| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,509,586 | 0 | A | C | 65.1% | 40.6 / 20.2 | 43 | pseudogene (108/315 nt) | insO | IS911B regulator fragment |
| Reads supporting (aligned to +/- strand): ref base A (9/6); new base C (14/14); total (23/20) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.49e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GACCTGTTCGCAAGAAAACCAGTGGGCTGGGCCATGTCGTTCTCGCCGGACAGCAGGCTTACCATGAAAGCACTGGAAATGGCATGGGAAACCCGTGGTAAGCCCGTCGGGGTGATGTTCCA‑AG‑CGATCAAGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTACTGTGGCGATACCGGATCAGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGATAACAG‑CCCAATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAG‑CGACGGGCTATGTAAGCTTCAGCGATG‑CAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGG > NC_000913/4509357‑4509823 | gACCTGTTCGCAAGAAAACCAGTGGGCTGGGCCATGTCGTTCTCGCCGGACAGCAGGCTTACCATGAAAGCACTGGAAATGGCATGGGAAACCCGTGGTAAGCCCGTCGGGGTGATGTTCCA‑AG‑CGATCAAGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTACTGTGGCGATACCGGATCAGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGATAACAG‑CCCCATGGAGCGCTTCTTCAGGAgg > 1:287970/1‑250 (MQ=255) aaaCCAGTGGGCTGGGCCATGTCGTTCTCGCCGGACAGCAGGCTTACCATGAAAGCACTGGAAATGGCATGGGAAACCCGTGGTAAGCCCGTCGGGGTGATGTTCCA‑AG‑CGATCAAGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTACTGTGGCGATACCGGATCAGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGATAACAG‑CCCCATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAATgg < 1:224272/251‑1 (MQ=255) aaaCCAGGGGGCTGGGCCATGGCGTTCTCGACGGACAGCAGGCTTACTATGAAAGCACTGGAAATGGCATGGGAAACCCGGTGTTAGCCCGTCTGGGGGATGTTCCA‑AG‑CGATCGAGGCAGTCATTATACGAGCAGGCATTTCCGGCAGTTACTGTGGCTATACCGGATCATGCAGAGGATGAGTCGGCGTGGAAACTGCTGGGATCACAG‑CCTCATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAATgg < 2:370741/251‑1 (MQ=255) gTTCTCGCCGGACAGCAGGCTTACCATGAAAGCACTGGAAATGGCATGGGAAACCAGTGGTAAGCCCGTCGGGGTGATGTTCCA‑AG‑CGATCAAGGCAGTCATTATACGAGCAGGCAGTTTCGGCAGTTACTGTGGCGATACCGGCTCCGGCAGAGTATGAGTCGGCGGGGGAACTGCTGGGATCACCG‑CCCCATGGAGCGCTTTTTCCGGAGTCTGAAGACCGAATGGGTGCCAG‑CGCCGGGCTAttta > 2:105751/1‑246 (MQ=255) gACAGCAGGCTTACCATGACAGAACTGGAAATGGCATGGGAAACCCGTGGTAAGCACGTCGGGGTGATGTTACA‑AG‑CGATCAAGGCAGTCATTATACGAGCAGGCAGATCCGGCAGTTACTTTGGCGATACAGGATAAGGAAGTGTAAGGGTCGGAGTGGGAACTGCTGGGATAACAGACCCAA‑GGAGAGCTTCTTAAGGAGTAAGAAGAAAGAATGGGTGCCAG‑CGACGGGcatttgaagctgacgcg > 2:291253/1‑233 (MQ=255) gACAGCAGGCTTACCATGAAAGCACTGGAAATGGCATGGGAAACCCGTGGTAAGCCCGTCGGGGTGATGTTCCA‑AG‑CGATCAAGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTACTGTGGCGATACCGGATCAGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGATAACAG‑CCCCATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAG‑CGACGGGCTATGTAAGCTTCAGCGAt < 1:262799/251‑1 (MQ=255) aCAGCAGGCTCACCATGAAAGCGCTGGAAATGGCATGGGAAACCCGTGGTAAGCCCGGCGGGGTGATGTTCCACAG‑CGATCAGGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTATTGTGGCGATACCAGATCAGACAGAGTATGAGCCGGCGCGGAAACTGCTGGGATAACAG‑CCCAATGGCACGCTTCTTCCGGAGTCTGAAGAACGAATGGATGCCGG‑TGGTGGGTTACGTAAGCTTCAGCg > 1:364391/1‑249 (MQ=255) agcagGCTTACCATGAAAGCACTGGAAATGGCATGGGAAACCCGTGGTAAGCCCGTCGGGGTGATGTTCCA‑AG‑CGATCAAGGCAGTAATTATACGAGCAGGCAGTTCCGGCAGTTACTGTGGCGATACCGGATCAGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGATAACAG‑CCCCATGGAGCGCTTCTTCAGGAGTCTGAAGAAAGAATGGGTGCCAG‑CGACGGGCTATGTAAGCTTCAGCGATG‑c > 1:245482/1‑250 (MQ=255) ccATGCAAGCACTGGAAATGGAATGGGAACCCCGTAGTACGCCCGACGGGGTGATGTTCCA‑AG‑CGATCAAGGCCGTCATTATACGAGAAGGCAGTTACGGCAGATACTGTGGCGGAACCGGCTCAGGCAGAGGATGAGTCGGCGTGGAAACTGCTGGGATAACAG‑CCAAATGGAGCGCTTCTTCAGGAGTGTGAAGAACGATTGGGAGCCAG‑CGACGGGCTATGTAAGATTCAGCGATG‑CAGcgcatgaa > 2:20462/1‑243 (MQ=255) aaTGGCATGGGAAACCCGTGGTAAGCCCGGCGGGGTGATGTTCCACAG‑CGATCAGGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTATTGTGGCGATACCAGATCAGACAGAGAATGAGCCGGCGCGGAAACTGCTGGGATAACAG‑CCCAATGGAACGCTTCTTCAGGAGTCTGAAGAAAGAATGGATGCCGG‑TGGTGGGTTACGTAAGCTTCAGCGAGG‑CAGCTCACGCCCTAACGGACTATATCg > 1:360122/1‑251 (MQ=255) aTGGCATGGGAAACCCGTGGTAAGCCCGGCGGGGTGATGTTCCACAG‑CGATCAGGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTATTGTGGCGATACCAGATCAGACAGAGTATGAGCCGGCGCGGAAACTGCTGGGATAACAG‑CCCAATGGAACGCTTCTTCAGGAGTCTGAAGAACGAATGGATGCCGG‑TGGTGGGTTACGTAAGCTTCAGCGAGG‑CAGCTCACGCCATAACGGGCTATATCGt > 1:285540/1‑251 (MQ=255) ggCATGGGAAACCCGTGGTAATCCCGTCGGGGTGATGTTCCA‑AG‑CGATCAAGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTACTGTGGCGATACCGGATCAGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGATAACAG‑CCCCATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAG‑CGACGGGCTATGTAAGCTTCAGCGATG‑CAGCTCACGAAATAACGGACTATATCGtta < 2:88809/250‑2 (MQ=255) ggCATGGGAAACCCGTGGTAAGCCCGTCGGGGTGATGTTCCA‑AG‑CGATCAAGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTACTGTGGCGATACCGGATCAGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGATAACAG‑CCCAATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAG‑CGACGGGCTATGTAAGCTTCAGCGATG‑CAGCTCATGCAATAACGGACTATATCGTTgg < 1:20462/251‑1 (MQ=255) gCATGGGAAACCCGTGGTAAGCCCGTCGGGGTGATGTTCCA‑AG‑CCATCAAGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTACTGTGGCGATACCGGATCAGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGATAACAG‑CCCCATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAG‑CGACGGGCTATGTAAGCTTCAGCGATG‑CAGCTCACGCAATAACGGACTATATCGTTGGa < 1:79447/251‑1 (MQ=255) cATGGGAAACCCGTGGTAAGCCCGTCGGGGTGATGTTCCA‑AG‑CGATCAAGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTACTGTGGCGATACCGGATCAGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGATAACAG‑CCCCAGGGAGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAG‑CGACGGGCTATGTAAGCTTCAGCGATG‑CAGCTCACGCAATAACGGACTATATCGTTGGat < 1:348918/251‑1 (MQ=255) aTGGTAAACCCGCGGTAATCACGTCGTGGTGATGTTCCA‑AT‑GTATTAAGGCAGTCATTATACGAACAGGTAGTTCCGGCAGTTAATGTGGCGATACCGGATCAGGCAGAGTAGGAGTCGGCGTGGAAACTGCTGGGATAACAG‑CTCCATGGAGCGCTGCTTCAGGAGTCTGAAGAACGAATGGGTGCCAG‑CGACGGTCTATGTAAGCTTAAGCGATG‑CAGCTCACGCAAGAACGGACTATATCGTTTGata < 2:113433/251‑1 (MQ=255) tggAAACCCGTGGTAAGCCCGTCGGGGTGATGTTCCA‑AG‑CGATCAAGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTACTGTGGCGATACCGAATCAGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGGTAACCG‑CCCCATGGGGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGGTACAG‑CGCCGGGCTATGTAAGATTCCGCGATGACA‑CTCACGCAATATCGGACTATACCGTTGTATAtt > 2:223629/2‑251 (MQ=255) ggAAACCCGTGGTAAGCCCGTCGGGGTGATGTTCCA‑AG‑CGATCAAGGCAGTCATTATACAAGCAGGCAGTTCCGGCAGTTACTGTGGCGATACCGGATCAGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGATAACAG‑CCCAATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAG‑CGACGGGCTATGTAAGCTTCAGCGATG‑CAGCTCACGCAATAACGGACTATATCGTTGGATAtt > 1:234765/1‑250 (MQ=255) gAAACCCGTGGTAAGCCCGTCGGGGTGATGTTCCA‑AG‑CGATCAAGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTACTGTGGCGATACCGGATCAGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGATAACAG‑CCCCATGGAGCGcttctt < 2:326225/157‑1 (MQ=255) gAAACCCGTGGTAAGCCCGTCGGGGTGATGTTCCA‑AG‑CGATCAAGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTACTGTGGCGATACCGGATCAGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGATAACAG‑CCCCATGGAGCGcttctt > 1:326225/1‑157 (MQ=255) cccggtttAAGCCCGTGGGGTTGATTGTCCA‑CGGCGATCAGGGCTGTCATTATACGTGAAGGCAGTTCCGGCAGTTGTTGTTGCGATACCAGATCAGACAGAGTATGAGGCGGCGCGGAATCTGTGGGGATAACAG‑CCCAATGGAACGCGTCTTCAGGAGTCTGAAGAACTAATGGAGGCCGG‑TGGTGGGTTACTTAAGCTACACCGAGG‑CAGCTCTCGCCATAACGGACTATATCGTTGGATATTACAgc < 2:364126/244‑1 (MQ=255) gTGGTAAGCCCGGCGGGGTGATGTTCCACAG‑CGATCAGGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTATTGTGGCGATACCAGATCAGACAGAGTATGAGCCGGCGCGGAAACTGCTGGGATAACAG‑CCCAATGGAACGCTTCTTCAGGAGTCTGAAGAACGAATGGATGCCGG‑TGGTGGGTTACGTAAGCTTCAGCGAGG‑CAGCTCACGCCATAACGGACTATATCGTTGGATATTACAgcgcc > 1:827/1‑250 (MQ=255) gTAAGCCCGGCGGGGGGATGTTCCACAG‑CGATCAGGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTATTGTGGCGATCCCAGATCAGAAAGAGTATGAGCCGGCGAGGAAACTGCTGGGATAACAG‑CCCAATGGAACCCTTATTCAGGAGTCTGAAGAAAGAATGGATGCCGG‑GGGGGGGTTAGGTAAACTTTAGCGAGG‑CAGCTCACGCCCACACGGGCTATAACGTTGGGTATTAAAGCGCaat > 2:302225/1‑248 (MQ=255) gTCGGGGTGATGTTCCA‑AG‑CGATCAAGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTACTGTGGCGATACCGGATCAGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGATAACAA‑CCCCATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAG‑CGACGGGCTATGTAAGCTTCAGCGATG‑CAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCAc > 1:67074/1‑251 (MQ=255) cGGGGTGATGTTCCA‑AG‑CGATCAAGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTACTGTGGCGATACCGGATCAGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGATAACAG‑CCCCATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAG‑CGACGGGCTATGTAAGCTTCAGCGATG‑CAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACg < 1:250639/250‑1 (MQ=255) ggggTGATGT‑CCA‑AG‑CGATCAAGGCAGTCATTATACGAGCAGGCAGTTCCGGAAGTTACTGTGGCGATACCGGATCAGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGATAACAG‑CCCCATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAG‑CGACGGGCTATGTAAGCTTCAGCGATG‑CAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGaa > 1:341130/1‑250 (MQ=255) aggttgcA‑AG‑CGATCAAGGCATTCATTATACGAGCAGGAAGTTCCGGCAGTTACTGGGGTGACACCGGAGCAGGCAGAGTATGAGTCGGCGTGGAAACTGCGGGGATAACAG‑CCCCATGGAGCGCTTCTTCAGTAGTCTGAAGAACGCATGGGTGTCAG‑CGACGGGCTATGTAAGCTTCAGCGATG‑CAGCTCATGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGTACGAATATAAt < 2:192224/245‑1 (MQ=255) tccacaG‑CGATAAGGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTCCTGTGGCGATACCAGATCAGAACGAGTATGAGCCGGCGCGGAAACTGCAGGGATAACAG‑CCCCATGGAACACTTCTTCAGGCGTCTGAAGAACGACTGGATGCCGGACG‑GGGGTTACGTCAGCTTCAGCGAGG‑CAGCTCACGCAATAACGTCCTATATCGATGGATATTACCGCGCACTAAAACCGCACGAAcatatcggt > 2:154406/6‑246 (MQ=255) cATTATACGAGCAGGCAGTTCCGGCAGTTATTGTGGCGATACCAGATCAGACAGAGTATGAGCCGGCGCGGAAACTGCTGGGATAACAG‑CCCAATGGAACGCTTCTTCAGGAGTCTGAAGAACGAATGGATGCCGG‑TGGTGGGTTACGTAAGCTTCAGCGAGG‑CAGCTCACGCCATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAACGGTGGGTTACCCCCAAACGAATc < 1:297518/251‑1 (MQ=255) aCGAGCAGGCAGTTCCGGCAGTTATTGTGGCGATACCAGATCAGACAGAGTATGAGCCGGCGCGGAAACTGCTGGGATAACAG‑CCCAATGGAACGCTTCTTCAGGAGTCTGAAGAACGAATGGATGCCGG‑TGGTGGGTTACGTAAGCTTCAGCGAGG‑CAGCTCACGCCATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAACGGTGGGTTACCCCCAAACGAATCGGaaa < 1:61232/250‑1 (MQ=255) caggcagTTCCGGCAGTTACTGTGGCGATACCGGATCAGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGATAACAG‑CCCCATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAG‑CGACGGGCTATGTAAGCTTCAGCGATG‑CAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGAt < 1:301604/251‑1 (MQ=255) aGTTACTGAGGCGATACCGGATCAGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGATAACAG‑CCCCATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAG‑CGACGGGCTATGTAAGCTTCAGCGATG‑CAGCTCACGCACTAACGGCCTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGTATCAGACACCCGCTACTGGAAAAActat > 1:45791/1‑249 (MQ=255) gTTACTGGGGCGATACCGGATCAGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGATAACAG‑CCCCATGGAGCGCTTCTTCATTAGTCTGAAGAACGAATGGGTGCCAG‑CTACGGGCTATGTAAGCTTCAGCGATG‑CAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTa < 1:152114/251‑1 (MQ=255) aCTGTGGCGATACCGGATCAGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGATAACAG‑CCCCATGGGGCGCTTCTTCAGGAGTATGAAGAACGCATGGGTGCCAG‑CGACGGGCTATGTACGCTTCAGCGATG‑CAGCTCACGCAATAACGGACTATCTCGTTGGATATTACAGCGCACTAAGACCGCACGCATATAATGGTGGGTTATAACCAAACGAATCAGCAAAACGTTACTGGAAAAACTCTAAc > 2:564/1‑250 (MQ=255) tgtgGCGATACCGGATCAGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGATAACAG‑CCCCATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAG‑CGACGGGCTATGTAAGCTTCAGCGATG‑CAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGCAAATAATGGTGGGTTACCACCAAAAGAATCAGAAAACCGATACTGGAAAAACTCTAAcgcg > 2:360054/1‑251 (MQ=255) ccGGATCAGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGATAACAG‑CCCCATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAG‑CGACGGGCTATGTAAGCTTCAGCGATG‑CAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGATGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCCGAGGCCAGtt > 2:159464/1‑251 (MQ=255) aTCAGACAGAGTATGAGCCGGCTCGGAAACTGCTGGGATAACAG‑CCCAATGGAACGCTTTTTCAGGAGTCTGAAGAACGAATGGATGCCGG‑TGGTGGGTTACGTAAGCTTCAGCGAGG‑CAGCTCACGCCATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAACGGTGGGTTACCCCCAAACGAATCGGAAAATCGATACTGGAAAAACTCTAACGCGGTGGCCAGtttttg < 1:70346/251‑3 (MQ=255) cAGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGATAACAG‑CCCCATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAG‑CGACGGGCTATGTAAGCTTCAGCGATG‑CAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGt < 1:170293/250‑1 (MQ=255) aGTCGGCGTGGAAACTGCTGGGATAACAG‑CCCCATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAG‑CGACGGGCTATGTAAGCTTCAGCGATG‑CAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGAc > 1:383012/1‑251 (MQ=255) gcgcggAAACTGCTGGGATAACAG‑CCCAAGAGAACGCGGCTTCAGGAGTCTGAAGAACGAAGGGATGCCGG‑TGGGGGGTTACGTAAGCTTCAGCGAGG‑CAGCTCACGCCATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAACGGTGGGTTACCCCCAAACGAATCGGAAAATCGATACTGGAAAAACTCTAACGCGGTGGCCAGTTTTTGTTGACcacttcaagagaaaa < 1:60074/247‑13 (MQ=255) aaCTGCTGGGATAACAG‑CCCAATGGAACGCTTCTTCAGGAGTCTGAAGAACGAATGGATGCCGG‑TGGTGGGTTACGTAAGCTTCAGCGAGG‑CAGCTCACGCCATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAACGGTGGGTTACCCCCAAACGAATCGGAAAATCGATACTGGAAAAACTCTAACGCGGTGGCCAGTTTTTGttaacaacttcaagagaaaagaaccg > 1:180679/1‑226 (MQ=255) gtctgGGGTACCAG‑CCCCATGGTGCTCTTCTTCAGGAGTATGAGGAACGAATGGGTTCCAC‑CGATGGGCTATGTAAGCTACAGCGATG‑CAGCTCACGCAATAACGGACGATTTCGTTGGATAGTTCAGCGCACTAAGACCGCACGAATATAATGTTGGGTTACCACCAAACTAAGCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGTCCAGTTTTATTTGACCACAACAGACTACCTGAATGGAGcc < 2:334752/249‑1 (MQ=255) gggATAACAG‑CCCCATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAG‑CGACGGGCTATGTAAGCTTCAGCGATG‑CAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCgg > 1:45870/1‑251 (MQ=255) | GACCTGTTCGCAAGAAAACCAGTGGGCTGGGCCATGTCGTTCTCGCCGGACAGCAGGCTTACCATGAAAGCACTGGAAATGGCATGGGAAACCCGTGGTAAGCCCGTCGGGGTGATGTTCCA‑AG‑CGATCAAGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTACTGTGGCGATACCGGATCAGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGATAACAG‑CCCAATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAG‑CGACGGGCTATGTAAGCTTCAGCGATG‑CAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGG > NC_000913/4509357‑4509823 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |