| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,631,323 | A→T | T197T (ACA→ACT) | slt → | soluble lytic murein transglycosylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,631,323 | 0 | A | T | 98.3% | 193.2 / NA | 61 | T197T (ACA→ACT) | slt | soluble lytic murein transglycosylase |
| Reads supporting (aligned to +/- strand): ref base A (1/0); major base T (38/21); minor base C (0/1); total (39/22) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.67e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGTGGCTTGTTAGCCTTTAGCCCGGAAAAGCCCGGAACTACCGAAGCGCAATGTAATTACTACTATGCGAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAAGGGGCGAAAGAGCTGTGGCTAACCGGCAAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGCGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGC‑GTATCCGTCTGGCGATGAAAGCGGGTAACACAGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAAC‑TGGCGCGACCGATTTTACCCGTCAAATGGCGGCGGTGGCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAG > NC_000913/4631078‑4631563 | cGTGGCTTGTTAGCCTTTAGCCCGGAAAAGCCCGGAACTACCGAAGCGCAATGTAATTACTACTATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAAGGGGCGAAAGAGCTGTGGCTAACCGGCAAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGC‑GTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCt < 1:342286/251‑1 (MQ=255) tGTTAGCCTTTAGCCCGGAAAAGCCCGGAACTACCGAAGCGCAATGTAATTACTACTATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAAGGGGCGAAAGAGCTGTGGCTAACCGGCAAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGC‑GTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTaa < 1:117585/249‑1 (MQ=255) aGCCTTTAGCCCGGAAAAGCCCGGAACTACCGAAGCGCAATGTAATTACTACTATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAAGGGGCGAAAGAGCTGTGGCTAACCGGCAAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGC‑GTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGc < 1:311163/251‑1 (MQ=255) tAGCCCGTAAAAGCCCTGAACTACCGAAGCGCAATGTAATTACTTCTATGCAAAATGGTACACCGGGCAGAGTGAAGATGCCTGGCAAGGGGCGAAAGAGCTGTGGCTAACCGGCAAGAGCCAGCCTAACGCCTGTGACAAGTTATTAAGGGTCTGTCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGC‑GTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTggca < 2:206177/250‑1 (MQ=255) ccGGAAAAGCCCGGAACTACCGAAGCGCAATGTAATTACTACTATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAAGGGGCGAAAGAGCTGTGGCTAACCGGCAAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGC‑GTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTggcagggca < 1:173658/251‑1 (MQ=255) cccGGAACTACCGAAGCGCAATGTCATTACTACTATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAAGGGGCGAAAGAGCTGTGGCTAACCGGCAAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGAGCGTCAGGTAAACAAGATCCGCGGGCGTATTTAGAGC‑GAAACCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGGAAAAGAGCTGGCAGGGCAGAtgcctac > 2:345897/1‑249 (MQ=255) ggAACTACCGAAGCGCAATGTAATTACTACTATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAAGGGGCGAAAGAGCTGTGGCTAACCGGCAAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGC‑GTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCg > 1:193070/1‑250 (MQ=255) aCCGAAGCGCAATGTAATTACTACTATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAAGGGGCGAAAGAGCTGTGGCTAACCGGCAAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGC‑GTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTAcc < 1:473292/250‑1 (MQ=255) ccGAAGCGCAATGTAATTACTACTATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAAGGGGCGAAAGAGCTGTGGCTAACCGGCAAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGC‑GTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTAcc > 1:210673/1‑249 (MQ=255) aaTTACTACTATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAAGGGGCGAAAGAGCTGTGGCTAACCGGCAAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGC‑GTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGc > 1:102747/1‑251 (MQ=255) aTTACTACTATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAAGGGGCGAAAGAGCTGTGGCTAACCGGCAAGAGCCAGCCTAACGACTGTGACAAGATATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGC‑GTATCCGTCTGGCGATGAAAGCGGGAAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGATTCCTGCCGATTACCAGACTATCGCCTCGGc > 1:235606/1‑250 (MQ=255) actactATTCAAAATGGAAAACCGGGCAGAGTGAAGAAGCCTGGCAAGGGGCGAAAGAGGTGTGGCTAACCGGCAAGAGCCAGCCTAACGCCTGTGAAAAGTTATTTAGTGGCTGGCGTGCGTCAGGTAAACAAGATCCGCGGGCGTATGTAGAGC‑GTATCCGTCGGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTTCCAGACTATCGCCTCGGCAAt < 2:38623/250‑1 (MQ=255) ctactaTGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAAGGGGCGAAAGAGCTGTGGCTAACCGGCAAGAGCCAGCCTACAGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGC‑GTATCCGTCTGGCGATGAAAGCGGGTACCACTGGACTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACCATCGCCTCGGCAATc > 1:443669/1‑250 (MQ=255) tactaTGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAAGGGGCGAAAGAGCTGTGGCTAACCGGCAAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGC‑GTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCAt > 1:277638/1‑251 (MQ=255) tatgcaacctGGAACACCGGGCAGAGTGAAGAAGCCTGGCCAGGGGCGAAAGAGATGTGGCTAACCGGCAAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGC‑GTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCGGATGCCTGCCGATTACCAGACTTTCGCCTCGGCAAtactttt > 2:39711/10‑245 (MQ=255) taTGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAAGGGGCGAAAGAGCTGTGGCTAACCGGCAAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGC‑GTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTc > 1:465578/1‑251 (MQ=255) aaaaTGGAACACCGGGCAGAGTGAAGAAGCCTGGCAAGGGGCGAAAGAGCTGTGGCTAACCGGCAAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGC‑GTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCCATCATTTCCCTgg > 1:460553/2‑251 (MQ=255) gAACACCGGGCAGAGTGAAGAAGCCTGGCAAGGGGCGAAAGAGCTGTGGCTAACCGGCAAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGC‑GTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGaac > 1:366460/1‑250 (MQ=255) acacCGGGCAGAGTGAAGAAGCCTGGCAAGGGGCGAAAGAGCTGTGGCTAACCGGCAAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGC‑GTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGaacaac < 2:65185/251‑1 (MQ=255) cGGGCAGAGTGAAGAAGCCTGGCAAGGGGCGAAAGAGCTGTGGCTAACCGGCAAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGC‑GTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCt > 1:91169/1‑250 (MQ=255) gCAGAGTGAAGAAGCCTGGCAAGGGGCGAAAGAGCTGTGGCTAACCGGCAAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGC‑GTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAAt > 1:255012/1‑250 (MQ=255) cAGAGTGAAGAAGCCTGGCAAGGGGCGAAAGAGCTGTGGCTAACCGGCAAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGC‑GTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATAc > 1:280920/1‑251 (MQ=255) cAGAGTGAAGAAGCCTGGCAAGGGGCGAAAGAGCTGTGGCTAACCGGCAAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGC‑GTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATAc < 2:193070/251‑1 (MQ=255) gaagaaGCCTGGCAAGGGGCGAAAGAGCTGTGGCTAACCGGCAAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGC‑GTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGGACt > 2:164942/1‑251 (MQ=255) aagCCTGGCAAGGGGCGAAAGAGCTGTGGCTAACCGGCAAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGC‑GTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCa > 1:429267/1‑216 (MQ=255) aagCCTGGCAAGGGGCGAAAGAGCTGTGGCTAACCGGCAAGAGCCAGCCTAACGCCTGTGACAAGGTATTTAGTGTCTGGCGGGCGGCAGGTAAACAAGATCCGCTGGCGTATTTAGAGC‑GTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCa < 2:429267/216‑1 (MQ=255) ggggCGAAAGAGCTGTGGCTAACCGGCAAGAGCCAGCCTAACGCCGGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGC‑GTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTAc < 2:210673/251‑1 (MQ=255) gAAAGAGCTGTGGCTAACCGGCAAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGC‑GTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGCTGCCTGCCGATTACCAGACTATCGCCTCGGCAACCATTTCCCTGGAGAACAACCCTAATACGGTACTGACCTTCGAGCGaacaac > 2:315138/1‑249 (MQ=255) gAAAGAGCTGTGGCTAACCGGCAAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGC‑GTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAAC‑Tg < 1:25933/251‑1 (MQ=255) cggtgGCTAACCGGCAAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGC‑GTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAAC‑TGGCGCGAc < 2:277638/249‑1 (MQ=255) ggCTAACCGGCAGGAGCCAGCCAAACGCCTGTGACAAGTTATTTAGGGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTTGCGTATTTAGAGC‑GTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAAC‑GGTCGCTACCGAt < 2:460553/251‑1 (MQ=255) cTAACCGGCAAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGC‑GTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTCCTGACCTTCGCGCGTACAAC‑TGGCGCGCCCGAttt > 2:237990/1‑251 (MQ=255) ccagccTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGC‑GTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAAC‑TGGCGCGACCGATTTTACCCGTCAACTgg > 1:219526/1‑251 (MQ=255) cTAACGCCTGTGACCAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGC‑GTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGAAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCCCTGGCGAACAACCCTATTACGGCACTGACCTTCGCGCGTACAAC‑TGGCGCGACCGATTTTACCCGTCAAATGgcggcg > 1:366279/1‑251 (MQ=255) atAACGCCTGTGACCAGTTATTTAGTGTCAGGAGTGCGTCAGGTAACCAAGATCCGCTGGCGTATTTAGAGC‑GTATCCGTCTGGCGATGAAAGCGGGTAACAATGGCCTGGTAACAGTGATGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAAC‑TGGCGCGCCCGATTTTTCCCTTCAAATGgcggcg > 1:366284/2‑251 (MQ=255) tAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGC‑GTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAAC‑TGGCGCGACCGATTTTACCCGTCAAATGGcggcgg > 1:266288/1‑251 (MQ=255) aaCGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGC‑GTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAAC‑TGGCGCGACCGATTTTACCCGTCAAATGGcggcggg > 2:219009/1‑250 (MQ=255) aaCGCCTGTGACAAGTTATTTAGTGTCTGGCGGGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGC‑GTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAAC‑TGGCGCGACCGATTTTACCCGTCAAATGgcggcg < 2:428999/249‑1 (MQ=255) agCCTATGAAAAGTTATTTCGTGCCTGGGTTGCGTCAGGTAAACAAGATACGCTGGCGTTTTTAGAGC‑GTACCCGTCTGGCGATGCAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGACGCCTGACGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTCATAAGGTACTGACCTTCGCGCGT‑CAACACGGCGCGAACGGTTTTACCCGTCAAAAGGaggcggggg > 2:483482/2‑248 (MQ=255) ccTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGC‑GTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACCAC‑TGGCGCGACCGATTTTACCCGTCAAATGGCGGCGGTgggg > 2:349661/1‑249 (MQ=255) tttAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGC‑GTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAAC‑TGGCGCGACCGATTTTACCCGTCAAATGGCGGCGGTGGCGTTTGCCAGTGTGgc > 1:270997/1‑251 (MQ=255) agtgTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGC‑GTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCCATCATTTCCCTAGCGAACAACCCTAATAAGGTACTGACCTTCGCGCGGACAAC‑CGGCGCGACCGCTTTTCCCCGTCAAATGGCGGCGGTgggggttagccatgtggggcg > 2:154923/4‑232 (MQ=255) cTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGC‑GTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAAC‑TGGCGCGACCGCTTTTACCCGTCAAAAGGCGGCGGGGGCGTTTTCCAgtggggggccggagg > 2:360330/1‑239 (MQ=255) tgcgtCAGGTAAACAAGATCCGCTGGCGTATTTAGAGC‑GTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAAC‑TGGCGCGACCGATTTTACCCGTCAAATGGCGGCGGTGGCGTTTGCCCGTGTGGCGCGGCCGGATGCTg > 1:110600/1‑251 (MQ=255) cgtCAGGTAAACAAGATCCGCTGGCGTATTTAGAGC‑GTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAAC‑TGGCGCGACCGATTTTACCCGTCAAATGGCGGCGGTGGCGTTTGCCAGTGTGGCGCGGCAGGATGCTggg > 1:145708/1‑249 (MQ=255) cAGGTAAACAAGATCCGCTGGCGTATTTAGAGC‑GTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTCCTGACCTTCGCGCGTACAAC‑TGGCGCGACCGATTTTACCCGTCAAATGGCGGCGGTGGCGTTTGCCAGTGTGGCGCGGCAGGATGGTgagac > 2:214599/1‑249 (MQ=255) cAGGTAAACAAGATCCGCTGGCGTATTTAGAGC‑GTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCTCGTACAAC‑TGGCGCGACCGATTTTACCCGTCAAATGGCGGCGGTGGCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAAt < 1:353673/251‑1 (MQ=255) aaccaaacacggCTGGCGTATTTAGAGCTGT‑GCCGTCTGGCGACGAAAGCGGGTAACACTGGCCGGGTAACAGTGCCGGAAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCGATAATTTCACGGGCGAACAACCCGAATACGGTCCTGACCTTCGCGCGGACAAC‑TGGCGCGACCGATTTTACCCGTCAAATGGCGGCGGTGGCGTTTGCCATTGTGGTGCGGCAGGATGCTGAGGATGCAc < 2:65644/239‑1 (MQ=255) aCAAGATCCGCTGGCGTATTTAGAGC‑GTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAAC‑TGGCGCGACCGATTTTACCCGTCAAATGGCGGCGGTGGCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACggg > 1:314079/1‑250 (MQ=255) aaGATCCGCTGGCGTATTTAGAGC‑GTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAAC‑TGGCGCGACCGATTTTACCCGTCAAATGGCGGCGGTGGCGTTTGCCAGTGTTGCGCGGCAGGGTGCTGGGAATGCACGGCtg > 1:310144/1‑251 (MQ=255) aGATCCGCTGGCGTATTTAGAGC‑GTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAAC‑TGGCGCGACCGATTTTACCCGTCAAATGGCGGCGGTGGCGTTTGCCCGGGTGGGGCGGCAgggtgtcgggaatggacgggtgg > 1:160458/1‑230 (MQ=255) gcgggCGTATGTGGAGC‑GTATCCGTCTGGCGATGACAGCGGGTAACACTGGCCTGTTAACACTGCTGGCAGGGCAGATGCCGGCCGATTACCAGACTATCGCCTCGGAAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAAC‑TGGTGCGTCCGATTTTACCCGTCAAATGGCTGCGGTGGCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATTATct < 2:168901/248‑2 (MQ=255) tAGAGC‑GTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAAC‑TGGCGCGACCGATTTTACCCGTCAAATGGCGGCGGTGGCGTTTGCCCGTGTGGCCCGGCAGGATGCTGGGGATGCCCGGGTGATGATCCCAtaccctccc > 1:142055/1‑243 (MQ=255) cGTCGGGCGATGAAAGCCGGGAACTCCGGCCTTGTATCATTGCTGGCAGGGCTGATGTCTGCCGATTACCAGATTACCGCCTCGGCAATCATTTCACTGGCGAATAACCCTAATACGGTACTGACCTTCGCGTGTACAAC‑TGGCGCGTCCGATTTTCCCCGGCAAATGGCGGCGGGGGCGTTTGGCAGTGTTGTGCGGCAGGATGCTGAGAATGCACGGCTGATGATCCCATCGCTTGCCCAGGCgcagca < 1:312597/251‑1 (MQ=255) gTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACCACCATACTCCGGTACTGACCTTCGCGCGTACAAC‑TGGCGCGACCGATTTTACCCGTCAAATGGCGGCGGGGGGGTTTGCCCGTGTGGCGCGGCAGGGTGCTGAGAATGCACGGCTGAGGGTCCCCTCGCtgtacccggggccgacg > 2:276834/1‑235 (MQ=255) ggCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAAC‑TGGCGCGACCGATTTTACCCGTCAAATGGCGGCGGTGGCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTa < 1:482203/251‑1 (MQ=255) gATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAAC‑TGGCGCGACCGATTTTACCCGTCAAATGGCGGCGGTGGCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATg < 2:280920/251‑1 (MQ=255) gAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAAC‑TGGCGCGACCGATTTTACCCGTCAAATGGCGGCGGTGGCGTTTGCCAGTGTGGCGCGGCAGGGTGCTGGGAATGCACGGCTGATGATCCCATCCCCTGCCCAGGCGCAGCAGCTTAATgg > 1:362127/1‑248 (MQ=255) gAAAGCGGGTAACACAGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAAC‑TGGCGCGACCGATTTTACCCGTCAAATGGCGGCGGTGGCGGTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGATCCCATCGCTTGCCCCGGCGCAGCAGCTTAATGaa > 1:304565/1‑250 (MQ=255) aGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAAC‑TGGCGCGACCGATTTTACCCGTCAAATGGCGGCGGTGGCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATc < 1:276834/251‑1 (MQ=255) cGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAAC‑TGGCGCGACCGATTTTACCCGTCAAATGGCGGCGGTGGCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATccg > 1:4184/1‑249 (MQ=255) | CGTGGCTTGTTAGCCTTTAGCCCGGAAAAGCCCGGAACTACCGAAGCGCAATGTAATTACTACTATGCGAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAAGGGGCGAAAGAGCTGTGGCTAACCGGCAAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGCGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGC‑GTATCCGTCTGGCGATGAAAGCGGGTAACACAGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAAC‑TGGCGCGACCGATTTTACCCGTCAAATGGCGGCGGTGGCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAG > NC_000913/4631078‑4631563 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |