| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,639,719 | C→T | P196P (CCG→CCA) | arcA ← | DNA‑binding transcriptional dual regulator ArcA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,639,719 | 0 | C | T | 94.2% | 149.6 / ‑6.2 | 53 | P196P (CCG→CCA) | arcA | DNA‑binding transcriptional dual regulator ArcA |
| Reads supporting (aligned to +/- strand): ref base C (1/0); major base T (27/22); minor base G (3/0); total (31/22) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.53e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
CCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCGTTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGC‑CGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGACAGTAGGTT > NC_000913/4639484‑4639961 | ccAGTAAAGAAGTTACAATGGACGAGCAATTACGTATCTGGAAAGAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCGTTTTTTTTGACGTTGGTAAAGCCGATTAATCTTCCAGATCACCACAGAAGCGATAACCTTCACCGTTGATGGTGGCGATGATTGCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCTTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACgg < 1:193828/251‑1 (MQ=255) atcaattACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCGTTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCACAGAAGCGATAACCTTCACCGTGGATGGTGGCGATGATTTCCGGCGTATCCGGAGTAGATTCGAAATGTTTCCGAATACGGCGGATCGTCCCGTCTACAGTACGGTCGTGGGGTTTCAGCTCACGGCGCGG‑CCTTTTCTTCAGCCGTTc > 2:159024/6‑250 (MQ=255) gTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCGTTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCACAGAAGCGATAACCTTCACCGTGGATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATCCGGCGGATCGTAACGTATACAGGACGGGCGTGTGGGTTCAGCTAACGGC‑CGGTCAttttttttcgccgttaaacaagagac > 2:457157/1‑229 (MQ=255) ttGAAAAATAAAAACGGCGCTAAAAAGCGCCGTTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCACAGAAGCGATAACCTTCACCGTGGATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGC‑CGGTCATTTTCTTCAGCCGTTCAGCACGAGACTGAATTTTGCCTgggg > 1:454547/1‑250 (MQ=255) tGAAAAATAAAAACGGCGCTAAAAAGCGCCGTTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCACAGAAGCGATAACCTTCACCGTGGATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGGGGTTTCAGCTCACGGC‑CGGTCATTTTCTTCAGCCGTTCAGCACGAGACTGAATTTTGCCTggggt > 1:321264/1‑249 (MQ=255) aaaaTAAAAACGGCGCTAAAAAGAGCCGTTTTTTTTGACGGTGGTAAAGCCGATTAATCTCCCAGATCACCACAGAAGCGATAACCTTCACCGTGGATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGC‑CGGTCATTTGCTTCAGCAGTTCAGCTCGAGACTGAATTTTGCCTGGGTTTTc < 2:458224/251‑1 (MQ=255) aaaaCGGCGCTAAAAAGCGCCGTTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCAAGATCACCACAGAAGCGCTAACCTTCACCGTGGATGGTGGCGATGATTTCAGGCGTATCCGGCGTAGATTCGAGATGTTTACGAATACGGCGGATACTCAAGTCTAAAGTACGGTCGTGTGGTTTCAGCTCACGGC‑CGGGCCTTTTTTTCCGCCGTTCAGCACGAGACTGAATTTTGCCTGGGGTTTCCCAGac > 2:214464/1‑250 (MQ=255) gcgcTAAAAAGCGCCGTTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCACAGAAGCGATAACCTTCACCGTGTATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGC‑CGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAg < 1:428747/251‑1 (MQ=255) gcgcTAAAAAGCGCCGTTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCACAGAAGCGATAACCTTCACCGTGGATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGC‑CGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGa > 1:437562/1‑249 (MQ=255) gcgcTAAAAAGCGCCGTTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCACAGAAGCGATAACCTTCACCGTGGATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGC‑CGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAg < 2:25784/251‑1 (MQ=255) aaaaGCGCCGTTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCACAGAAGCGATAACCTTCACCGTGGATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGGGTGGTTTCAGCTCCCGGC‑CGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATggg > 1:45983/1‑250 (MQ=255) aaaGCGCCGTTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCACAGAAGCGATAACCTTCACCGTGGATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGC‑CGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGgcg > 1:253364/1‑251 (MQ=255) gcCGTTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCACAGAAGCGATAACCTTCACCGTGGATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGC‑CGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGaa < 1:350759/251‑1 (MQ=255) tttttGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCACAGTAGCGATAACCTTCAACGTGGATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGGCTACAGTACGGTCGTGTGGTTTCAGCTCACGGC‑CGGTCATTTTCTTCATCAGTTCAACACGAGACTGTATTTTGCCTGGGTTTTTCCAGAAGTGAAGACTTGG‑GCGGAACTCGCTg > 2:373147/1‑251 (MQ=255) tttttGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCACAGAAGCGATAACCTTCACCGTGGATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGC‑CGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTg > 1:344047/1‑251 (MQ=255) ttttGACGGTGGTAAAGCCGATTAAACTTCCAGATCACCACATAAGCGAGAACCTTCACCGTGGATTGTGGCGATGATTGCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGC‑CGGTCATTTTCTTCAGCAGTGCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGAGGAACTCGCTg < 2:107003/250‑1 (MQ=255) aCGGTGGTAAAGCCGATTAATCTTCCAGATCACCACAGAAGCGATAACCTTCACCGTGGATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGC‑CGGTCATTTTCTTCAGCAGTTCAGCACgaga < 1:413133/193‑4 (MQ=255) gATTAATCTTCCAGATCAACACAGAAGCGTTAACCTTCACCGTGGATGGTGGCGATGGTTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATGGTCACGTCTACATTTATGTCGTGTGGGTTTATCTAACGGC‑AGGGCATTTTCTTTAGAAGTTCAGCACGGGAGTGGATTTTGCCTGGGTTTTCACAGATGTGAGT‑CATAGCGCGAAACtagcggacaggaagtttgcatataac > 2:55671/1‑226 (MQ=255) aTCTTCCAGATCACCACAGAAGCGATAACCTTCACCGTGGATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGC‑CGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCAt > 1:365049/1‑251 (MQ=255) tCCAGATCACCACAGAAGCGATAACCTTCACCGTGGATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGC‑CGGTCATTTTCTTCAGCCGTTCAGCACGAGACTGAATTTTGCCTGGGGTTTCACAGAAGTGAAG‑AATGGCGCGGGACTCGCTGcgcgaggttggaaaggcgtcgtgtagggg > 2:480796/1‑226 (MQ=255) tCCAGATCACCACAGAAGCGATAACCTTCACCGTGGATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGC‑CGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGcgcg < 1:480796/226‑1 (MQ=255) ccAGATCCCCACAGTAGCGATATCCTTCACCGTGGATGGGGGCGATGATTTCCGGCGTATTCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGC‑CGGTCATTTTCGTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAgt < 2:13888/250‑2 (MQ=255) ccAGATCACCACAGAAGCGATAACCTTCACCGTGGATGGTGGCGATGATTTCCGACGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGCCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGC‑CGGTTATTTTCTTCAGCAGTTCAGCACGCGACTGCATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGCACTCGCTGCGCGGCAGCTTGTACTGCTCGCCACCAggg > 1:224873/1‑251 (MQ=255) acAGAAGCGATAACCTTCACCGTGGATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGC‑CGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCaacg > 1:255342/2‑251 (MQ=255) cGATAACCTTCACCGTGGATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGC‑CGGTCATTTTCTTCAGCAGTTCAGCACGAGACt < 2:77666/154‑1 (MQ=255) cGATAACCTTCACCGTGGATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGC‑CGGTCATTTTCTTCAGCAGTTCAGCACGAGACt > 1:77666/1‑154 (MQ=255) gtggaTGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCCCGGC‑CGGGCATTTTCTTCAGCCGTTCCGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCCGCTTGTACTGCTCGCCATCAGGGCCGATCAACGGACGGCTggtgttggcccgtt > 2:41848/5‑238 (MQ=255) ggttggtggCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCTCGGC‑CGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTcc < 2:95570/248‑1 (MQ=255) agggtggCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATTTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGC‑CGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCa < 2:396318/249‑1 (MQ=255) gtggCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGC‑CGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAAcc > 1:265554/1‑251 (MQ=255) gtggCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGC‑CGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAAcc < 2:255342/251‑1 (MQ=255) tggCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGC‑CGGGCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGAGGAACTCGCTGCGCGGCAGCTTGTAATGATCGCCATCAGGGCCGATCAAAGAAAGGCTGTTGATGTCCAGTTCCCAAcc > 1:413326/1‑250 (MQ=255) atgatTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGC‑CGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGa > 1:77227/1‑250 (MQ=255) ccggcgtatccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGC‑CGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAg < 2:158772/251‑1 (MQ=255) ggcgtatccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGC‑CGGGCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCCCAGAAGTGACA‑CATGGCGCGGAACTCGCTGCGCGGCCGCTTGTACTGCTCGCCCTCAGGGCCGATCAACGGACGGCTGTTTATGTCCAGTTCCCAACCATTTAACATTTAGCt > 2:141309/1‑251 (MQ=255) gtatccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGC‑CGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTc > 1:213409/1‑251 (MQ=255) cgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGC‑CGGTCATTTTCTTCAGCAGATCAGACCGGGACTGAATTTTGCCTGGGGTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCCTCAGGGCCGATCCACGAACGGCGGTGTATGTCCCGTTCCCAACCCTTGAACTTGTAGCTTTCCACGCtcc > 2:16055/1‑249 (MQ=255) cGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGC‑CGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTACACGCTacgaaggtct > 1:17192/1‑245 (MQ=255) aTGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGGGGTTTGAGCTAACCGA‑CGGTCATTTTCTTCAGCACTTCCGCAAGAGACTGAATTTTGCCTGGGTTTTAACAGAAGTGAAG‑CATGGCGCGGAAATCGCAGAGCGGCAGCTTGTACTGCTAGCCATCAGGGCCGATCAACGAACGGCTGTTGAGGTCCAGTTCCCAACAATTGGACTGGTAGATTTCAACACTACGCGGttctttgc > 1:470216/1‑248 (MQ=255) tACGAATACGGCGGATCGTCACGTCTTCAGTACGGTCGTGTGGTTTCAGCTCACGGC‑CGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGAc < 1:307759/250‑1 (MQ=255) aCGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGC‑CGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGCTCaac > 1:166100/1‑178 (MQ=255) aCGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGC‑CGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCaac < 2:166100/178‑1 (MQ=255) gAATACGGCGGATCGTCACGTCTCCAGTACGGTCGTGTGGTTTCAGCTCACGGC‑CGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTGCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTac < 2:260076/231‑1 (MQ=255) gAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGC‑CGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTac > 1:260076/1‑231 (MQ=255) aCGGCGGATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGC‑CGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAAACCTTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGcctaccggtcacc > 2:100964/1‑239 (MQ=255) aCGGCGGATCGGCCTGTCTACAGGACGGGCGTGTGGTTTCAGCTCACGGC‑CGGTCATTTTCCTCAGCAGTTCAGCACGAGACTGAATGTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTGCAACGCTACGACGTTCTTCGCTGACAGTACCCa < 2:307787/251‑1 (MQ=255) cggcggATCGTAACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGC‑CGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAg < 2:454547/251‑1 (MQ=255) ggATCGTCACGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGC‑CGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTc < 1:202259/251‑1 (MQ=255) cGTCATGTCTACAGTACGGTCGTGTGGTTTCAGCTCACGGC‑CGTTCATTTTCTTCAGCATTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATg < 2:34198/250‑1 (MQ=255) tCTACAGTACGGTCGTGTGGTTTCAGCTCACGGC‑CGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGaa > 2:174989/1‑191 (MQ=255) tCTACAGTACGGTCGTGTGGTTTCAGCTCACGGC‑CGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGaa < 1:174989/191‑1 (MQ=255) gTACGGTCGTGTGGTTTCAGCTCACGGC‑CGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCACCGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGACAgc > 1:397247/1‑248 (MQ=255) cGGTCGTGTGGTTTCAGCTCACGGC‑CGGTCATTTTCTTCAGCAGTTCAGCACGAGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGACAGCAGGtt > 2:222959/1‑251 (MQ=255) | CCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCGTTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGC‑CGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAG‑CATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGACAGTAGGTT > NC_000913/4639484‑4639961 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |