| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 9,851 | A→T | A182A (GCA→GCT) | mog → | molybdopterin adenylyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 9,851 | 0 | A | T | 96.0% | 59.6 / ‑3.6 | 25 | A182A (GCA→GCT) | mog | molybdopterin adenylyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base T (15/9); total (15/10) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.00e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.19e-01 | |||||||||||
ATCAGCCTGCATTTTGTACCAACTGCGATCCTTTCGCGTCAGGTGGGCGTGATTCGCAAACAGGCGCTGATCCTTAACTTACCCGGTCAGCCGAAGTCTATTAAAGAGACGCTGGAAGGTGTGAAGGACGCTGAGGGTAACGTTGTGGTACACGGTATTTTTGCCAGCGTACCGTACTGCATTCAGTTGCTGGAAGGGCCATACGTTGAAACGGCACCGGAAGTGGTTGCAGCATTCAGACCGAAGAGTGCAAGACGCGACGTTAGCGAATAAAAAAATCCCCCCGAGCGGGGGGATCTCAAAACAATTAGTGGGATTCACCAATCGGCAGA‑ACGGTGCGACCAAACTGCTCGTTCAGTACTTCACCCATCGCCAGATAGATTGCGCTGGCACCGCAGATCAGCCCAATCCAGCCGGCAAAGTGGATGATTGCGGCGTTACCGGCAATGTTACCGATCGCCAGCAGGGCAAACA > NC_000913/9621‑10094 | ataaGCCTGCATTTTGTACCAACTGCGATCCTTTCGCGTCAGGTTGGTGTGATTCGCAAACAGGCGCTGATCCTTAACTTACCCGGTCAGCCGAAGTCTATTAAAGAGACGCTGGAAGGTGTGAAGGACGCTGCGGGAAACGTTGTGGTACACGGTATTTTTGCCAGCGTACCGTACTGCATTCAGTTGCTGGAAGAGCCATACGTTGAAACGGCACCGGAAGTGGTGGCTGAATTAAGACCGAAGAGTgg > 1:97302/4‑250 (MQ=255) tttttGTACCAACTGCGATCCTTTCGCGTCAGGTTGGTGTGATTCGCAAACAGGCGCTGATCCTTACCTTACCCGGTCAGCCGAAGTCTATTAAAGAGACGCTGGAAGGTGTGAAGGACGCTGCGGGTAACGTTGTGGTACACGGTATTTTTGCCGGCGTACCGTACTGCATTCAGTTGCTGGACTGGCCATACGTTGTACCGTCGCCACAAGTTGTTGCTGCATTCAGCACGAAGAGTGCAAGACGCGAc > 2:4849/2‑251 (MQ=255) tGTACCAACTGAGCTCCTTTCTCGTCAGGGGGGCGTGATACGCAAACAAGCGCTGATCCTTAACTTACACGGTCAACCGAAGTCTATTAAAGAGACGCTGGAAGGAGTGAAGGACGCTGAGGGAAACGGTGTGGTACACGGTATATTTGCCAGCGGACCGTACTGCGTTAAGTTGCTGGAATGGCCATACGTTGAAACGGCACCGGGAGTGGTTGCTGCATTAAGACCGCAGAGTGCAAGAcgctaacgt > 2:21769/1‑244 (MQ=255) gTACCAACTGCGATCCTTTCGCGTCAGGTTGGTGTGATTCGCAAACAGGCGCTGATCCTTAACTTACCCGGTCAGCCGAAGTCTATTAAAGAGACGCTGGAAGGTGTGAAGGACGCTGCGGGTAACGTTGTGGTACACGGTAATTTTGCCAGCGTACCGTACTGCATTCAGTTGCTGGAAGGGCCATACGTTGAAACGGCACCAGAAGTGGTTGCTGCATTCAGACCGAAGAGTGCAAGACGCGACGTTa < 1:190171/250‑1 (MQ=255) gATCCTTTCGCGTCAGGTTGGTGTGATTCGCAAACAGGCGCTGATCCTTAACTTACCCGGTCAGCCGAAGTCTATTAAAGAGACGCTGGAAGGTGTGAAGGACGCTGCGGGTAACGTTGTGGTACACGGTATTTTTGCCAGCGTACCGTACTGCATTCAGTTGCTGGAAGGGCCATACGTTGAAACGGCACCAGAAGTGGTTGCTGCATTCAGACCGAAGAGTGCAAGACGCGACGTTAGCGAATaaaaa > 1:7056/1‑250 (MQ=255) gATCCTTTCGCGTCAGGTTGGTGTGATTCGCAAACAGGCGCTGATCCTTAACTTACCCGGTCAGCCGAAGTCTATTAAAGAGACGCTGGAAGGTGTGAAGGACGCTGCGGGTAACGTTGTGGTACACGGTATTTTTGCCAGCGTACCGTACTGCATTCAGTTGCTGGAAGGGCCATACGTTGAAACGGCACCAGAAGTGGTTGCTGCATTCAGACCGAAGAGTGCAAGACGCGACGTTAGCGAATaaaaa > 1:313616/1‑250 (MQ=255) tcgtgTCAGGTTGGTGGGATTCGCAAACAGGCGCTGATCCTTAACTTACCCGGTCAGCCGAAGTCTATTAAAGATACGCTGGAAGGTGTGAAGGACGCTGCGGGTAACGTTGTGGTACACGGTATTTTTGCCTGCGTACCGTACTGCAGTCAGTTGCTGGAAGGGCCATACGTTGAAACGGCACCAGAAGTTGTTGCTGCATTCAGACCGAAGAGTGCAAGACGCGACGTTAGCGAATAAAAAAATcccc < 1:254936/246‑1 (MQ=255) gtgTGATTCGCAAACAGGCGCTGATCCTTAACTTACCCGGTCAGCCGAAGTCTATTAAAGAGACGCTGGAAGGTGTGAAGGACGCTGCGGGTAACGTTGTGGTACACGGTATTTTTGCCAGCGTACCGTACTGCATTCAGTTGCTGGAAGGGCCATACGTTGAAACGGCACCAGAAGTGGTTGCTGCATTCAGACCGAAGAGTGCAAGACGCGACGTTAGCGAATAAAAAAATCCCCCCGAGCGGGGGGa > 1:146154/3‑250 (MQ=255) gggTGATTCGCAAACAGGCGCGGATCCTTACCTTACCCGGTCAGCCGAAGTCTATTAAAGAGACGCTGGAAGGTGTGAAGGACGCTGCGGGTAACGTTGTGGTACACGGTATTTTTGCCAGCGTACCGTACTGCATTCAGTTGCTGGAAGGGCCATACGTTGAAACGGCACCAGAAGTGGTTGCTGCATTCAGACCGAAGAGTGCAAGACGCGACGTTAGCGAATAAAAAAATCCCCCCGAGCGGGGGGa < 2:146154/248‑1 (MQ=255) cgcTGAGCCTTAACTTACCCGGTCAGCCGCAGTATATTAAAGAGACGATGGAAGGTGTGAAGGACGCTGCGGGAAACGTTGAGGTACACGGTATTTTTGCCAGCGTACCGTACTGCATTCAGTTGCTGGAAGGGCCATACGTTGAAAAGGCAACAGAAGTGGTTGCTGCATTAAGACCGAAGAGTGCAAGACGCGTCGTTACCGAATAAAAAAATCCACCCGGGCGGGGGGATCTCAAAACAATTAGTggg > 1:28688/1‑251 (MQ=255) tGATCCTTAACTTACCCGGTCAGCCGAAGTCTATTAAAGAGACGCTGGAAGGTGTGAAGGACGCTGCGGGTAACGTTGTGGTACACGGTATTTTTGCCAGCGTACCGTACTGCATTCAGTTGCTGGAAGGGCCATACGTTGAAACGGCACCAGAAGTGGTTGCTGAATTCAGACCGAAGAGTGCAAGACGCGACGTTAGCGAATAACAAAATCCCCACGAGCGGGGGGATCTCAAAACAATTAGTGGGAtt > 2:78923/1‑251 (MQ=255) tAACTTACCCGGTCAGCCGAAGTCTATTAAAGAGACGCTGGAAGGTGTGAAGGACGCTGCGGGTAACGTTGTGGTACACGGTATTTTTGCCAGCGTACCGTACTGCATTCAGTTGCTGGAAGGGCCATACGTTGAAACGGCACCAGAAGTGGTTGCTGCATTCAGACCGAAGAGTGCAAGACGCGACGTTAGCGAATAAAAAAATCCCCCCGAGCGGGGGGATCTCAAAACAATTAGTGGGATTCACCa < 1:78923/249‑1 (MQ=255) gTCAGCCGAAGTCTATTAAAGAGACGCTGGAAGGTGTGAAGGACGCTTCGGGACACGTTGTGGGACACGGTATTTTTGCCAGCGTACCGTACTGCATTCAGTTGCTGGACGGGCCATACGTTGAAACGGCACCAGAAGGGGTTGCTGCATTCAGAACGAAGAGTGCAAGACGCGACGTTAGCGTATAAAAAAATCCCCCCGAGCGGGGGGATATCAAAACAATTCGTGGGGTTCACCAATCGGCAGA‑ACgg > 1:218532/1‑251 (MQ=255) tATTAAAGAGACGCTGGAAGGTGTGAAGGACGCTGCGGGTAACGTTGTGGAACACGGTATTTTTGCCAGCGTACCGTACTGCATTCAGTTGCTGGAAGGGCCATACGTTGAAAAGGCACCAGAAGTGGTTGCTGCATTCAGACCGAAGAGTGCAAGACGCGACGTTAGCGACTAAAAAAATCCCCCCGAGCGGGGGGATCTCAAAACAATTAGTGGGATTCACCAATCGTCCGACACG‑TGCGACCAAACtc > 2:334544/1‑250 (MQ=255) agaCGCTGGAAGGTGTGAAGGACGCTGCGGGTAACGTTGTGGTACACGGTATTTTTGCCAGCGTACCGTACTGCATTCAGTTGCTGGAAGGGCCATACGTTGAAACGGCACCAGAAGTGGTTGCTGCATTCAGACCGAAGAGTGCACGACGCGACGTTAGCGAATAAAAAAATCCCCCCGAGCGGGGGGAtct > 2:309135/1‑193 (MQ=255) agaCGCTGGAAGGTGTGAAGGACGCTGCGGGTAACGTTGTGGTACACGGTATTTTTGCCAGCGTACCGTACTGCATTCAGTTGCTGGAAGGGCCATACGTTGAAACGGCACCAGAAGTGGTTGCTGCATTCAGACCGAAGAGTGCAAGACGCGACGTTAGCGAATAAAAAAATCCCCCCGAGCGGGGGGAtct < 1:309135/193‑1 (MQ=255) ggtatggTGTGAATTACGTTGCGGGTAACGTTGTGGTACACGGTATTTTTGGCAGCTTACCGTACGGCATTCAGTTGCTGGAAGGGCCATTCGTGGAAACGGCACCAGAAGTGGTTGCTGCATTCAGACCGAAGAGTGCAAGACGCGGCGTTAGCGAATAAAAAAATCCCCCCGAGCGTGGGGATCTCAAAGCAATTAGGGGGATTCACTAAGCGGCAGA‑ATGTTGCGACCAAACTGCTCGTTCAGTACtt < 2:191783/246‑1 (MQ=255) aaGGTGTGAAGGACGCTGCGGGTAACGTTGTGGTACACGGTATTTTTGACAGCGTACCGTACTGCATTCAGTTGCTGGAAGGGCCATACGTTGAAACGGCACCAGAAGTGGTTGCTGCATTCAGACCGAAGAGTGCAAGACGCGACGTTAGCGAATAAAAAAATCCCCCCGAGCGGGGGGATCTCAAAACAATTAGTGGGATTCACCAATCGGCAGA‑ACGGTGCGACCAAACTGCTCGTTCAGTACTTCAc > 1:144263/1‑251 (MQ=255) cgggTAACGTTGTGGTACACGGTATTTTTGCCAGCGTACCGTACTGCATTCAGTTGCTGGAAGGGCCATACGTTGAAACGGCACCAGAAGTGGTTGCTGCATTCAGACCGAAGAGTGCAAGACGCGACGTTAGCGAATAAAAAAATCCCCCCGAGCGGGGGGATCTCAAAACAATTAGTGGGATTCACCAATCGGCAGA‑ACGGTGCGACCAAACTGCTCGTTCAGTACTTCACCCATCGCCAGATAGATTg < 1:334544/250‑1 (MQ=255) cagTAACGTTGTGGTACACGGTATTTTTGCCTGCGCAACGTACTGAATTCAGTTGCTGGAAGGGCCATACGTTGCAACAGCACCAGACGTCGTTGCTGCATTCAGACCGAAGAGTGCAAAACGCGACGTTAGCGAATAAAAAAATCCCCCCGAGCGGGGGAATCTCAAAACAATTAGTGGGATTCACAAATCGGCAGC‑ACGAGGCGACCAAACAGCACGTTCAGTACTTCACCCATGACCGGATAGATTg > 2:348456/3‑250 (MQ=255) cGTTGTGGTACACGGTATTTTTGCCAGCGTACCGTACTGCATTCAGTTGCTGGAAGGGCCATACGTTGAAACGGCACCAGAAGTGGTTGCTGCATTCAGACCGAAGAGTGCAAGACGCGACGTTAGCGAATAAAAAAATCCCCCCGAGCGGGGGGATCTCAAAACAATTAGTGGGATTCACAAATCGGCAGA‑ACGGTGCGACCAAACTGCTCGTTCAGTACTTCACCCATCGCCAGATAGATTGCACTGGc > 1:160/1‑251 (MQ=255) cGTTGTGGTACACGGTATATTTGCCAGCGTACCGTACTGCAATCAGTTGCTGGAAGGGCCAGACGTTGAAACGGGTACAGAAGTGGTTGCTGCAGTCAGACCGAAGAGTGCAAGACGCGACGTTAGCGAATAAAAAAATCCCCCCGATCGGGGGTATCTCAAAACAATTAGTGGGATTCACCAATCGGCAGA‑ACGGTGCGACCAAACTGCTCGTTGAGTACTTCACCCATCGCCAGATAGATTGCACTGGc < 2:139644/251‑1 (MQ=255) ccATACGTTGAAACGGCACCGGAAGTGGTTGCAGCATTCAGACCGAAGAGTGCAAGACGCGACGTTAGCGAATAAAAAAATCCCCCCGAGCGGGGGGATCTCAAAACAATTAGTGGGATTCACCAATCGGCAGA‑ACGGTGCGACAAAACTGCTCGTTCAGTACTTCACCCATCGCCAGATAGATTGCGCTGGCACCGCAGATCAGCACAATCCAGCCGGCAAAGTGGATGATTGCGGCGTTACCGGCAATg < 1:21769/251‑1 (MQ=255) accagAAGTGGTTGCTGCATTCAGACCGAAGAGTGCAAGACGCGACGTTAGCGAATAAAAAAATCCCCCCGAGCGGGGGGATCTCAAAACAATTAGTGGGATTCACCAATCGGCAGA‑ACGGTGCGACCAAACTGCTCGTTCAGTACTTCACCCATCGCCAGATAGATTGCACTGGCACCACAGATCAGACCAATCCAGCCGGCAAAGTGGATGATTGCGGCGTTACCGGCAATGTTACCGATCGCcagc > 1:250437/5‑249 (MQ=255) ggTTGCTGAATTCAGACCGAAGAGTGCAAGACGCGACGTTAGCGAATAAAAAAATCCCCCCGAGCGGGGGGATCTCAAAACAATTAGTGGGATTCACCAATCGGCAGA‑ACGGTGCGACCAAACTGCTCGTTCAGTACTTCACCCATCGCCAGATAGATTGCACTGGCACCACAGATCAGACCAATCCAGCCGGCAAAGTGGATGATTGCGGCGTTACCGGCAATGTTACCGATCGCCAGCAGGGCAAACa < 2:7056/250‑1 (MQ=255) | ATCAGCCTGCATTTTGTACCAACTGCGATCCTTTCGCGTCAGGTGGGCGTGATTCGCAAACAGGCGCTGATCCTTAACTTACCCGGTCAGCCGAAGTCTATTAAAGAGACGCTGGAAGGTGTGAAGGACGCTGAGGGTAACGTTGTGGTACACGGTATTTTTGCCAGCGTACCGTACTGCATTCAGTTGCTGGAAGGGCCATACGTTGAAACGGCACCGGAAGTGGTTGCAGCATTCAGACCGAAGAGTGCAAGACGCGACGTTAGCGAATAAAAAAATCCCCCCGAGCGGGGGGATCTCAAAACAATTAGTGGGATTCACCAATCGGCAGA‑ACGGTGCGACCAAACTGCTCGTTCAGTACTTCACCCATCGCCAGATAGATTGCGCTGGCACCGCAGATCAGCCCAATCCAGCCGGCAAAGTGGATGATTGCGGCGTTACCGGCAATGTTACCGATCGCCAGCAGGGCAAACA > NC_000913/9621‑10094 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |