| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,639,764 | G→A | S181S (TCC→TCT) | arcA ← | DNA‑binding transcriptional dual regulator ArcA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,639,764 | 0 | G | A | 87.9% | 136.1 / 2.3 | 59 | S181S (TCC→TCT) | arcA | DNA‑binding transcriptional dual regulator ArcA |
| Reads supporting (aligned to +/- strand): ref base G (6/1); new base A (27/24); total (34/25) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.27e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TTGAAAAATAAAAACGGCGCTAAAAAGCGCCGTTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGACAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTG > NC_000913/4639533‑4640001 | ttGAAAAATAAAAACGGCGCTAAAAAGCGCCGTTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCACAGAAGCGATAACCTTCACCGTGGATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCCGTTCAGCACGAGACTGAATTTTGCCTgggg > 1:454547/1‑250 (MQ=255) tGAAAAATAAAAACGGCGCTAAAAAGCGCCGTTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCACAGAAGCGATAACCTTCACCGTGGATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGGGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCCGTTCAGCACGAGACTGAATTTTGCCTggggt > 1:321264/1‑249 (MQ=255) aaaaTAAAAACGGCGCTAAAAAGAGCCGTTTTTTTTGACGGTGGTAAAGCCGATTAATCTCCCAGATCACCACAGAAGCGATAACCTTCACCGTGGATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGCCGGTCATTTGCTTCAGCAGTTCAGCTCGAGACTGAATTTTGCCTGGGTTTTc < 2:458224/251‑1 (MQ=255) aaaaCGGCGCTAAAAAGCGCCGTTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCAAGATCACCACAGAAGCGCTAACCTTCACCGTGGATGGTGGCGATGATTTCAGGCGTATCCGGCGTAGATTCGAGATGTTTACGAATACGGCGGATACTCAAGTCTAAAGTACGGTCGTGTGGTTTCAGCTCACGGCCGGGCCTTTTTTTCCGCCGTTCAGCACGAGACTGAATTTTGCCTGGGGTTTCCCAGac > 2:214464/1‑250 (MQ=255) gcgcTAAAAAGCGCCGTTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCACAGAAGCGATAACCTTCACCGTGTATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAg < 1:428747/251‑1 (MQ=255) gcgcTAAAAAGCGCCGTTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCACAGAAGCGATAACCTTCACCGTGGATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGa > 1:437562/1‑249 (MQ=255) gcgcTAAAAAGCGCCGTTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCACAGAAGCGATAACCTTCACCGTGGATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAg < 2:25784/251‑1 (MQ=255) aaaaGCGCCGTTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCACAGAAGCGATAACCTTCACCGTGGATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGGGTGGTTTCAGCTCCCGGCCGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATggg > 1:45983/1‑250 (MQ=255) aaaGCGCCGTTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCACAGAAGCGATAACCTTCACCGTGGATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGgcg > 1:253364/1‑251 (MQ=255) gcCGTTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCACAGAAGCGATAACCTTCACCGTGGATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGaa < 1:350759/251‑1 (MQ=255) tttttGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCACAGTAGCGATAACCTTCAACGTGGATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGGCTACAGTACGGTCGTGTGGTTTCAGCTCACGGCCGGTCATTTTCTTCATCAGTTCAACACGAGACTGTATTTTGCCTGGGTTTTTCCAGAAGTGAAGACTTGG‑GCGGAACTCGCTg > 2:373147/1‑251 (MQ=255) tttttGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCACAGAAGCGATAACCTTCACCGTGGATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTg > 1:344047/1‑251 (MQ=255) ttttGACGGTGGTAAAGCCGATTAAACTTCCAGATCACCACATAAGCGAGAACCTTCACCGTGGATTGTGGCGATGATTGCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTGCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGAGGAACTCGCTg < 2:107003/250‑1 (MQ=255) gATTAATCTTCCAGATCAACACAGAAGCGTTAACCTTCACCGTGGATGGTGGCGATGGTTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATGGTCACGTCTACATTTATGTCGTGTGGGTTTATCTAACGGCAGGGCATTTTCTTTAGAAGTTCAGCACGGGAGTGGATTTTGCCTGGGTTTTCACAGATGTGAGT‑CATAGCGCGAAACtagcggacaggaagtttgcatataac > 2:55671/1‑226 (MQ=255) aTCTTCCAGATCACCACAGAAGCGATAACCTTCACCGTGGATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCAt > 1:365049/1‑251 (MQ=255) tCCAGATCACCACAGAAGCGATAACCTTCACCGTGGATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCCGTTCAGCACGAGACTGAATTTTGCCTGGGGTTTCACAGAAGTGAAG‑AATGGCGCGGGACTCGCTGcgcgaggttggaaaggcgtcgtgtagggg > 2:480796/1‑226 (MQ=255) tCCAGATCACCACAGAAGCGATAACCTTCACCGTGGATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGcgcg < 1:480796/226‑1 (MQ=255) ccAGATCCCCACAGTAGCGATATCCTTCACCGTGGATGGGGGCGATGATTTCCGGCGTATTCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGCCGGTCATTTTCGTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAgt < 2:13888/250‑2 (MQ=255) ccAGATCACCACAGAAGCGATAACCTTCACCGTGGATGGTGGCGATGATTTCCGACGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGCCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGCCGGTTATTTTCTTCAGCAGTTCAGCACGCGACTGCATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGCACTCGCTGCGCGGCAGCTTGTACTGCTCGCCACCAggg > 1:224873/1‑251 (MQ=255) acAGAAGCGATAACCTTCACCGTGGATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCaacg > 1:255342/2‑251 (MQ=255) cGATAACCTTCACCGTGGATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGAGACt > 1:77666/1‑154 (MQ=255) cGATAACCTTCACCGTGGATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGAGACt < 2:77666/154‑1 (MQ=255) gtggaTGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCCCGGCCGGGCATTTTCTTCAGCCGTTCCGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCCGCTTGTACTGCTCGCCATCAGGGCCGATCAACGGACGGCTggtgttggcccgtt > 2:41848/5‑238 (MQ=255) ggttggtggCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCTCGGCCGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTcc < 2:95570/248‑1 (MQ=255) agggtggCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATTTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCa < 2:396318/249‑1 (MQ=255) gtggCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAAcc < 2:255342/251‑1 (MQ=255) gtggCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAAcc > 1:265554/1‑251 (MQ=255) tggCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGCCGGGCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGAGGAACTCGCTGCGCGGCAGCTTGTAATGATCGCCATCAGGGCCGATCAAAGAAAGGCTGTTGATGTCCAGTTCCCAAcc > 1:413326/1‑250 (MQ=255) atgatTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGa > 1:77227/1‑250 (MQ=255) ccggcgtatccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAg < 2:158772/251‑1 (MQ=255) ggcgtatccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGCCGGGCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCCCAGAAGTGACA‑CATGGCGCGGAACTCGCTGCGCGGCCGCTTGTACTGCTCGCCCTCAGGGCCGATCAACGGACGGCTGTTTATGTCCAGTTCCCAACCATTTAACATTTAGCt > 2:141309/1‑251 (MQ=255) gtatccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTc > 1:213409/1‑251 (MQ=255) cgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGATCAGACCGGGACTGAATTTTGCCTGGGGTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCCTCAGGGCCGATCCACGAACGGCGGTGTATGTCCCGTTCCCAACCCTTGAACTTGTAGCTTTCCACGCtcc > 2:16055/1‑249 (MQ=255) cGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTACACGCTacgaaggtct > 1:17192/1‑245 (MQ=255) aTGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGGGGTTTGAGCTAACCGACGGTCATTTTCTTCAGCACTTCCGCAAGAGACTGAATTTTGCCTGGGTTTTAACAGAAGTGAAG‑CATGGCGCGGAAATCGCAGAGCGGCAGCTTGTACTGCTAGCCATCAGGGCCGATCAACGAACGGCTGTTGAGGTCCAGTTCCCAACAATTGGACTGGTAGATTTCAACACTACGCGGttctttgc > 1:470216/1‑248 (MQ=255) tACGAATACGGCGGATCGTCACGTCTTCAGTACGGTCGTGTGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGAc < 1:307759/250‑1 (MQ=255) aCGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGCTCaac > 1:166100/1‑178 (MQ=255) aCGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCaac < 2:166100/178‑1 (MQ=255) gAATACGGCGGATCGTCACGTCTCCAGTACGGTCGTGTGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTGCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTac < 2:260076/231‑1 (MQ=255) gAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTac > 1:260076/1‑231 (MQ=255) aCGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAAACCTTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGcctaccggtcacc > 2:100964/1‑239 (MQ=255) aCGGCGGATCGGCCTGTCTACAGGACGGGCGTGTGGTTTCAGCTCACGGCCGGTCATTTTCCTCAGCAGTTCAGCACGAGACTGAATGTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTGCAACGCTACGACGTTCTTCGCTGACAGTACCCa < 2:307787/251‑1 (MQ=255) cggcggATCGTAACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAg < 2:454547/251‑1 (MQ=255) ggATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTc < 1:202259/251‑1 (MQ=255) cGTCATGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGCCGTTCATTTTCTTCAGCATTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATg < 2:34198/250‑1 (MQ=255) tCTACAGTACGGTCGTGTGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGaa > 2:174989/1‑191 (MQ=255) tCTACAGTACGGTCGTGTGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGaa < 1:174989/191‑1 (MQ=255) gTACGGTCGTGTGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCACCGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGACAgc > 1:397247/1‑248 (MQ=255) cGGTCGTGTGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGACAGCAGGtt > 2:222959/1‑251 (MQ=255) cAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGACAGCAGGTTGCGTGCACGAATc < 2:45983/250‑1 (MQ=255) cTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CAt < 1:135118/75‑1 (MQ=255) cTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CAt > 2:135118/1‑75 (MQ=255) ggcaggTCATTTTATTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGAACTGCTCGCCATCAGGGCCGATCAACAAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTAAACGCTACGAAGTTCTTCGGTGACCGTACCCAGATTAATGGTCCGGGACAGCAGGTTGCGTGCACGAATCGTCCGTTc > 1:355555/5‑250 (MQ=255) cATTTTCTTCAACCGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCTCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCCACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGCTTCATGGTACGGGACAGACGGTTGCGAGCACGAATTGTCAATTCAcgcaggg > 2:71947/1‑247 (MQ=255) aTTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGACAGCAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGtt < 1:222959/251‑1 (MQ=255) cagcagTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGACAGCAGGTTGCGTGCACGAATCGTCAGTTCATGCGGGTTGAACGGtt < 2:77227/251‑1 (MQ=255) cagcagTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGACAGCAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGtt > 1:470228/1‑251 (MQ=255) gTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGACAGCAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTg < 2:42445/248‑1 (MQ=255) gTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGACAGCAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTg > 1:42445/1‑248 (MQ=255) | TTGAAAAATAAAAACGGCGCTAAAAAGCGCCGTTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGACAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTG > NC_000913/4639533‑4640001 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |