| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,626,808 | A→C | S299S (TCA→TCC) | radA → | DNA recombination protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,626,808 | 0 | A | C | 96.2% | 163.0 / ‑3.0 | 52 | coding (897/1383 nt) | radA | DNA recombination protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base C (22/28); minor base . (0/2); total (22/30) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.02e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01 | |||||||||||
GGTGGGGCACGTAACCAAAGATGGTTCGCTGGCTGGCCCGAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGCGATGAAGTGACCTCCGGTAG‑C‑TCAGTGATGGTGGTATG‑GGAAGGAACGCGTCCACTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAACCCACGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGTGTTGCACCGTCACGGTGGTCTGCAAATGGCCGATCAGGATGTGTTTGTGAACG‑TGGTCGGCGGCGTGAAGGTAACCGAAACCAGTGCCGACTTAGCGTTACTG > NC_000913/4626562‑4627045 | ggttggacACGTAACCAAAGATGGCTCGCTGGCGGGCCCTCAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGGGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGGGATGAAGTGCCCTCCGGCAG‑C‑TCCGTg > 2:473478/8‑250 (MQ=255) ggacACGTAACCAAAGATGGCTCGGTGGCGGGCCCTAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTGAATTCGCGGAGATGAAGTGACCTCCGGCAG‑C‑TCCGTGTtggt < 1:130828/248‑1 (MQ=255) aTGGCTCGCTGGCGGGCCCTAAAGTGCTGGAACAATGTATCGCCTGTTCGGAGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCCTAAAAACCGCTTCGACGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAG‑C‑TCCGTGGTGGAGGTGTG‑GGAGGGAAcg > 1:425064/1‑251 (MQ=255) ggctcggtggcgggcCCTAAAGGGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGATTCACGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGGCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAG‑C‑TCCGTGATGGTGGTGTG‑GGAAGGAAcgcg < 2:302943/244‑1 (MQ=255) ggcCCTAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAG‑C‑TCCGTGATGGTGGTGTG‑GGAAGGAACGCGTCCGTTGCtggt > 1:91866/1‑251 (MQ=255) ggcCCTAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTGTTCGCACTTTACGCAGCCATAAAACCCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAG‑C‑TCCGTGATGGTGGTGTG‑GGAAGGAACGCGTCCGTTGCtggt < 1:120539/251‑1 (MQ=255) ccctaaaGTGCTGGAACCCTGTATCGACTGTTCGGTGCTTTTGGATGTCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAG‑T‑TCCGTGATGGTGGTGTG‑TGAAGGAACGCGTccgtttctggtgg < 1:171858/247‑12 (MQ=255) aaGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAG‑C‑TCCGTGATGGTGGTGTG‑GGAAGGAACGCGTCCGTTGCTGGTGGAGAtt > 1:343875/1‑251 (MQ=255) ggAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAG‑C‑TCCGTGATGGTGGTGTG‑GGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGgc < 1:404747/249‑1 (MQ=255) gAACACTGTATCGACTGGTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAG‑C‑TCCGTGATGGTGGTGTG‑GGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCt < 1:161784/251‑1 (MQ=255) aCTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACTGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAG‑C‑TCCGTGATGGTGGTGTG‑GGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCg < 1:39303/251‑1 (MQ=255) cGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAG‑C‑TCCGTGAtggtgg > 2:29904/1‑189 (MQ=255) cGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAG‑C‑TCCGTGAtggtgg < 1:29904/189‑1 (MQ=255) tGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAACAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCCG‑C‑TCCGTGCTGGTGGTGTG‑GGAAGGACCGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCCCTCGGTGCTGGCg > 2:212386/1‑251 (MQ=255) gATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAG‑C‑TCCGTGATGGTGGTGTG‑GGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGaatccgcg > 1:446654/1‑245 (MQ=255) gttgttGCCGACTCCCGTTTTGTCACGTTACGCGTCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATTACCGAACAGGGGCGGCGTGAAGTTAGCAACCCTTCGGCAATTTTCTTAAGGCGCGGAGATGAAGTTACCGCCGGCAG‑C‑TCCGTGATGGTGGTGTG‑AGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATggttaatccgcgcc < 2:392566/245‑13 (MQ=255) ccGACTCCCGTTTTCGCACTTTACGCAGCCATAAAACCCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAG‑C‑TCCGTGATGGTGGTGTG‑GGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGCTCACTCGATGATGGCGAATCCGCGCCGCGTGGcc > 2:280454/1‑250 (MQ=255) ccGACCCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAG‑C‑GCCGTGATGGTGGTGTG‑GGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCa < 2:76635/251‑1 (MQ=255) gcctccctgtttCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAG‑C‑TCCGTGATGGTGGTGTG‑GGAAGGAACGCGTCCGTTGCTGGGGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGt < 2:406707/242‑1 (MQ=255) cGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAG‑C‑TCCGTGATGGTGGTGTG‑GGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCt < 1:9160/251‑1 (MQ=255) tctccaccgttcctcagcaaaaaaaaCCGCTTCGGCGCGGTGAAGGAGCTGGGTGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCACCCGGTCGGCAAGTTTCGTAAGGCGCGGAGATGAAGTGACCTCCGGCAG‑C‑TCCGTGATGGTGGTGTG‑GGAAGGAACGCGGCCGTTGCTGGTGGAGATTCAGGCGCTGGGAGATCACTTGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTgg < 2:345242/229‑1 (MQ=255) cactttacgcggcaatagaaaCCGCTTCGGCGCGGTGCATGAGCTGGTCGTCATCGCGATGACCGAACAGGGGCTGCGTGAAGTAAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAG‑C‑TCCGAGATGATGG‑AGGTGGAAAGCACGCGTCCGTTGCTGGAGGAGCTTCAGGCGCTGGACGATCACTCTATAATGGCGCATCAGCGCCGCATGGCAGTGGGGCTGGGACac > 2:170939/19‑249 (MQ=255) cgcAGCCATAAAAACCGCTGCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAG‑C‑TCCGTGATGGTGGTGTG‑GGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCt < 2:129521/251‑1 (MQ=255) aGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAG‑C‑TCCGTGATGGTGGTGTG‑GGAAGGAACGCGTCCGGTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGGGGCAGTGGGTCTGGCACAAAACCGTATGGc > 2:764/1‑251 (MQ=255) aaCCGCTGCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAG‑C‑TCCGTGATGGTGGTGTG‑GGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCctgct < 1:357774/251‑1 (MQ=255) aCCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAG‑C‑TCCGTGATGGTGGTGTG‑GGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCctgctg > 1:59988/1‑251 (MQ=255) cGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAG‑C‑TCCGTGATGGTGGTGTG‑GGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCtgtc < 1:292824/250‑2 (MQ=255) ggTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAG‑C‑TCCGTGATGGTGGTGTG‑GGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGTCTTGCAcc < 1:359403/251‑1 (MQ=255) aTGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAG‑C‑TCCGTGATGGTGGTGTG‑GGAAGGAACGCGTCCGTTGCTGGTGGAGCTTCAGGCGCTGGTCGATCACTCGATGATGGCGTATCCGCGCCGCGTGGCAGTGGGGCTGGAACACAACCGTATGGCAATCCTGCTGGCTGCCTTGCACCGtacc > 2:413595/1‑248 (MQ=255) gggCGTCGGCGCGATGAACGAACAGGGGATGCGTGAAGTCAGCAACCCTTCGGCAATTTTCGTAAGTCGCGGAGATGAAGTGACCGCCGGCAG‑C‑TCCGTGATGGTGGTGTG‑GGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGTCTTGCACCGTCACggtggt < 2:51192/250‑1 (MQ=255) ggCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAG‑C‑TCCGTGATGGTGGTGTG‑GGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCTCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGTCTTTCACCGTACCGGTGGTCt > 2:214503/1‑251 (MQ=255) gggccTTCGCGATGACCGAACAGGGGCTTCGGGAAGTCAGCAACCCTGCGGCAATTTTCGTAAGTCGCGGATATGAAGTGACCTCCGGCAG‑C‑TCCGTGATGGTGGTGTG‑GGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGTCTTGCACCGTCACGGTGGTCTg < 2:423422/247‑1 (MQ=255) gATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAG‑C‑TCCGTGATGGTGGTGTG‑GGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGTCTTGCACCGTCACGGTGGTCTGCAAATGGCCg > 1:72453/1‑251 (MQ=255) cGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAG‑C‑TCCGTGATGGTGGTGTG‑GGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGTCTTGCACCGTCACGGTGGTCTGCAAATGGCCGATCAgg < 1:96014/251‑1 (MQ=255) aaCAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAG‑C‑TCCGTGATGGTGGTGTG‑GGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGTCTTGCACCGTCACGGTGGTCTGCAAATGGCCGATCAGGAt > 1:233169/1‑251 (MQ=255) aaCAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTAGCGGAGATGAAGTGACCTCCGGCAG‑C‑TCCGTGATGGTGGTGTG‑GGAAGGAACGCGTCCGTTGCTGGGGGAGATTCAGGCACTGGTCGGTCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGCCTGGCAATCCTGCTGGCTGTCTTTCACCGGCAGGGTGGTCTGCAAATGGCCGATCAggct > 1:9517/1‑249 (MQ=255) gggCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAG‑C‑TCCGTGATGGTGGTGTG‑GGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGTCTTGCACCGTCACGGTGGTCTGCAAATGGCCGa > 1:213920/1‑239 (MQ=255) gggCTGCGTGAAGTCAGCAACCCTGCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAG‑C‑TCCGTGATGGTGGTGTG‑GGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGTCTTGCACCGTCACGGTGGTCTGCAAATGGCCGa < 2:213920/239‑1 (MQ=255) gCGTGAAGTCAGCATCCCTGCGGTAATTTTCTTAATGCGCGGAGATGAAGTGACCTCCGGCAG‑C‑TCCGGGATGGTGGTGTG‑GGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGTCTTGCACCGTCACGGTGGTCTGCAAATGGCCGATCAGGATGTGTTtgt < 2:347776/249‑1 (MQ=255) ggAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAG‑C‑TCCGTGATGGTGGTGTG‑GGAAGGAACGCGTCCGGTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGTCTTGCACCGTCACGGTGGTCTGCAAATGGCCGATCAGGATGTGTTTGTGAACg < 2:413023/250‑1 (MQ=255) gTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAG‑C‑TCCGTGATGGTGGTGTG‑GGAAGGAACGCGTCCGTTGCTGGAGGAGATTCAGGAGCTGGTCGATCACTCGATGATGGCGAATCCGCGACGAGTGGCAGTGGGGCTGGAAAAAAACCGTCTGGCAATCCTGCTGGCTGTCTTGCACCGTCACGGTGGTATGCAAATGGCCGTTAAGGATGTGTTGTTGAACG‑TGGt > 1:334216/1‑251 (MQ=255) cAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAG‑C‑TCCGTGATGGTGGTGTG‑GGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGaa < 1:26416/163‑1 (MQ=255) aGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAG‑C‑TCCGTGATGGTGGTGTG‑GGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGTCTTGCACCGTCACGGTGGTCTGCAAATGGCCGATCAGGATGTGTTTGTGAACG‑TGGTcgg > 1:92991/1‑251 (MQ=255) cGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAG‑C‑TCCGTGATGGTGGTGTG‑GGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGTCTTGCACCGTCACGGTGGTCTGCAAATGGCCGCTCAGGATGTGTTTGTGAACG‑TGGTCGGCGGCGTGa > 1:49711/1‑249 (MQ=255) gCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAG‑C‑TCCGTGATGGTGGTGTG‑GGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGCTGATGGCGACTCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGTCTTGCACCGTCACCGTGGTCTGCCAATGGCCGATCCGGCTGTGTTTATGAACGCTGG‑CGGCGGCGTGACGGt > 2:17055/1‑251 (MQ=255) cAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAG‑C‑TCCGTGATGGTGGTGTG‑GGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGTCTTGCACCGTCACGGTGGTCTGCAAATGGCCGATCAGGATGTGTTTGTGAACG‑TGGTCGGCGGCGTGAAGGt > 1:341481/1‑250 (MQ=255) aGTCGGGGAGATGAAGTGACGTCCGGCAGGC‑GC‑GTGATGGTGGTGTG‑GGAAGGAACGCGTTCGTTGCTGGTGGAGAGTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGTCTTGCACCGTCACGGTGGTCTGCAAATGGCCGATCAGGATGTGTTTGTGAACG‑TGGTCGGCGGCGTGAAGGTAACCGAAACCAg < 2:137365/251‑1 (MQ=255) ggagATGAAGTGACCTCCGGCAG‑CCTC‑GTGATGGGGGGGGG‑GGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAAGCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGTCTTGCACCGTCACGGTGGTCTGCAAATGGCCGATCAGGATGTGTTTGTGAACG‑TGGTCGGCGGCGTGAAGGTAACCGAAACCAGCGCCGa < 2:204339/248‑1 (MQ=255) gATGAAGTGACCTCCGGCAG‑C‑TCCGTGATGGTGGTGTG‑GGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGTCTTGCACCGTCACGGTGGTCTGCAAATGGCCGATCAGGATGTGTTTGTGAACG‑TGGTCGGCGGCGTGAAGGTAACCGAAACCAGCGCCGACtt < 1:45882/251‑1 (MQ=255) aTGAAGTGACCTCCGGCAG‑C‑TCCGTGATGGTGGTGTG‑GGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGTCTTGCACCGTCACGGTGGTCTGCAAATGGCCGATCAGGATGTGTTTGTGAACG‑TGGTCGGCGGCGTGAAGGTAACCGAAACCAGCGCCGACTTa < 1:389398/251‑1 (MQ=255) aGTGACCTCCGGCAG‑C‑GCCGTGATGGTGGTGTG‑GGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGTCTTGCACCGTCACGGTGGTCTGCAAATGGCCGATCAGGATGTGTTTGTGAACG‑TGGTCGGCGGCGTGAAGGTAACCGAAACCAGCGCCGACTTAGCGt < 1:396544/251‑1 (MQ=255) ccTCCGGCAG‑C‑TCCGTGATGGTGGTGTG‑GGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGTCTTGCACCGTCACGGTGGTCTGCAAATGGCCGATCAGGATGTGTTTGTGAACG‑TGGTCGGCGGCGTGAAGGTAACCGAAACCAGCGCCGACTTAGCGTTActg < 1:414251/251‑1 (MQ=255) | GGTGGGGCACGTAACCAAAGATGGTTCGCTGGCTGGCCCGAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGCGATGAAGTGACCTCCGGTAG‑C‑TCAGTGATGGTGGTATG‑GGAAGGAACGCGTCCACTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAACCCACGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGTGTTGCACCGTCACGGTGGTCTGCAAATGGCCGATCAGGATGTGTTTGTGAACG‑TGGTCGGCGGCGTGAAGGTAACCGAAACCAGTGCCGACTTAGCGTTACTG > NC_000913/4626562‑4627045 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |