New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 275149	NA (NA)	25 (0.860)	24/488	0.2	100%	noncoding (1/1195 nt)	IS5	repeat region
	?	NC_000913	579184 =	0 (0.000)					coding (411/411 nt)	ybcV	DUF1398 domain‑containing protein YbcV

CAAACCCTAAACAATGAGTTGAAATTTCATATTGTTAATATTTATTAATGTATGCCAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAATTAAAAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCCTGTATTGCTGAAATGTGATTTCTCTTGATTTCAACCTATCATAGGACGTTTCTATAAGATGCGTATTTCTTGAGAATTTAACATTTACAACCTTTTTAA  >  NC_000913/578950‑579419                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                            gaaaatgacgcctgccattccctgcctgcgggtaaaatggctcgatgactttcaccatgttttgccatggcagaatcttctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgattactcatgatgcaccctgttctatggctccatatgacaaacatgatctcatatcagtgactggttcgctacttccTTAGCGTGGAAAGatta                                                                                                                                                                                                                             <  2:224291‑M2/17‑2 (MQ=255)   taaggtcgccggccattaccagccttggggtaaaacggctcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGGACAGATTtgt                                                                                                                                                                                                                           >  1:52544‑M2/233‑251 (MQ=255)                             ggggtaaaacggctcgattacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTaaa                                                                                                                                                                                                 <  1:196358‑M2/45‑1 (MQ=255)                                gtaaaacggctcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAg                                                                                                                                                                                              <  1:35421‑M2/48‑1 (MQ=255)                                       ggctcgatgactgccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGaa                                                                                                                                                                                       <  1:155818‑M2/55‑1 (MQ=255)                                           cgatgacttcccccatgtttttctattgcataatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaaatcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTATTGAATTAt                                                                                                                                                                                   <  2:296242‑M2/59‑1 (MQ=255)                                                      accatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAg                                                                                                                                                                        <  1:111056‑M2/70‑1 (MQ=255)                                                                gccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCttt                                                                                                                                                              >  1:364917‑M2/172‑251 (MQ=255)                                                                    tggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTatt                                                                                                                                                          >  1:165906‑M2/168‑250 (MQ=255)                                                                      gcagaatctgctccattcgggacaagaaaatctgttttctggtctgacggcgcttactgctgaattcactgtcgtcgaaggtaagttgatgactcatgattaaccctgttctatggctccagatgacaaacattatctcatatcagggacttgttcgcaccttccTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATAGCTTTTATGtt                                                                                                                                                        <  1:358027‑M2/86‑1 (MQ=255)                                                                               gctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTgg                                                                                                                                                   <  1:271909‑M2/91‑1 (MQ=255)                                                                                        gggtcaagaaaatctctttttgggtctgacggcgcttactgctgaattcactttcggcgaaggtaagttgatgactcatgatgatccctgtgctatgtctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAAGGCTCTCATTAAATAGGAATTAATTATCAAAGGTATAGTAATATTTTTTATGTTCGTGGATATTTGTAATcc                                                                                                                                      <  2:52544‑M2/104‑1 (MQ=255)                                                                                                                     cggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAGAttt                                                                                                         <  1:114647‑M2/133‑1 (MQ=255)                                                                                                                      ggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAGAtttt                                                                                                        <  1:106024‑M2/134‑1 (MQ=255)                                                                                                                         gcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAGATTTTccc                                                                                                     >  1:18616‑M2/115‑251 (MQ=255)                                                                                                                              ctgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCCTGTAt                                                                                                >  1:90873‑M2/110‑251 (MQ=255)                                                                                                                                            gtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGGAAAGATTTGTGTAGTGTTCCGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCCTGTATTGCTGAAATGTGAt                                                                                  <  1:657‑M2/156‑1 (MQ=255)                                                                                                                                            gtcggcgaaggaaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggccttgttcgcaccttccTTAGCGTGGAAAGATTTGTGTAGTGTTCTGACTGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATATTTTATGTTCGTGGATATTTGTAATCCATCGTAAAACTCATGCTTTAGCAAGATTTTCCCTGTATTGCTGAATTGTGAt                                                                                  >  2:3158‑M2/96‑251 (MQ=255)                                                                                                                                                                               ctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCATGCTTTAGCAAGATTTTCCCTGTATTGCTGAAATGTGATTTCTCTTGATTTCAACCTATCATAGGTAGTTTCt                                                >  1:187061‑M2/61‑250 (MQ=255)                                                                                                                                                                                             cagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGGCAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGCATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCCTGTATTGCTGAAATGTGATTTCTCTTGATTTCAACCTATCATAGGACGTTTCTATAAGATGCGTAttt                                 >  1:380401‑M2/47‑251 (MQ=255)                                                                                                                                                                                                      aacatgatctcttatcagggacttttgcgcaccttccTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCCTGTATTGCTGAAATGTGATTTCTCTTGATTTCAACCTATCATAGGACGTTTCTATAAGATTCGTATTTCTTGATAAt                        <  1:283759‑M2/214‑1 (MQ=255)                                                                                                                                                                                                       acatgatctcatatcagggacttgttcgcaccttccTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCCTGTATTGCTGAAATGTGATTTCTCTTGATTTCAACCTATCATAGGACGTTTCTATAAGATGCGTATTTCTTGAGAAtt                       <  1:79414‑M2/215‑1 (MQ=255)                                                                                                                                                                                                                catatcagggacttgttcgcaccttccTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCGTTAGCAAGATTTTCCCTGTATTGCTGAAATGTGATTTCTCTTGATTTCAACCTATCATAGGACGTTTCTATAAGATGCGTATTTCTTGAGAATTTATCAttt               <  1:308050‑M2/223‑1 (MQ=255)                                                                                                                                                                                                                   atcagggacttgttcgcaccttccTTAGCGTGGCAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTACTGCTTTAGCAAGATTTTCCCTGTATTGCTGAAATGTGATTTCTCTTGATTTCAACCTATCATAGGACGTTTCTATAAGATGCGTATTTCTTGAGAATTTAACATTTACa            >  2:166346‑M2/25‑250 (MQ=255)                                                                                                                                                                                                                             ggttcgcaccttccTTAGCGTGGAAAGATTTGAGTATTGTTCTGAATGCTCTCAGGAAATAGTAAGTAATTATCAAAGGTATAGTAAGTTCTTTTATTTTCGTGGATATTTGTAATCCATCGGAAAACTCCTTCTTTAGCAAGATTTTCCCTGTATTGCTGAAATGTGATTTCTTTTGATTTCAACCTATCATAGGACGGTTCTATAAGATGCGTATTTCTTGAGAATTTAACATTTACAACTTTTTTaa  <  2:148733‑M2/236‑1 (MQ=255)                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                            CAAACCCTAAACAATGAGTTGAAATTTCATATTGTTAATATTTATTAATGTATGCCAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAATTAAAAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCCTGTATTGCTGAAATGTGATTTCTCTTGATTTCAACCTATCATAGGACGTTTCTATAAGATGCGTATTTCTTGAGAATTTAACATTTACAACCTTTTTAA  >  NC_000913/578950‑579419

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.