCCTGCCa < 2:202864/239‑1 (MQ=255) gCTTATGTTCCTCGTCCATATTCTTCCAGGTGTTACGCAGAAATTGTTCCAGTAACTGTTGCTCAATCTCAAACGTAGACATCTCTTTGTCGGCTTTCAGCTTCAATCGTTTTGAAACAT‑CGAGCAAAATGGCCCGATACAATTTACCGTGTCCGCGCAGTTTGTTGGCGATACTATCGCCACCAAAATGCTGTAATTCTCCAGCAATCAGCTGCCAGTTTCGGCGATGTTGCTCGGGATGCCCTTCCAt < 1:122317/250‑1 (MQ=255) gCTTATGTTCCTCGTCCATATTCTTCCAGGGGTTACTCAGAAATTGTTCCAGTAACTGTTGCTCAATCTCAAACGTAGACATCTCTTTGTCGGCTTTCAGCTTCAATCGTTTTGAAACAT‑CGAGCAAAATGGCCCGATACAATTTACCGTGTCCGCGCAGTTTGTTGGCTATACTATCGCCACCAAAATGCTGTAATTCTCCAGCAATCAGCTGCCAGTTGCGGCGATGTTGCTCGGGATGCCCTTCCAt < 1:213282/250‑1 (MQ=255) tttGTTCCTCGTCCCTATTCTTCCAGGTGTTACGCAGAAATTGTTCCAGTAACTGTTGCTTAATCTCAAACGTAGACATCTCTTTGTCGGCTTTCATCTTCAATCGTTTTGAAACAT‑CGAGCAAAATGGCCCGATACAATTTACCGTGTCCGCGCAGTTTGTTGGCGATACTATCGCCACCAAAATTCTGTAATTCTCCAGCAATCAGCTGCCAGTTGCGGCGATGTTGCTCGGGATGCCCTTCCATCGa < 1:149992/248‑1 (MQ=255) ccTCGTCCATATTCTTCCAGGTGTTACGCAGAAATTGTTCCAGTAACTGTTGCTCAATCTCAAACGTAGACATCTCTTTGTCGGCTTTCAGCTTCAATCGTTTTGAAACAT‑CGAGCAAAATGGCCCGATACAATTTACCGTGTCCGCGCAGTTTGTTGGCGATACTATCGCCACCAAAATGCTGTAATTCTCCAGCAATCAGCTGCCAGTTGCGGCGATGTTGCTCGGGATGCCCTTCCATCGATTTAAAc < 1:378606/251‑1 (MQ=255) cGTCCATATTCTTCCAGGTGTTACGCAGAAATTGTTCCAGTAACTGTTGCTCAATCTCAAACGTAGACATCTCTTTGTCGGCTTTCAGCTTCAATCGTTTTGAAACAT‑CGAGCAAAATGGCCCGATACAATTTACCGTGTCCGCGCAGTTTGTTGGCGATACTATCGCCACCAAAATGCTGTAATTCTCCAGCAATCAGCTGCCAGTTGCGGCGATGTTGCTCGGGATGCCCTTCCATCGATTTAAACa < 1:337061/249‑1 (MQ=255) cGTCCATATTCTTCCAGGTGTTACGCAGAAATTGTTCCAGTAACTGTTGCTCAATCTCAAACGTAGACATCTCTTTGTCGGCTTTCAGCTTCAATCGTTTTGAAACAT‑CGAGCAAAATGGCCCGATACAAGTTACCGTGTTCGCGCAGTTTGTTGGCGATACTATCGCCTCCAAAATGCTGTAATTCTCCAGCAATCAGCTGCCAGTTGCGGCGATGTTGCTCGGGATGCCCTTCCATCGATTTAAACAg < 1:353339/250‑1 (MQ=255) ccATATTCTTCCAGGTGTTACGCAGAAATTGTTCCAGTAACTGTTGCTCAATCTCAAACGTAGACATCTCTTTGTCGGCTTTCAGCTTCAATCGTTTTGAAACAT‑CGAGCAAAATGGCCCGATACAATTTACCGTGTCCGCGCAGTTTGTTGGCGATACTATCGCCACCAAAATGCTGTAATTCTCCAGCAATCAGCTGCCAGTTGCGGCGATGTTGCTCGGGATGCCCTTCCATCGATTTAAACAGTTc < 1:275591/250‑1 (MQ=255) | TGACCGCTTTAACCCCATTTAGTGCCGCACCTACAGGGCCTCCCAGCCCCGCGCCGCGCAGCAAACCATGCCCAAGTACGCTCATTGCTGCGTGGGTGCGTAAAATGCGGGTCAGTTGGCTGGAAAGCAAATGCGACACACCTTTTGCCAATAATTTGTCTTTCATCAGCAGCGGCAGCAGCTCTTCCAGCTCATTCACCCTGGCATCGACCGCGTGCAGAAACTCCTGCTTATGTTCCTCGTCCATTTTCTTCCAGGTATTACGCAGAAATTGTTCCAGTAACTGTTGCTCAATTTCAAACGTAGACATCTCTTTGTCGGCTTTCAGCTTCAATCGCTTTGAAACAT‑CGAGCAAAATGGCCCGATACAATTTACCGTGTCCGCGCAGTTTGTTGGCGATACTATCGCCACCAAAATGCTGTAATTCTCCGGCAATCAGCTGCCAGTTGCGGCGATGTTGCTCGGGATGCCCTTCCATCGATTTAAACAGTTC > NC_000913/10726‑11218 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |