Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	288096	289391	1296	4 [3]	[3] 4	[yagH]–[argF]	[yagH],xynR,[argF]

GACACCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACG‑GCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGTGCACTTCCAGCAGAGCGCGGGGCTGACCTGCTACTACAACAGCAAAAACTGGAGCTACTGCTTTGTGGACTACGAGGAGGGACAGGGTAGAACCATCAAAGTTATCCAGCTCGACCACAACGTGCCGTCGTGGCCGCTGCACGAGCAGCCCATTCCGGTGCCGGAACATGCGGAGAGCGTCTGGCTGCGGGTGGACGTGGATACGCTGGTCTACCGCTACAGCTACTCGTTTGATGGCGAGACGTGGCACACCGTGCCGGTGACGTATGAGGCGTGGAAGCTGTCGGACGACTACATCGGCGGGCGCGGCTTCTTCACCGGCGCGTTTGT  >  NC_000913/287845‑288323                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                     gactcccgctgctcgctcACCGCGCGGCCGCGCTGCTTCCGCGCT‑GAGGGCAACGACGCGCTCGATTCGCCCTTCACCCAACCGTCCGTGGCGGTCCGCTGGCAGCACTTCGCCTTCAGGGCAGAAACGCGGAGGGAGTTCTCGCCGGTGCACTTCCAGCAGAGGGTGGGGCTGACCTGCTACTACAACAGCAAAAACTGGAGCTACTGCTTTGTGGACTTCGAGGAGGGACAGGGTAGAACCATGAAAGt                                                                                                                                                                                                                                      <  2:129910/241‑1 (MQ=255)                                                                                                ggcgcgggcagcctttCGCCGTCCGGGCAGAAGCGCGGATGGAGGTCTCGCCGGGGCCCTTCCAGCAGAGCGCGGGGCTGACCGGCGACTACAACAGCAAAAACTGGAGCTACTGCTTTGTGGACTTCGAGGAGGGACAGGGTAGAACCATCAAAGTTATCCAGCTCGACCACAACGGGCCGTCGTGGCCGCTGCACGAGCAGCTCATTCCGGTGCCGGAACATGCGTAGAGCGTCTGGCTGCGGGTGGAc                                                                                                                                        <  2:115563/237‑1 (MQ=255)                                                                                                                              aaaCGCGGATGGAGTTCGCGCCGGTGCACTTCCAGCAGAGTGCGGGGCTGACCTGCTACTACAACAGCAAAAACTGGAGCTACTGCTTTGTGGACTACGAGGAGGGACAGGGTAGAACCTTCAAAGTTATCCAGCTCGACCACAACGTGCCGTCGTGGCCGCTGCACGAGCAGACCATTCCGGTGCCGGAACATGCGGAGAGCGTCTGGCTGCGGGTGGACGTGGATACGCTGGTCTACCGCTACAGCTAc                                                                                                          <  2:109947/251‑1 (MQ=255)                                                                                                                                                                                                                                      ggACAGGGTAGAACCATCAAAGTTATCCAGCTCGACCACAACGTGCCGTCGTGGCCGCTGCACGAGCAGCCCATTCCGGTGCCGGAACATGCGGAGAGCGTCTGGCTGCGGGTGGACGTGGATACGCTGGTCTATCGCTACAGCTACTCGTTTGATGGCGAGACGTGGCACACCGTGCCGGTGACGCATGAGGCGTGGAAGCTGTCGGACGACTACATCGGCGGGCGCGGGTTCTTTACACGCGCGtttct  >  1:181712/1‑249 (MQ=255)                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                     GACACCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACG‑GCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGTGCACTTCCAGCAGAGCGCGGGGCTGACCTGCTACTACAACAGCAAAAACTGGAGCTACTGCTTTGTGGACTACGAGGAGGGACAGGGTAGAACCATCAAAGTTATCCAGCTCGACCACAACGTGCCGTCGTGGCCGCTGCACGAGCAGCCCATTCCGGTGCCGGAACATGCGGAGAGCGTCTGGCTGCGGGTGGACGTGGATACGCTGGTCTACCGCTACAGCTACTCGTTTGATGGCGAGACGTGGCACACCGTGCCGGTGACGTATGAGGCGTGGAAGCTGTCGGACGACTACATCGGCGGGCGCGGCTTCTTCACCGGCGCGTTTGT  >  NC_000913/287845‑288323

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑