Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	2,238,374	IS1 (–) +9 bp	coding (908‑916/1521 nt)	mglA ←	D‑galactose/methyl‑galactoside ABC transporter ATP binding subunit

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2238374 =	1 (0.040)	37 (1.270)	35/488	0.1	97.3%	coding (916/1521 nt)	mglA	D‑galactose/methyl‑galactoside ABC transporter ATP binding subunit
	?	NC_000913	3583428 =	NA (NA)					noncoding (1/768 nt)	IS1	repeat region
*	?	NC_000913	= 2238382	1 (0.040)	13 (0.450)	12/488	1.0	92.6%	coding (908/1521 nt)	mglA	D‑galactose/methyl‑galactoside ABC transporter ATP binding subunit
	?	NC_000913	= 3584195	NA (NA)					noncoding (768/768 nt)	IS1	repeat region

GTCAGTGGATCGCCACCGAACCGCTGGCAGGACTGACGATGGACAAGATCATCGCCATGATGGTTGGGCGTTCTCTTAACCAGCGTTTCCCTGACAAAGAAAACAAACCGGGCGAAGTCATCCTCGAGGTACGTAACCTGACGTCACTGCGCCAGCCGTCGATTCGCGATGTCTCGTTTGATCTGCATAAAGGGGAGATCCTCGGTATTGCCGGTCTGGTGGGGGCGAAACGTACCGATATTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/2238616‑2238374 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGA‑TGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCACCAGAAAATCATTGATATGGCCATGAATGGCGTTG  >  NC_000913/3583428‑3583675                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GTCAGTGGATCGCCACCGAACCGCTGGCAGGACTGACGATGGACAAGATCATCGCCATGATGGTTGGGCGTTCTCTTAACCAGCGTTTCCCTGACAAAGAAAACAAACCGGGCGAAGTCATCCTCGAGGTACGTAACCTGACGTCACTGCGCCAGCCGTCGATTCGCGATGTCTCGTTTGATCTGCATAAAGGGGAGATCCTCGGTATTGCCGGTCTGGTGGGGGCGAAACGTACCGATATTGGGTGA‑TGC                                                                                                                                                                                                                                                  <  1:151969/251‑1            GCCACCGAACCGCTGGCAGGACTGACGATGGACAAGATCATCGCCATGATGGTTGGGCGTTCTCTTAACCAGCGTTTCCCTGACAAAGAAAACAAACCGGGCGAAGTCATCCTCGAGGTACGTAACCTGACGTCACTGCGCCAGCCGTCGATTCGCGATGTCTCGTTTGATCTGCATAAAGGGGAGATCCTCGGTATTGCCGGTCTGGTGGGGGCGAAACGTACCGATATTGGGTGA‑TGCTGCCAACTTAC                                                                                                                                                                                                                                       <  1:239385/251‑1                        CTGGCAGGACTGACGATGGACAAGCTCATCGCCATGATGGTTGGGCGTTCTCTTAACCAGCGTTTCCCTGACAAAGCAAACAAACCGGGCGCAGTCATCCTCGAGGTACGTAACCTGACGTCACTGCGCCAGCCGTCGATTCGCGATGTCTCGTTTGATCTGCATAAAGGGGCGATCCTCGGTATTGCCGTACTGTTGGGGGCGAAACGTACCGATATTGGGTGA‑TGCTGCCAACTTACTGATTTGGTGc                                                                                                                                                                                                                            >  2:191212/1‑249                                 CTGACGCTGAACAAGATCATCGCCATGATGGTTGGGCGTTCTCTTAACCAGCGTTTACCTGACAAAGAAAACAAACAGGGCGAAGTCATCCTCGAGGTACGTAACCTGACGTCACTGCGCCAGCCGTCGCTTCGCGCTGTCTCGTTTGATCTGCTTAAAGGGGAGATCCTCGGTATTGCCGGTTTGGTGGGGGCGAAACGTACCGCTATTGGG‑GAGTGCTGCCAACTTTCGGATTTGGTGTTTGATGGTGT                                                                                                                                                                                                                  >  2:171339/1‑251                                            CAAGATCATCGCCATGATGGTTGGGCGTTCTCTTAACCAGCGTTTCCCTGACAAAGAAAACAAACCGGGCGAAGTCATCCTCGAGGTACGTAACCTGACGTCACTGCGCCAGCCGTCGATTCGCGATGTCTCGTTTGATCTGCATAAAGGGGAGATCCTCGGTATTGCCGGTCTGGTGGGGGCGAAACGTACCGATATTGGGTGA‑TGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGC                                                                                                                                                                                                       >  1:187882/1‑251                                             AAGATCATCGCCATGATGGTTGGGCGTTCTCTTAAACAGCGTTTCCCTGACAAAGAAAACAAACCGGGCGAAGTCATCCTCGAGGTACGTAACCTGACGTCACTGCGCCAGCCGTCGCTTCGCGATGTCTCGTTTGATCTGCATAAAGGGGAGATCCTCGGTATTGCCGGTCTGGGAGGGGCGAAACGTCCCAATATTGGGGGC‑TGCTGCACACTTACTGTTTGAGTGTATGATGGTGTTTTTGAGGTGac                                                                                                                                                                                                      >  2:374719/1‑249                                               GATCATTGCCATGATGGTTGGGCGTTCTCTTAACCAGCTGTTCCCTGGCAAAGAAAACAAACCTGGCGAAGTCATCCTCGAGGTACGTTACCTGACGTCACTGCGCCAGCCGTCGATTCGCGATGTCTCGTTTGATCTGCATAAAGGGGAGATCCTCGGTATTTCCGGTCTGGTGGGGGCGAAACGTACCGATATTGGGTGA‑TGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCC                                                                                                                                                                                                    <  2:233131/251‑1                                               GATCATCGCCATGATGGTTGGGCGTTCTCTTAACCAGCGTTTCCCTGACAAAGAAAACAAACCGGGCGAAGTCATCCTCGAGGTACGTAACCTGACGTCACTGCGCCAGCCGTCGATTCGCGATGTCTCGTTTGATCTGCATAAAGGGGAGATCCTCGGTATTGCCGGTCTGGTGGGGGCGAAACGTACCGATATTGGGTGA‑TGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCC                                                                                                                                                                                                    <  1:171339/251‑1                                                        CATGATGGTTGGGCGTTCTCTTAACCAGCGTTTCCCTGACAAAGAAAACAAACCGGGCGACGTCATCCTCGAGGTACGTAACCTGACGTCACTGCGCCAGCCGTCGATTCGCGATGTCTCGTTTGCTCTGCATACAGGGGAGATCCTCGGTATTGCCGGACTGGTGGGGGCGAAACGTACCGATATTGGGTGA‑TGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTC                                                                                                                                                                                           >  1:280778/1‑251                                                               GTTGGGCGTTCTCTTAACCAGCGTTTCCCTGACAAAGAAAACAAACCGGGCGAAATCATCCTCGAGGTACGTAACCTGACGTCACTGCGCCAGCCGTCGATTCGCGATGTCTCGTTTGATCTGCATAAAGGGGCGATCCTCGGTATTGCCGGTCTGGTGGGGGCGAAACGTACCGAGATTGGGTGC‑TGCTGCCAACTTACTGCTTTAGTGTATGATGGTGTTTTTTAGGTGCTCCAGTGGCTTCTGTTTCT                                                                                                                                                                                    >  2:384467/1‑251                                                                               ACCAGCGTTTCCCTGACAAAGAAAACAAACCGGGCGAAGGCAGCCTCGAGGTACGTTACCTGACGTCACTGCGCCAGCCGTCGATTCGCGATGTCTCGTTTGATCTGCATAAAGGGGAGATCCTCGGTATTGCCGGTCTGGTGGGGGCGAAACGTACCGATATTGGGTGA‑TGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCT                                                                                                                                                                    <  2:99790/251‑1                                                                                            TGACAAAGAAAACAAACCGGGCGAAGTCATCCTCGAGGTACGTAACCTGACGTCACTGCGCCAGCCGTCGATTCGCGATGTCTCGTTTGATCTGCATAAAGGGGAGATCCTCGGTATTGCCGGTCTGGTGGGGGCGAAACGTACCGATATTGGGTGA‑TGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTG                                                                                                                                                                                                        >  1:289186/1‑202                                                                                                              gggcggtGTCATCCCCGAGGTACGTAACCTTACGTCACTGCGCCAGCCGTCGCTTCGCGATGTCTCGTTTGATCGGCATAAAGGGGAGAGCCTCGGTATTGCCGGTCTGGTGGTGGCGAAACGTACCGATATTGGGTGA‑TGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGG                                                                                                                                     <  2:217004/244‑1                                                                                                                  GAAGTCATCCTCGAGGTACGTAACCTGACGTCACTGCGCCAGCCGTCGATTCGCGATGTCTCGTTTGATCTGCATAAAGGGGAGATCCTCGGTATTGCCGGTCTGGTGGGGGCGAAACGTACCGATATTGGGTGA‑TGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTG                                                                                                                                                                                                        <  1:115633/180‑1                                                                                                                  GAAGTCATCCTCGAGGTACGTAACCTGACGTCACTGCGCCAGCCGTCGATTCGCGATGTCTCGTTTGATCTGCATAAAGGGGAGATCCTCGGTATTGCCGGTCTGGTGGGGGCGAAACGTACCGATATTGGGTGA‑TGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTG                                                                                                                                                                                                        >  2:115633/1‑180                                                                                                                            TCGAGGTACGTAACCTGACGTCACTGCGCCAGCCGTCGATTCGCGATGTCTCGTTTGATCTGCATAAAGGGGAGATCCTCGGTATTGCCGGTCTGGTGGGGGCGAAACGTACCGCTATTGGGTGA‑TGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCG                                                                                                                       >  1:53569/1‑251                                                                                                                               AGGTACGTAACCTGACGTAACTGCGCCAGCCGTCGACTAGCGCTGTCTAGATTGATCTGCATCAAGGGGAGATCCTCGGTATTGCCGGTCTGGTGGGGGCGAAACGTACCGATATTGGGTGA‑TGCTGCCACCTTACTGATTTAGTGTATGCTGGGGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCCAACGCACCGCCGcac                                                                                                                    >  2:334379/1‑248                                                                                                                                  tactTAACCTGACGTCACTGCGCCAGCCGTCGATTCGCGATGTCGCGTTTGATCTGCATAAAGGGGAGATCCTCGGTAGTGCCGGTCTGGTGGGGGCGAAACGTACCGATATTGGGTGA‑TGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCA                                                                                                                             <  2:126934/235‑1                                                                                                                                  TACGTAACCTGACGTCACTGCGCCAGCCGTCGATTCGCGATGTCTCGTTTGATCTGCATAAAGGGGAGATCCTCGGTATTGCCGGTCTGGTGGGGGCGAAACGTACCGATATTGGGTGA‑TGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCA                                                                                                                             >  1:126934/1‑239                                                                                                                                       AACCTGACGTCACTGCGCCAGCCGTCGATTCGCGATGTCTCGTTTGATCTGCATAAAGGGGAGATCCTCGGTATTGCCGGTCTGGTGGGGGCGAAACGTACCGATATTGGGTGA‑TGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCG                                                                                                             <  1:322042/250‑1                                                                                                                                         CCTGACGACACTGCGCCAGCCGTCGATTCTCGATGTCTCGTTTGCTCTGCATAAAGGGGAGATCCTCGGTATTGCCGGTCTGGTGGGGGCGAAACGTACCGATATTGGGCGA‑TGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCa                                                                                                           >  2:138207/1‑249                                                                                                                                               gtcactaaGCCAGCCGTCGATTCGCGCTGTCTCGTTTGATCTGCATCAAGGGGAGATCCTCGGAATTGCCGGTCTGGTGGGGGCGCAACGTACCGCTATTGCGTGA‑TGCTGCCAACTTACTGATTTAGAGTATGATGGTGTTTTTGAGGCGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTTCTGACGGGGTGGTGCGTAACGGCAAAAGCCCCGCCGGACAACAGCGCTATCTCTG                                                                                                    >  2:373826/9‑251                                                                                                                                                      CGCCAGCCGTCGATGCGCGATGTCTCGTTTGATCTGCATAAAGGGGAGATCCTCGGTATTGCCGGTCTGGTGGGGGCGAAACGTACCGATATTGGGTGA‑TGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTTCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCAC                                                                                             <  1:361241/251‑1                                                                                                                                                        CCAGCCGTCGATTCGCGATGTCTCGTTTGAACTGCATAACGCGGCGATCCTCGGTATTGCCGGTCTGGAGGGGGCGACACGTACCGATATTGGCTGA‑TGCTGACAACTTACTGATTTCGTGTATGATGGTGTTTTTGGAGTGCTCCAGTGGCTTCTGTTTCTGTCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGAAACGGCAAAAGCACCGCCGGACAACAGCGCTATCTCTGCTCACACTG                                                                                           >  1:349220/1‑251                                                                                                                                                          AGCCGTCGATTCGCGATGTCTCGTTTGATCTGCATAAAGGGGAGATCCTCGGTATTGCCGGTCTGGTGGGGGCGAAACGTACCGATATTGGGTGA‑TGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGC                                                                                                                              >  1:299702/1‑214                                                                                                                                                          AGCCGTCGAGTCGCGATGTCTCGTTTGATCTGCATAAAGGGGAGATCCTCGGTATTGCCGGTCTGGTGGGGGCGAAACGTACCGATATTGGGTGA‑TGCTGCCAACTTACTGATTTAGTGTATGATGGTGTGTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGAAAAAGC                                                                                                                              <  2:299702/214‑1                                                                                                                                                             CGTCGATTCGCGCTGTCTCGTTTGATCTGCATAAAGGGGAGATCCTCGGTATTGCCGGTCTGGTGGGGGCGAAACGTACCGATATTGGGTGA‑TGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGT                                                                                       >  1:125184/1‑250                                                                                                                                                                  ATTCGCGATGTCTCGTTTGATCTGCATAAAGGGGTGATCCTCGGTATTGCCGGTCTGGTGGGTGCGAAACGAACCGATATTGGGTGA‑TGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAATACCACCCCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAccc                                                                                 >  2:73548/1‑248                                                                                                                                                                        GATGTCTCGTTTGATCTGCATAAAGGGGAGATCCTCGGTATTGCCGGTCTGGTGGGGGCGAAACGTACCGATATTGGGTGA‑TGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCA                                                                            >  1:140802/1‑250                                                                                                                                                                                           ATAAAGGGGAGATCCTCGGTATTGCCGGTCTGGTGGGGGCGAAACGTACCGATATTGGGTGA‑TGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGAC                                                                                                                                                      >  2:333297/1‑157                                                                                                                                                                                           ATAAAGGGGAGATCCTCGGTATTGCCGGTCTGGTGGGGGCGAAACGTACCGATATTGGGTGA‑TGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGAC                                                                                                                                                      <  1:333297/157‑1                                                                                                                                                                                                    AGATCCTCGGTAGTGCCGGTCTGGTGGGGGCGAAACGTACCGAGATTGGGTGA‑TGTTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTGTCTATCAGCGGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCTGAACGGCAAAAGCACCGCCGGACATCAGCGCTACCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAAC                                               <  2:125184/251‑1                                                                                                                                                                                                        CCTCGGTATTGCCGGTCTGGTGGGGGCGAAACGTACCGATATTGGGTGA‑TGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCG                                            <  1:223811/250‑1                                                                                                                                                                                                           CGGTATGGCCGGTCGGGTGGGGGCGAAACGTACCGATATTGGGTGA‑TGCTGCCAACTTCCTGATTTAGTGTATGTTGGTGTTTTGGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTAC                                        <  1:238462/251‑1                                                                                                                                                                                                            GGTATTGCCTGTCTGGTGGGGGCGAAACGTACCGATATTGGGTGA‑TGCTGCCAACTTACTGATTTAGGGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTACAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCCCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACG                                       <  1:53385/251‑1                                                                                                                                                                                                                                          ACCGATATTGGGTGA‑TGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCACCAGAAAATCATTGATATGGCCATGAA          <  1:27443/250‑1                                                                                                                                                                                                                                                 TTGGGTGA‑TGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGGTCAGCTACTGCCGGGGTGGTGCGTAACGGCAAAAGCACCGCCGTACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACACGGCAACGGCAGTTCACTTTCACCGCTTCTCCACCCGGTACGCACCAGCCACTCATTGATATGCCCATGAATGACGTTG  >  2:288728/1‑251                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GTCAGTGGATCGCCACCGAACCGCTGGCAGGACTGACGATGGACAAGATCATCGCCATGATGGTTGGGCGTTCTCTTAACCAGCGTTTCCCTGACAAAGAAAACAAACCGGGCGAAGTCATCCTCGAGGTACGTAACCTGACGTCACTGCGCCAGCCGTCGATTCGCGATGTCTCGTTTGATCTGCATAAAGGGGAGATCCTCGGTATTGCCGGTCTGGTGGGGGCGAAACGTACCGATATTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/2238616‑2238374 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGA‑TGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCACCAGAAAATCATTGATATGGCCATGAATGGCGTTG  >  NC_000913/3583428‑3583675

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.