| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,815,883 | 1 | . | C | 79.4% | 73.7 / 14.4 | 35 | coding (667/687 nt) | rph | truncated RNase PH |
| Reads supporting (aligned to +/- strand): ref base . (3/4); new base C (16/11); total (20/15) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.72e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.97e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CGCCCGGTATTAAACAGCCCGGCGTTGAAGAAATAGGGGCTTTTGCGCCCGGATTTCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGA‑T‑T‑C‑CCC‑TCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCG > NC_000913/3815638‑3816131 | cgcCCGGTATTAAACAGCCCGGCGTTGAAGAAATAGGGGCTTTTGCGCCCGGATTTCAGCGTAAACTCGCCAAACTTTAACTCCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGA‑T‑T‑c‑cccctcgg < 1:355506/251‑6 (MQ=255) ccccGGTATTAAACAGCCCGGCGTTGAAGAAATAGGGGCTTTTGCGCCCGGAATTCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGCTATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTCTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGAGT‑C‑C‑CCC‑TCggg < 2:89275/250‑1 (MQ=255) gTATTAAACAGCCCGGCGTTGAAGAAATAGGGGCTTTTGCGCCCGGATTTCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGA‑T‑T‑C‑CCCCTCGGGCCaga < 1:144761/251‑1 (MQ=255) gCCCGGCGTTGAAGAAATAGGTGCTTTTGCGCCCGGATTTCAGCGTAAACTCGCCAAACTTTAACTCCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGTCTCATCATTCGCCTTAAAAATCAGTTTGCCATCGCCGCCTTCTGCGTCGCTACAATGGATTCGA‑T‑T‑C‑CCCCTCGGGCCAGAGCCAACAAGa < 1:227372/251‑1 (MQ=255) gCCCGGCGATGCAGAAATAGTGGATTATGAACCCGGATTTCAGCGTGAACTCGACAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTAGAGCTGATATGGTTTCATGACTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGACGACTCATCAGTCGCCTTAAAAAGATGTTTGCCAACGCCCGCTTCCTCGTCGCTCCAATGGATTAGA‑T‑TTC‑CCC‑Tcttgccagcgcccaca > 2:366944/1‑233 (MQ=255) tGAAGAAATAGGGGCTTTTGAGCCAGGATTTCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGAGCCGCCTTCTGCGTCGCTACAATGGATTCGA‑T‑T‑C‑CCCCTCGGGCCAGAGACAACAAGATGAGTAGct > 2:169916/1‑251 (MQ=255) aaaTAGGGGCTTTTGCGCCCGGATTTCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGA‑T‑T‑C‑CCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCa < 1:169916/251‑1 (MQ=255) gcgcCCGGATTTCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGA‑T‑T‑C‑CCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTc < 1:290993/251‑1 (MQ=255) cgcCCGGATTTCAGCGTAAACTCGCCAAACTGTAACGCCTGCTTGCTAAGCGCAAAGGCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTGTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTGGGCCAGCGCCGTCTTCTGGGTCTCTACAATGGATTCGA‑TGC‑C‑CCC‑TCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCg < 1:346308/251‑1 (MQ=255) cggaatgtagggtaacatctccAAACTTTAACCCCTGCTTGCTAATCTCAAATTCAATAAACTGGCGATGATATGGTGTCATGCCCTCGCTCCTCATCTTACTTTGCTACAGACAAAAAAAAGGCTACTCATCAGGCGCCTTAAAAATCAGTTTGCCAGCGCCTCCTTCTGCGTCGCTACAATGGATTCGA‑T‑T‑C‑CCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTGCATGGGTGACCGGCTCGCCtt < 2:194017/231‑1 (MQ=255) gATTTCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTATGCGTCGCTACAATGGATTCGA‑T‑T‑C‑CCCCTCGGGCCAGAGCCAACAAGATGAGTAGCACTTCCTGGGGGAACGGCCCGCCTTCt > 2:169026/1‑251 (MQ=255) ttCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCACCTTAAAAATCAGTTTGCCAACGCCGCCTTCTCCCTCGCTAAAATGGATTCGC‑T‑T‑C‑CCCCTCGGGCCAGAGCCAACAAGATGAGCAGCCCTTAATGGGGGAACGGCTCGCCTTCTGcc > 1:221836/1‑251 (MQ=255) cAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTCAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAACATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGT‑T‑T‑C‑CCCCTCGGGCCAGAGCCAACAAGATGATTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGACGt > 2:143012/1‑251 (MQ=255) gCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCATTCGCTCCTCATCTTACTTTTCTCCAGACAAAAAAAAGGCGACTCATCAGTCGACTTAAAAATCAGTTTGCCAGCGCCGCATACTGCGTCGATCCAATGGATTCGT‑T‑T‑C‑CCCCTCAGGCCAGAGCCAACAACATAAGTAGCTCTTCATGGGTGAACAGCTCGCCTTCTGCCTTCCACTGCACTTc > 1:45237/1‑251 (MQ=255) tgctAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGA‑T‑T‑C‑CCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTAATGGGTGAACGGCTCGCCTTCTGCCGTACCCTGCACTTCAATGGTGCGCCCGTCTTCgg > 1:240759/1‑251 (MQ=255) tttCTACAGACAAAAAAAAGTCGACTCATCAGTCGCCTTAAAAATCAGTTTGCAAGAGCCGCCTTCTGCATCGCTACAATGGATTCGA‑T‑T‑C‑CCCATCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCCTGGGTGAACGGCTCGCCTTCTGCCGTCCACTGCACTTCACTGTTGCTCACGTCTTCGTTCATAACTACGTTCCTGTCGGTCTCTGAGGCAGAGGCTTCAAAGTATTCCAAATCGCAAACCGc > 2:18/1‑251 (MQ=255) ttCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGA‑T‑T‑C‑CCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCt > 1:371309/1‑251 (MQ=255) aaGACAAAAAAAAGGCGACGAATACGTCGTCTTAAAAATCCGTTTGCCATCGCCGCCTTCTGCGTTGCTACAATGTATTAGA‑T‑T‑C‑CCC‑TCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGAAGCGCCCGTCTTCGGTCATCTCGACGTTCATGTCTGTCTCTGCTGCAGAGTCTTCAACGTATTCCATAGCGCAATCCGTTTCGCCg < 2:155785/250‑1 (MQ=255) aGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGA‑T‑T‑C‑CCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGATCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCTCAAACCGCTTCGCCg > 1:306529/1‑251 (MQ=255) aCAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGA‑T‑T‑C‑CCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGtt > 1:85112/1‑251 (MQ=255) aGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGA‑T‑T‑C‑CCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCTTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGATTCTTCCACGTATTCCAACTAGCAATCGCCTTCGCCGTTCACAATTcc > 2:312506/1‑251 (MQ=255) cGACTCATCAGTCGCCTTAACAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGA‑T‑T‑CACCC‑TCGCGCCAGAGCCAACAAGCTGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGTCGTTCACCATTCCGAc > 2:171951/1‑251 (MQ=255) cGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGA‑T‑T‑C‑CCC‑TCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGGGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGAcc > 1:228883/1‑250 (MQ=255) caGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGA‑T‑T‑C‑CCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTg < 1:169026/251‑1 (MQ=255) accgcgttAAAAACCAGTTTGCCATCGCCGCCTTCTGCGTCGCTACAATGGATTCGA‑T‑T‑C‑CCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGGTCGCCGTCTGCCGGCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCACCACTGCGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCg < 1:157730/245‑1 (MQ=255) aGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGA‑T‑T‑C‑CCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTc < 1:18/251‑1 (MQ=255) ccAGCGCAGCCTTCTGCGTCGCTTAAATGGATGCGA‑T‑T‑C‑CCC‑TCGGGCCAGAGCCAACAATATGAGTAGCTCTTCATGGGTGATCGGCTCGCCTTCTGCCGTCCCCTGCACGTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGGGGCAGAGTCTTCAACGTATCCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGAt < 2:228883/251‑1 (MQ=255) ccgccTTCTGCGTCGCTACAATGGATTCGA‑T‑T‑C‑CCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGtt < 1:143012/251‑1 (MQ=255) cgccTTCTGCGTCGCTACAATGGATTCGA‑T‑T‑C‑CCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGttt > 1:291391/1‑251 (MQ=255) cTTCTGCGTCGCTACAATGGATTCGA‑T‑T‑C‑CCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAAGGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCGTCGCCGTGCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCgg < 1:153414/240‑1 (MQ=255) cTTCTGAGTCGCTACACTGGATTCGA‑T‑T‑C‑CCCCTCGGGCCAGCGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGGCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGGTCACAATTCCGACAGAAACCGCGGCTACCATCCCCTTCATTGGagatcggcagg > 2:153414/1‑241 (MQ=255) gCTACAATGGATTCGA‑T‑T‑C‑CCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGTGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGtt > 1:128385/1‑251 (MQ=255) aCAATTGATTCGT‑T‑T‑C‑CCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTTGTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCTACAGAAACTGCGGCTACCATCCCTTTCTTCGGATTGGTTTTCAGCTTGCCGtttt < 1:44369/250‑1 (MQ=255) aCAATGGATTCGA‑T‑T‑C‑CCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTc > 1:189938/1‑251 (MQ=255) ggATTCGA‑T‑T‑C‑CCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCAGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTccacc > 1:41819/1‑250 (MQ=255) attcga‑t‑t‑c‑CCCCTCGGGCCAGAGCCAACAAGATGAGGAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGACTTCAACGTATTCCAACTCGCAAACCGCTTCGCCGTTCCCAATTCCGTCAGAAACTGAGACTTCCATCCCTTTCATCGGTTTGGTTTTCAGCTTGCCGTTTTCCACCAGc > 2:63892/1‑251 (MQ=255) ttcc‑ccc‑TCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCCTCGGATTGGTTTTCCGCTTGCCGTTTTCCACCAGCtccttt > 2:360527/4‑246 (MQ=255) ccc‑TCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAgcg < 1:134490/251‑1 (MQ=255) | CGCCCGGTATTAAACAGCCCGGCGTTGAAGAAATAGGGGCTTTTGCGCCCGGATTTCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGA‑T‑T‑C‑CCC‑TCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCG > NC_000913/3815638‑3816131 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |