Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,636,821	G→A	L42L (TTG→TTA)	creC →	sensory histidine kinase CreC

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,636,821	0	G	A	100.0%	187.4 / NA	60	L42L (TTG→TTA)	creC	sensory histidine kinase CreC
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (33/27);  total (33/27)

CGATCGCACCGTCGATACCCACATTAAAACGCTGCGTGCCAAGCTGCGCGCCATCAACCCCGATCTTTCACCGATTAATACTCATCGCGGCATGGGATATAGCCTGAGGGGCCTGTAATGCGTATCGGCATGCGGTTGTTGCTGGGCTATTTTTTACTGGTGGCGGTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGG‑AGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTG  >  NC_000913/4636579‑4637066                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                       cGATCGCACCGTTGATACCCACATTAAAACGTTGCGTGCCAAGCTGCGCGCCATCAACCCCGATCTTTCACCGATTAATACTCATCGCGGCATGGGATATAGCCTGAGGGGCCTGTAATGCGTATCGGCATGCGGTTGCTGCTGGGCTATTTTTTACTGGTGGCGGTGGCGGCCTGGTTCGTACTGGCTATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTAATCGatac                                                                                                                                                                                                                                                <  1:435350/251‑4 (MQ=255)  gATCGCACCGTTGATACCCACATTAAAACGTTGCGTGCCAAGCTGCGCGCCATCAACCCCGATCTTTCACCGATTAATACTCATCGCGGCATGGGATATAGCCTGAGGGGCCTGTAATGCGTATCGGCATGCGGTTGCTGCTGGGCTATTTTTTACTGGTGGCGGTGGCGGCCTGGTTCGTACTGGCTATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTAATCGATAcc                                                                                                                                                                                                                                               >  1:308405/1‑251 (MQ=255)     cGCACCGTTGATACCCACATTAAAACGTTGCGTGCCAAGCTGCGCGCCATCAACCCAGCTCTTTCACCGATTAATACTCATCGCGGCATGGGATATAGCCTGAGGGGCCTGTAATGCGTATCGGCATGCGGTTGCTGCTGGGCTATTTTTTCCTGGTGGCGGTGGCGGCCTGGTTCGTACTGGCTATTTTTGTCAAAGAAGTTAAACCGGGCGTGGGAAGAGCAACGGAGGGGGAGTTAATCGATACCGc                                                                                                                                                                                                                                             >  2:66488/1‑250 (MQ=255)       cACCGTTGATACCCACATTAAAACGTTGCGTGCCAAGCTGCGCGCCATCAACCCCGATCTTTCACCGATTAATACTCATCGCGGCATGGGATATAGCCTGAGGGGCCTGTAATGCGTATCGGCATGCGGTTGCTGCTGGGCTATTTTTTACTGGTGGCGGTGGCGGCCTGGTTCGGACTGGCTATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGAAGTTAATCGATACCGCAAc                                                                                                                                                                                                                                          >  1:130788/1‑251 (MQ=255)                           aaaCGTTGCGTGCCAAGCTGCGCGCCATCAACCCCGATCTTTCACCGATTAATACTCATCGCGGCATGGGATATAGCCTGAGGGGCCTGTAATGCGTATCGGCATGCGGTTGCTGCTGGGCTATTTTTTACTGGTGGCGGTGGCGGCCTGGTTCGTACTGGCTATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGG‑Agactgccc                                                                                                                                                                                                                     >  1:84127/1‑244 (MQ=255)                           aaaCGTTGCGTGCCAAGCTGCGCGCCATCAACCCCGATCTTTCACCGATTAATACTCATCGCGGCATGGGATATAGCCTGAGGGGCCTGTAATGCGTATCGGCATGCGGTTGCTGCTGGGCTATTTTTTACTGGTGGCGGTGGCGGCCTGGTTCGTACTGGCTATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGG‑AGCTGgcgc                                                                                                                                                                                                                     >  1:475867/1‑251 (MQ=255)                            aaCGTTGCGTGCCAAGCTGCGCGCCATCAACCCCGAGCTTTCACCGATTAATACTCATCGCGGCATGGGATATAGCCTGAGGGGCCTGTAATGCGTATCGGCATGCGGTTGCTGCTGGGCTATTTTTTACTGGTGGCGGTGGCGGCCTGGTTCGTACTGGCTATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGG‑AGCTGGcgcg                                                                                                                                                                                                                    <  1:267636/251‑1 (MQ=255)                              cgttacGTGCCAAGCTGCGCGCCATCAACCCCGATCTTTCACCGATTAATACTCATCGCGGCATGGGATATAGCCTGAGGGGCCTGTAATGCGTATCGGCATGCGGTTGCTGCTGGGCTATTTTTTACTGGTGGCGGTGGCGGCCTGGGTCGTACTGGCTATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGGTAATCGATACCGCAACGTTGCTGGCGG‑AGCTGGcgcggc                                                                                                                                                                                                                  >  2:471028/6‑249 (MQ=255)                                   cGTGCCTAGCTGCGCGCCATCAACCCTGATCTTGCACCGATGAATACTCATCGCGGAAGGGGAGATAGCCTGAGGGGCCAGTAAAGCGTATCGGCATGCGGTTGCTGCTAGGCTATTTTCTACTGGTGGCGGTGGCGGCCTGGTTCGTACTGGCTATGTGTGTCAAAGAAGTTAAGCCGGGCTTGAGAAGAGCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGG‑AGCTGGCGCGTCCCGAt                                                                                                                                                                                                             <  2:372759/251‑1 (MQ=255)                                     tGCCAAGCTGCGCGCCATCAACCCCGATCTTTCACCGATTAATACTCATCGCGGCATGGGATATAGCCTGAGGGGCCTGTAATGCGTATCGGCATGCGGTTGCTGCTGGGCTATTTTTTACTGGTGGCGGTGGCGGCCTGGTTCGTACTGGCTATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGG‑AGCTGGCGCGTCCCGAttt                                                                                                                                                                                                           >  1:208109/1‑251 (MQ=255)                                       ccAAGCTGCGCGCCATCAACCCCGATCTTTCACCGATTAATACTCATCGCGGCATGGGATATAGCCTGCGGGGCCTGTAATGCGTATCGGCATGCGGTTGCTGCTGGGCTATTTTTTACTGGTGGCGGTGGCGGCCTGGTTCGTACTGGCTATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGGAGGGCAACGGAGGGGGCGTTAATCGATACCGCAAAGTTGCTGGCGG‑AGCAGGGGCGTCCCGCTTTgg                                                                                                                                                                                                         >  2:243336/1‑250 (MQ=255)                                                  gcCATCAACCCCGATCTTTCACCGATTAATACTCATCGCGGCATGGGATATAGCCTGAGGGGCCTGTAATGCGTATCGGCATGCGGTTGCTGCTGGGCTATTTTTTACTGGTGGCGGTGGCGGCCTGGTTCGTACTGGCTATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGG‑AGCTGGCGCGTCCCGATTTGCTCTCTGGGGAc                                                                                                                                                                                              >  1:347449/1‑251 (MQ=255)                                                     aTCAACCCCGATCTTTCACCGATTAATCCTCATCGCGGCATGGGATATAGACTGAGGGGCCTGTAATGCGTATCGGCATGCGGTTGCTGCTGGGCTATTTTTTACTGGTGGCGGTGGCGGCCTGGTTGGTACTGGCTATTTTTGTCAAAGAAGTTAAACCGGGCGGGCGAAAGGCAACGGGGGGGAAGTTAAGGGCTACGTCAACGTGGCTGGGGG‑AGTTGGTGCGTCCCGATTTGccgtcttggggccc                                                                                                                                                                                            >  1:186254/1‑237 (MQ=255)                                                     aTCAACCCCGATCTTTCACCGATTAATACTCATCGCGGCATGGGATATAGCCTGAGGGGCCTGTAATGCGTATCGGCATGCGGTTGCTGCTGGGCTATTTTTTACTGGTGGCGGTGGCGGCCTGGGTCGTACTGGCTTTTTTTGTCAAAGAAGTTAAACCGGGCGGGCGAAGAGCCACGGAGGGGATGTTAATCGATACCGCAACGTTGCTGGCGGGAG‑TGGCGCGTCCCGAttttgtccctgggggacc                                                                                                                                                                                            >  2:391755/1‑235 (MQ=255)                                                              gATCTTTCACCGATTAATACTCATCGCGGCATGGGATATAGCCTGAGGGGCCTGTAATGCGTATCGGAATGCGGTTGCTGCTGGGCTATTTTTTACTGGTGGCGGTGGCGGCCTGGTACGTACTGGCTATTTTTGTCAAAGAAGATAATCCGGGAGTGCGAAGAGCAAAGGAGGGGACGTTAATCGCTACCGCAAAGTTGCTGGCGG‑GACTGGCGCGTCCCGGTTTGCTCCCTGGGGAGCCAACgaccggg                                                                                                                                                                                  >  2:430263/1‑245 (MQ=255)                                                                            tAATACTCATCGCGGCATGGGATATAGCCTGAGGGGCCTGTAATGCGTATCGGCATGCGGTTGCTGCTGGGCTATTTTTTACTGGTGGCGGTGGCGGCCTGGTTCGTACTGGCTATTTTTGTCAAAGAAGTTAAACCGGGCGGGCGAAGAGCAACGGAGGGGACGTTAATCGCTACCGCCACGTTGCTGGCGG‑AGCTGGGGCGTGCCAGTTTGCTCTCTGGGGACCCACCCCCTGGGCAAcaggggcgggg                                                                                                                                                                    >  2:373982/1‑241 (MQ=255)                                                                                  tCATCGCGGCATGGGATATAGCCTGAGGGGCCTGTAATGCGTATCGGCATGCGGTTGCTGCTGGGCTATTTTTTACTGGTGGCGGTGGCGGCCTGGTTCGTACTGGCTATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGG‑AGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAAc                                                                                                                                                                                         >  1:411675/1‑224 (MQ=255)                                                                                  tCATCGCGGCATGGGATATAGCCTGAGGGGCCTGTAATGCGTATCGGCATGCGGTTGCTGCTGGGCTATTTTTTACTGGTGGCGGTGGCGGCCTGGTTCGTACTGGCTATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGG‑AGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAAc                                                                                                                                                                                         <  2:411675/224‑1 (MQ=255)                                                                                      ggcgGCATGGGATATAGGCTGAGGGGGCTGTAATGCGTATCGGCATGCGGGTGCTGCTGGGCTATTTTTGTCTGGTGGCGGTGGCGGCCTGGTTCGTAATGGCTATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGATGGGACGTTAAGCGATACCGCAACGTTGCTGGCGG‑AGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAg                                                                                                                                                          <  2:240606/250‑1 (MQ=255)                                                                                            aTGGGATATAGCCTGAGGGGCCTGTAATGCGTAGCGGCATGCGGTTGCTGCTGGGCTATTTTTTACTGGTGGCGGTGGCGGCCTGGTTCGTACTGGCTATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGG‑AGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTacaa                                                                                                                                                    <  1:335164/251‑1 (MQ=255)                                                                                              gggttataGCCTGAGGGGCCTGTAATGCGTATCGGCATGCGGTTGCTGCTGGGCTATTTTTTACTGGTGGCGGTGGCGGCCTGGTTCGTACTGGCTATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGG‑AGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTacaac                                                                                                                                                   <  2:347449/246‑1 (MQ=255)                                                                                                gATATAGCCTGAGGGGCCTGTAATGCGTATCGGCATGCGGTTGCTGCTGGGCTATTTTTTACTGGTGGCGGTGGCGGCCTGGTTCGTACTGGCTATTTTTGTCAAAGAAGTTAAACCGTGCGTGCGAAGAGCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGG‑AGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATc                                                                                                                                                <  1:331702/251‑1 (MQ=255)                                                                                                 atatAGCCTGAGGGGCCTGTAATGCGTATCGGCATGCGGTTGCTGCTGGGCTATTTTTTACTGGTGGCGGTGGCGGCCTGGTTCGTACTGGCTATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGG‑GGCTGGCGCGTCCCGATTTGCTCTCTGGGGGCCCAACGCCTGGGCAACTGGCGCAGGAGTTTAATCAACTAAAACATCg                                                                                                                                               >  1:164500/1‑251 (MQ=255)                                                                                                  tataGCCTGAGGGGCCTGTAATGCGTATCGGCATGCGGTTGCTGCTGGGCTATTTTTTACTGGTGGCGGTGGCGGCCTGGTTCGTACTGGCTATTTTTGTCAAAGGAGTTAAACCGGGCGGGCGAAGAGCAACGGAGGGGACGTTAATCGATACCGCCAAGTTGCTGGCGG‑AGCTGGCGCGTCCCGCTTTGCTCTCTGGGGACCCAACCCATGGGGCACAGGCGCAGGCGTTTAATACGCTACAACATCGc                                                                                                                                              >  2:8785/1‑251 (MQ=255)                                                                                                          gAGGGGCCTGTAATGCGTATCGGCATGCGGTTGCTGCTGGGCTATTTTTTACTGGTGGCGGTGGCGGCCTGGTTCGTCCTGGCTATTTTTGTCCAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGATAATCGATACCGCAACGTTGCTGGCGG‑CGCCGGCGCGGCCCGAGTTGCTCTCTGGGGACCCAAACCATGGGCAACTGGCCCAGGCGGTTAATCCGCTTCAACAACGCCCGtttgc                                                                                                                                      >  2:209857/1‑249 (MQ=255)                                                                                                          gAGGGGCCTGTAATGCGTATCGGCATGCGGTTGCTGCTGGGCTATTTTTTACTGGTGGCGGTGGCGGCCTGGTTCGTACTGGCTATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGG‑AGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTc                                                                                                                                       <  1:180867/250‑1 (MQ=255)                                                                                                                     aaTGCGTATCGGCATGCGGGTGCTGCTGGGCTATTTTTTACTGGTGGCGGTTGCGGCCTGGTTCGTACTGGCTATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTAATCGATACCGCAACGTGGCTGGCGG‑AGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCg                                                                                                                           <  1:66488/251‑1 (MQ=255)                                                                                                                                     cGGTTGCTGCTGGGCTATTTTTTACTGGTGGCGGTGGCGGCCTGGTTCGTACTGGCTATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGTCGTTAATCGCTACCGCACCGTTGCTGGCGG‑GGCTGGCGCGTTCCGATTTTCTCTCTTGGGGCCCCACCCCTGGGCAAATGGCGCAGGCGTTTTATCCGCTACCACCTCGCCCGTTTCCCGCCAATTTCTGTGGcctttaacatat                                                                                                           >  2:51265/1‑240 (MQ=255)                                                                                                                                             gCTGGGCTATTTTTTACTGGTGGCGGTGGCGGCCTGGTTCGTACTGGCTATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGG‑AGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAAt                                                                                                    <  1:75592/250‑1 (MQ=255)                                                                                                                                                       tttttACGGGGGGCGGGGGCGGCCTGGTTCGTACTGGCTAGTTGTGTCAAAGAAGTTAACCCGGGCGTGCGAAGAGCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGG‑AGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATg                                                                                          <  2:263835/250‑1 (MQ=255)                                                                                                                                                                gtggcggtggcgGCCTGGTTCGTACTGGCTATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGG‑AGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGAc                                                                                <  1:219555/251‑1 (MQ=255)                                                                                                                                                                   gcggaggcGGCCTGGTTCGTACTGGCTATTTTTGTAAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGG‑AGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAACGTGCGCAATGAATATCATGTCTATATGACCg                                                                              >  1:407765/1‑250 (MQ=255)                                                                                                                                                                     ggtggcGGCCTTGTTCGTACTGGCTATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGGGCAACGGAGGGGACGTTAATCGATACCGCAACGTGGCTGGCGG‑AGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGTATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGAtt                                                                           <  2:262699/251‑2 (MQ=255)                                                                                                                                                                        ggcggCCTGGTTCGTACTGGCTATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGG‑AGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGAttcg                                                                         >  1:74134/5‑247 (MQ=255)                                                                                                                                                                        ggcggCCTGGTTCGTACTGGCTATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGG‑AGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGAttcg                                                                         <  1:352122/246‑4 (MQ=255)                                                                                                                                                                        ggcggCCTGGTTCGTACTGGCTAGTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGG‑AGCTGGCGCGTCCCGATTGGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGAttcg                                                                         <  2:74134/246‑4 (MQ=255)                                                                                                                                                                                 gTTCGTACTGGCTATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGG‑AGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAgggtaa                                                                 >  1:148411/1‑246 (MQ=255)                                                                                                                                                                                 gTTCGTACTGGCTATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGG‑AGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAg                                                               <  1:471028/251‑1 (MQ=255)                                                                                                                                                                                  ttCGTACTGGCTATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGG‑AGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCa                                                                       >  1:257080/1‑242 (MQ=255)                                                                                                                                                                                  ttCGTACTGGCTATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGG‑AGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCa                                                                       <  2:257080/242‑1 (MQ=255)                                                                                                                                                                                      tACTGGCTATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGG‑AGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCCATATCGGTGGCCTTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATTg                                                          >  2:212171/1‑251 (MQ=255)                                                                                                                                                                                       aCTGGCTATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGG‑AGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATTg                                                          <  1:366035/250‑1 (MQ=255)                                                                                                                                                                                          ggctaTTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGG‑AGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCAGGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTc                                                       <  2:308405/246‑1 (MQ=255)                                                                                                                                                                                                ttttGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGG‑AGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGc                                                                                                                                                                    <  1:317268/135‑1 (MQ=255)                                                                                                                                                                                                ttttGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGG‑AGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGc                                                                                                                                                                    >  2:317268/1‑135 (MQ=255)                                                                                                                                                                                                 tttGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGG‑AGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATAGCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCgg                                                <  1:381647/250‑1 (MQ=255)                                                                                                                                                                                                     tCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGG‑AGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAAt                                           >  1:147735/1‑251 (MQ=255)                                                                                                                                                                                                             gTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGG‑AGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTAGCAGGATAAATGATTGTTCGATTCGGCAAATAAAGCCgg                                   >  2:266547/1‑250 (MQ=255)                                                                                                                                                                                                               tAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGG‑AGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTg                                 >  1:215002/1‑251 (MQ=255)                                                                                                                                                                                                                         gTGCGAAGAGCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGG‑AGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGAAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGatt                        >  2:379059/1‑250 (MQ=255)                                                                                                                                                                                                                           gCGAAGAGCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGG‑AGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGTCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGattatt                     <  1:96511/251‑1 (MQ=255)                                                                                                                                                                                                                             gAAGAGCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGG‑AGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACAGCGCCCGTTTCGCGCCAATATCGGAGGCCATAACAAAGTGAGCAATGAATATCCTGTATATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTAGGCAAATAAAGCCGTTGGGCCGGATTATTcg                   >  2:268461/1‑251 (MQ=255)                                                                                                                                                                                                                              aaGAGCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGG‑AGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTcgc                  >  1:280453/1‑251 (MQ=255)                                                                                                                                                                                                                               agagCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGG‑CGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACCTCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGAGCGCAATg                                                                                                   >  2:125074/1‑169 (MQ=255)                                                                                                                                                                                                                               agagCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGG‑AGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATg                                                                                                   <  1:125074/169‑1 (MQ=255)                                                                                                                                                                                                                                  gCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGG‑AGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTg              >  1:427218/1‑251 (MQ=255)                                                                                                                                                                                                                                      cGGAGGGGACGTTAATCGATACCGTAACGTTGCTGGCGG‑AGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCTATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAAt          <  1:402081/251‑1 (MQ=255)                                                                                                                                                                                                                                       ggAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGG‑AGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATg         <  1:218393/251‑1 (MQ=255)                                                                                                                                                                                                                                         aGGGGACGTTAATCGATACCGCAACGTTGCTGGCGG‑AGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGAc       >  1:67298/1‑251 (MQ=255)                                                                                                                                                                                                                                              gcGTTAATCGAAACCGCAACGTTTCGAGCGG‑GGCTTGCGCGTCCCGATTGGCTCGCGGGTGACCCAACTCATGGGCAACCGGCGCAGGCTGTTAATCAGCTACAACATCGGCCGTTTCGCCCCAATATCGGTGGCATGAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATTGTTCGACTCGGCAAATAAAGCCGTTGGGCAGGCGTATTCGCGCTGGAATGACGTCTg  <  2:155630/250‑1 (MQ=255)                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                       CGATCGCACCGTCGATACCCACATTAAAACGCTGCGTGCCAAGCTGCGCGCCATCAACCCCGATCTTTCACCGATTAATACTCATCGCGGCATGGGATATAGCCTGAGGGGCCTGTAATGCGTATCGGCATGCGGTTGTTGCTGGGCTATTTTTTACTGGTGGCGGTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGG‑AGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTG  >  NC_000913/4636579‑4637066

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑