New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 275508	0 (0.000)	13 (0.460)	13/468	0.8	100%	coding (184/1404 nt)	mmuP	S‑methyl‑L‑methionine transporter
	?	NC_000913	372749 =	0 (0.000)					coding (635/810 nt)	mhpD	2‑hydroxypentadienoate hydratase

ATGGGTACTTCCGGCGCTGGAAGTGGTGGGGAGCCGCATTCGCGACTGGTCGATTCAGTTTGTCGATACCGTGGCAGATAACGCCTCCTGTGGGGTGTATGTCATCGGCGGTCCGGCGCAACGTCCGGCGGGGTTAGACCTGAAAAACTGCGCCATGAAGATGACGCGTAATAACGAAGAGGTTTCTAGCGGGCGCGGCAGCGAATGCCTGGGACATCCGCTTAATGCGGCCGTCTGGCTGGCACGCAAAATGGCCAGTCTGGGT‑GAACCGCTGCGCACCGGAGATATC‑ATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATAGGTTCAGTTGCTGCGACATTTTCAAGCGCAGCCCCAAAAGGAAGTCTGTCATGAGTAAGCGTAAAGTCGCCATTATCGGTTCTGGCAACATTGGTACCGATCTGATGATTAAAATTTTGCGT  >  NC_000913/372507‑372992                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                      aacgcggtataacaaaccttctttggatttttagatgtccatacgtttagaaggttatatgcaaacaacacaacaaaatgcgccactgaagcgcacaatgaaaacgcgtcacctgattatgctttccttgggcggcgtgattggcacaggattattcttcaataccgggtacatcatttccaccactggagcgtcgggaacgctgctggcctatctgattggtgcgctggtggtctggctggCACGCaaaa                                                                                                                                                                                                                                               <  1:372180‑M2/9‑1 (MQ=255)    gcggtataacaaaccttctttggatgtttagatgtccatacgtttagaaggttatatgcaaacaacacaacaaaatgcgccactgaagcgcacaatgaaaacgcgtcacctgattatgctttccttgggcggcgtgattggcacaggattattcttcaataccgggtacatcatttccaccactggagcggcgggaacgctgctggcctatctgattggtgcgctggtggtctggctggCACGCAAAATgg                                                                                                                                                                                                                                            <  1:234039‑M2/12‑1 (MQ=255)                                                      gttatatgcaaacaacacaacaaaatgcgccactgaagcgcacaatgaaaacgcgtcacctgattatgctttccttgggcggcgtgattggcacaggattattcttcaataccgggtacatcatttccaccactggagcggcgggaacgctgctggcctatctgattggtgggctggggggctggcgggCACGCAAAAAGGGCAAGCTGGGT‑GGACCGCTGCGCACCGGAGATATT‑AATTTTACCGGGgcg                                                                                                                                                                                        >  1:78796‑M2/190‑250 (MQ=255)                                                          tatgcaaacaacacaacaaaatgcgccactgaagcgcacaatgaaaacgcgtcacctgattatgctttccttgggcggcgtgattggcacaggattattcttcaataccgggtacatcatttccaccactggagcggcgggaaagctgctggcctatctgtttggtgcgctggtgggctggctggCACGCAAAATGGCCAGTCTGGGT‑GAAACGCTGCGCCCCGGGGAAATCAATTTTTA‑CGGGGCAtt                                                                                                                                                                                      >  1:89935‑M2/186‑249 (MQ=255)                                                                             aatgcgccactgaagcgcacaatgaaaacgcgtcacctgattatgctttccttgggcggcgtgattggcacaggattattcttcaataccgggtacttcatttccaccactggagcggcgggaacgctgctggcctatctgattggtgcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGT‑GAACCGCTGCGCACCGGAGATATC‑ATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGaa                                                                                                                                                                 <  1:342115‑M2/85‑1 (MQ=255)                                                                                                    gaaaacgcgtcacctgattatgcttgccttgggcggcgtgattggcacaggattattcttcaataccgggtacatcatttccaccactggagcggcgggaacgctgctggcctatctgattggtgcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGT‑GAACCGCTGCGCACCGGAGATATC‑ATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGcc                                                                                                                                           <  1:265034‑M2/107‑1 (MQ=255)                                                                                                        acgcgtcacctgattatgctttccttgggcggcgtgattggcacaggattattcttcaataccgggtacatcatttccaccactggagcggcgggaacgctgcttgcctatctgattggggcgctggtgggctggctggGACGCAAAATGGCCAGTCTGGGTGGAACC‑CTGCGCACCGGGGATATC‑ATTCTTACCGGGGCCTTAGGTCCGATGGGGGCGGGGAATCCCGGCGCTCGTTTTGGAGcccaatt                                                                                                                                      >  1:373893‑M2/140‑248 (MQ=255)                                                                                                                       atgctttccgtgggcggcgtgattggcacaggattattcttcaataccgggcacatcatttccaccactggagcggcgggaacgctgctggcctatctgattggtgcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGT‑GAACCGCTGCGCACCGGAGATATC‑ATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATAGGTTc                                                                                                                       <  1:261574‑M2/127‑1 (MQ=255)                                                                                                                                                                                       ccactggagcggcgggaacgctgctggcctatctgattggtgcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGT‑GAACCGCTGCGCACCGGAGATATC‑ATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATAGGTTCAGTTGCTGCGACATTTTCAAGCGCAGCCCCAAAAGGAAGTCTGTCATGAGTAAGCGTAAAGTCg                                                       <  1:101071‑M2/191‑1 (MQ=255)                                                                                                                                                                                         actggagcggcgggaacgctgctggcctatctgattggtgcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGT‑GAACCGCTGCGCACCGGAGATATC‑ATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATAGGTTCAGTTGCTGCGACATTTTCAAGCGCAGCCCCAAAAGGAAGTCTGTCATGAGTAAGCGTAAAGTc                                                        <  1:53819‑M2/190‑1 (MQ=255)                                                                                                                                                                                                         cgctgctggcctatctgattggtgcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGT‑GAACCGCTGCGCACCGGAGATATC‑ATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATAGGTTCAGTTGCTGCGACATTTTCAAGCGCAGGCCCAAAAGGAAGTCGGTCATGAGTAAGCGTAAAGTCGCCATTAGCGGTTCTGGCa                                     <  1:341627‑M2/209‑1 (MQ=255)                                                                                                                                                                                                                                gcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGT‑GAACCGCTGCGCACCGGAGATATC‑ATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATAGGTTCAGTTGCTGCGACATTTTCAAGCGCAGCCCCAAAAGGAAGTCTGTCATGAGTAAGCGTAAAGTCGCCATTATCGGTTCTGGCAACATTGGTACCGATCTGATGAtt              <  1:147117‑M2/232‑1 (MQ=255)                                                                                                                                                                                                                                      gtggtctggcttgCACGCAAAATGGGCAGTCTGGGT‑TAACCGCTGCGCCCCGGAGATATC‑ATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATAGGTTCAGTTGCTGCGACATTTTCAAGCGCAGCCCCAAAAGGAAGTCTGTCATGAGTAAGCGTAAAGTCGCCATTATCGGTTCTGGCAACATTGGTACCGATCTGATGATTAAAAtt        <  1:157084‑M2/238‑1 (MQ=255)                                                                                                                                                                                                                                            tggctggcACGCAAAATGGCCAGTCTGGGT‑GAACCGCTGCGCACCGGAGATATC‑ATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATAGGTTCAGTTGCTGCGACATTTTCAAGCGCAGCCCCAAAAGGAAGTCTGTCATGAGTAAGCGTAAAGTCGCCATTATCGGTTCTGGCAACATTGGTACCGATCTGATGATTAAAATTTTGCGt  >  1:264930/1‑251 (MQ=255)                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                      ATGGGTACTTCCGGCGCTGGAAGTGGTGGGGAGCCGCATTCGCGACTGGTCGATTCAGTTTGTCGATACCGTGGCAGATAACGCCTCCTGTGGGGTGTATGTCATCGGCGGTCCGGCGCAACGTCCGGCGGGGTTAGACCTGAAAAACTGCGCCATGAAGATGACGCGTAATAACGAAGAGGTTTCTAGCGGGCGCGGCAGCGAATGCCTGGGACATCCGCTTAATGCGGCCGTCTGGCTGGCACGCAAAATGGCCAGTCTGGGT‑GAACCGCTGCGCACCGGAGATATC‑ATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATAGGTTCAGTTGCTGCGACATTTTCAAGCGCAGCCCCAAAAGGAAGTCTGTCATGAGTAAGCGTAAAGTCGCCATTATCGGTTCTGGCAACATTGGTACCGATCTGATGATTAAAATTTTGCGT  >  NC_000913/372507‑372992

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.