| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 5,642 | A→C | intergenic (+112/+41) | yaaX → / ← yaaA | DUF2502 domain‑containing protein YaaX/DNA binding and peroxide stress response protein YaaA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 5,642 | 0 | A | C | 93.6% | 128.6 / ‑1.0 | 48 | intergenic (+112/+41) | yaaX/yaaA | DUF2502 domain‑containing protein YaaX/DNA binding and peroxide stress response protein YaaA |
| Reads supporting (aligned to +/- strand): ref base A (2/1); new base C (16/28); total (19/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.49e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.35e-01 | |||||||||||
GGCTGGTGGAAACAACATTATGAATGGCGAGGCAATCGCTGGCACCTACACGGACCGCCGCCACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCC‑TGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGT‑AGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAATCTTCATCAAAGAAGTAACCTTCGCTAT‑TAAAACCAGTCAGTTGCTCTGGTTTGGTCAGCCGATTTTCAATAATGAAACGACTCATCAGACCGCGTGCTTTCTTAGCGTAGAAGCTGATGATCTTAAATTTGCCGTTCTTCTCATCG > NC_000913/5396‑5878 | ggcgggtgaAAACAACATTATGAATGGCGGGGCAACCGTGGGCCCCCACCCGGACCGCCGCCACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCC‑TGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTGAATTCTGCAATATATTGAATCTGCATGCTTTTGT‑AGGCCGGAt < 2:421047/247‑1 (MQ=255) ggttgAAACAACATTATGAAGGGCGAGGCAATCGCTGGCACCCACACGGACCGCCGCCACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCC‑TGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTGAATTCTGCAATATATTGAATCTGCATGCTTTTGT‑AGGCCGGATaa < 1:125621/245‑1 (MQ=255) aacaTTATGAATGGCGAGGCAATCGCTGGCACCCACACGGACCGCCGCCACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGACCTGGGCCAGGCAAACATCACCGCCAAATGACAAATGCCGGGGAACAATCCCGCATTCAGCGCC‑CGATGCGACGCTGGCGCGGCTTTTCAGGCCTACGTGAATTTTTCCATATATTTAATCTGCATGCTTTTTTTAGAC‑GGATAAGGCGTTCAcgc > 1:215961/1‑251 (MQ=255) acaTTATGAATGGCGAGGCAATCGCTGGCCCCCACACGGACCGCCGCCACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCC‑TGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTGAATTCTGCAATATATTGAATCTGCATGCTTTTGT‑AGGCCGGATAAGGCGTTCAcgcc < 1:193845/251‑1 (MQ=255) gAATGGCGAGGCAATCGCTGGCACCCACACGGACCGCCGCCACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCCGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCC‑TGATGCGCCGCTGGCGCGTCTTATCAGGCCTGCGTGAATTCTGCAATATATTTAATCTGCATGCTTTTGT‑AGGCCGGATAAGGCGGTCACGCCGCATCCg > 1:460848/1‑251 (MQ=39) cAATCGCTGGCACCCACACGGACCGCCGCCACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCCTGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGGAAAAATCCGGCATTCAGCGCC‑CGATGAGACGCTGGCGCGTCTTATCAGGCCTACGTGAATTCTGCAATATATTGAATCTGAATGGTTTTTT‑AGTACGGATAAGGGGTTCCCGCCGCATCCGGCCATGACTGc > 2:336895/1‑251 (MQ=255) acggcccccccccACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCCCGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCC‑TGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTGAATTCTGCAATATATTGAATCTGCATGCTTTTGT‑AGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCg < 2:402508/240‑1 (MQ=255) ccagccccccgccgCGCCACCATAAGAAAGCTCCTCAGGATCATCCCGGCTGTCATGGTCCAGGCAAACATCACCGCGAAATGCCAAAGGCCGGGTAACAATCCGGCATTCAGCGCC‑TGATGCGACGCGGGCGCGTCTTATCAGGCCTACGTGAATTCGGCAATATATTGAATCTGCATGCTTTTGT‑AGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGt < 2:76186/243‑1 (MQ=37) aGAAAGCTCCCCAAGATCATCACGGCGTTCATGGTCCAGCCAAACATCACCGCTAAATGACAAAGGCCGGGAAACAATCCGGCATTCAGCGCC‑TGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTGAATTCTGCAATATATTGAATCTGCATGCTTTTGT‑AGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTg < 2:92059/251‑1 (MQ=38) aaGCTCCTCAGGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCTCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCC‑TGAGTCGACGCTGACGCGTCTTATCAGGCCTACGTGAATTCTGCAATAAATTGAATCTGCATGCTTTTGT‑AGGCCGTATAAGGCGTTCACGCCGCATCCGGAAGTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTggag < 1:304209/251‑1 (MQ=255) atcatcACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATTACAAAAGCCGGGTAACAATCCGGCATTCAGCGCC‑TGATGCGACGCTGGCGGGTCTTATCAAGCCTACGTGAATTCTGCAATATATTGAATCTGCATGCTTTTGT‑AAGCCGGATAAGGCGTTCACGCCGCATCCGGCCTTGACTGCCAAATTAACGCTGCTCGTAACGTTTAAACCCCAGTTCGCCCTTGCTTGGGGAAGCTtcatc > 2:149252/1‑250 (MQ=255) atcaCGGCGGTCCTGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCCTG‑TGCGACGCTGGCGCGTCTTATCAGGCCTACGTGGATTCTGCAATATATTGGAACTGCATGCTTTTGT‑TGGCCGGGTAAAGCGTTCCCGCCCCATCCCGCATTTTTTGCACACTTAACGCCGCTCGTATCGTTTTAACACCCGTTCGCCACTTCTGGAGGGAGCTTCATCaaa > 2:95002/1‑250 (MQ=255) aacaCGGCGGTCATGGTCCAGGCAAACATCCCCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCC‑TGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTGAATTCTGCAATATATTGAATCTGCATGCTTTTGT‑AGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAGGCTTCATCAaag < 2:141466/249‑1 (MQ=255) tGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCC‑TGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGT‑AGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAATCTTCATCAAAGAAGTAACCTTCGc > 1:14356/1‑251 (MQ=255) ggTCCAGGCAAACATCACCGCTAAATGTCAAATGCCGGGTAACAATCCGGCATTCAGCGCC‑TGTTGCGACGCTGGCGCGTCTTATCAGGCCTACGTGAATTCTGCAATATATTGAATCTGCATGCTTTTGT‑AGGCCGGATAAGGCGTTCACGCCGCATCCGTCATTGACTGCAAACTGAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAAGCTTCATCAAAGAAGTAACCTTCGCt < 2:69473/251‑1 (MQ=38) gCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCC‑TGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGT‑AGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAATCTTCATCAAAGAAGTAACCTTCGCTAT‑Taaaa < 1:85385/251‑1 (MQ=255) cAAACATCACCGCTAAATGACAAAGGCCGGGTAACAATCCGGCATTCAGCGCC‑TGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTGAATTCTGCAATATATTGAATCTGCATGCTTTTGT‑AGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAAGCTTCATCAAAGAAGTAACCTTCGCTAT‑TAAAAc < 2:98296/251‑1 (MQ=255) aaCATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCC‑TGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTGAATTCTGCAATATATTGAATCTGCATGCTTTTGT‑AGGCCGGTTAAGGCGTTCACGCCGCATCCGGCATTGACTGCAACCTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAAGCTTCATCAAAGAAGTAACCTTCGCTAT‑TAAAAcc > 2:296565/1‑250 (MQ=255) cACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCC‑TGATGCGACGCTTGCGCGTCTTATCAGGCCTACGTGAATTCTGCAATATATTGAATCTTCATGCTTTTGT‑AGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTGTCTGCAAACTTAACGCTGCTCGTAGCGTTTAAACCCCAGTTCGCCATTGCTGGAGGAAGCTTCATCAAAGAAGTAACCTTCGCTAT‑TAAAACcagtcag < 1:439835/251‑1 (MQ=39) ccccatAAATTACAAATGCCGGGTAACAATCCGGCATTCAGCTCC‑TTATGCGACGCTGGCTCGTCTTATCAGGCCTACGTGAATTCTGCAATATATTGAATCTGCATGCTTTTGT‑AGGCCGGATAAGGCGTTCACGCCGCATCCTGCATTGACTGCAAACTTAACTCTGCTCGTAGCGTTTAAACGCCAGTTCGCCATTGCTGGAGGAAGCTTCATCAAAGAAGTAACCTTCGCTAT‑TAAAACcagtcagt < 1:367707/246‑1 (MQ=37) cGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCC‑TGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTGAATTCTGCAATATATTGAATCTGCATGCTTTTGT‑AGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAAGCTTCATCAAAGAAGTAACCTTCGCTAT‑TAAAACCAGTCAGTTg > 1:325564/1‑251 (MQ=255) aTGACAAATGCCGGGTAACAATCCGGCATTCAGCGCC‑GGAGGCGACGCGGGCGCGTCTTATCAGGCCTACGTGAATTCTGCAATATATTGAATCGGCATGCTTTTGT‑AGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAAGCTTCATCAAAGAAGTAACCTTCGCTAT‑TAAAACCAGTCAGTTGCTCTgg < 2:124790/251‑1 (MQ=39) acaTGCCGGGTAACAAACAGGCATTCAGCGCC‑TGATGCGAAGCTGGCGCGTCTTATAAGGCCTACGAGAATTCTGCAATATATTGAATCTGCATGCGTTTGT‑AGGCAGGATAAGGCGTGCACGCCGCATCCGGCATTGACTGCAAACTTAAAGCTGCTCGTAGCGTTTAAACAACAGGTAGCCATTGCTGGAGGAAGCTTAATAAAAGAAGAAACCATAG‑AATGTAAAGCCAGTCAGTGGATCTGGTTTgg > 2:321392/3‑251 (MQ=255) aaTGCCGGGTAAAAATCCGTCATTCGGCGCC‑TGATGCGACTCTGGCGCGTTTTATCAGTCGTACGTGAATTCTGCAATATATTGAATCTGCATGCTTTTGT‑AGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAAGCTTCAGCAAAGAAGGAACCTTCTCTAT‑TAAAACCAGTCAGGTGCTCTTGTTTGGt < 2:228191/251‑1 (MQ=37) gTAACAATCCGGCATTCAGCGCC‑TGATTCGCCGCTGGCGCGTCTTATCAGGCCTACGTGAATTCTGCAATATATTGAATCTGCATGCTTTTGT‑AGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAAGCTTCATCAAAGAAGTAACCTTCGCTAT‑TAAAACCAGTCAGTTGCTCTGGTTTGGTCAGCCGAt < 1:96595/251‑1 (MQ=255) gTAAAAATCCGGCTTTCAGCGCC‑TGAGGCGACGCTGGCGGGTCTTATCAGGCCTACGTGAATTCTGCAATATATTGAATCTGCATGCTTTTGT‑AGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAAGCTTCATCAAAGAAGTAACCTTCGCTAT‑TAAAACCAGTCAGTTGCTCTGGTTTGGTCAGCCGAt < 1:8848/251‑1 (MQ=39) aCAATCCGGCATTCAGCGCC‑TGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTGAATTCTGCAATATATTGAATCTGCATGCTTTTGT‑AGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGATCGCCATTGCTGGAGGAAGCTTCATCAAAGAAGTAACCTTCGCTAT‑TAAAACCAGTCAGTTGCTCTGGTTTGGTCAGCCGAtttt < 1:361870/251‑1 (MQ=255) cAATCCGGCATTCAGCGCC‑TGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTGAATTCTGCAATATATTGAATCTGCATGCTTTTGT‑AGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAAGCTTCATCAAAGAAGTAACCTTCGCTAT‑TAAAACCAGTCAGTTGCTCTGGTTTGGTCAGCCGATTTTc > 1:256757/1‑251 (MQ=255) ggCATTCAGCGCC‑TGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTGAATTCTGCAATATATTGAATCTGCATGCTTTTGT‑AGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGATGGAGGAAGCTTCATCAAAGAAGTAACCTTCGCTAT‑TAAAACCAGTCAGTTGCTCTGGTTTGGTCAGCCGATTTTCaataat > 1:413063/1‑251 (MQ=255) cAGCGCC‑TGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTGAATTCTGCAATATATTGAATCTGCATGCTTTTGT‑AGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAAGCTTCATCAAAGAAGTAACCTTCGCTAT‑TAAAACCAGTCAGTTGCTCTGGTTTGGTCAg > 1:195469/1‑230 (MQ=255) cAGCGCC‑TGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTGAATTCTGCAATATATTGAATCTGCATGCTTTTGT‑AGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAAGCTTCATCAAAGAAGTAACCTTCGCTAT‑TAAAACCAGTCAGTTGCTCTGGTTTGGTCAg < 2:195469/230‑1 (MQ=255) cgcC‑TGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTGAATTCTGCAATATATTGAATCTGCATGCTTTTGT‑AGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAAGCTTCATCAAAGAAGTAACCTTCGCTAT‑TAAAACCAGTCAGTTGCTCTGGTTTGGTCAGCCGATTTTCAATAATAAAACGACt < 1:336895/251‑1 (MQ=255) c‑TGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTGAATTCTGCAATATATTGAATCTGCATGCTTTTGT‑AGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAAGCTTCATCAAAGAAGTAACCTTCGCTAT‑TAAAACCAGTCAGTTGCTCTGGTTTGATCAGCCGATTTTCAATAATAAAACGACtcat > 1:367893/1‑251 (MQ=255) gATGCGACGCTGGCGCGTCTTATCAGGCCTACGTGAATTCTGCAATATATTGAATCTGCATGCTTTTGT‑AGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACTCCAGTTCGCCATTTCTGGAGGAAGCTTCATCAAAGAAGTAACCTTCGCTAT‑TAAAACCAGTCAGTTGCTCTGGTTTGGTCAGCCGATTTTCAATAATAAAACGACtcat < 1:53679/249‑1 (MQ=255) gCGACGCTGGCGCGTCTTATCAGGCCTACGTGAATTCTGCAATATATGGAATCTGCATGCTTTTGT‑AGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAAGCTTCATCAAAGAAGTAACCTTCGCTAT‑TAAAACCAGGCAGTTGCTCTGGTTTGGTCAGCCGATTTTCAATAATAAAACGACTCATCAGAc < 2:215961/251‑1 (MQ=255) cGACGCTGGCGCGTCTTATCAGGCCTACGTGAATTCTGCAATATATTGAATCTGCATGCTTTTGT‑AGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAAGCTTCATCAAAGAAGTAACCTTCGCTAT‑TAAAACCAGTCAGTTGCTCTGGTTTGGTCAGCCGATTTTCAATAATAAAACGACTCATCAGAcc > 1:165730/1‑251 (MQ=255) gccGCTGGCGCGTCTTATCAGGCCTACGTGAATTCTGCAATATATTGAATCTGCATGCTTTTGT‑AGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAAGCTTCATCAAAGAAGTAACCTTCGCTAT‑TAAAACCAGTCAGTTGCTCTGGTTTGGTCAGCCGATTTTCAATAATAAAACGAc > 1:318833/3‑240 (MQ=255) gagtcTGGCTCGTCTTATCAGGCCTACGTGAATTCTGCAATATATTGAATCTGCATGCTTTTGT‑AGGCCGGATAAGGCGTTCACGCCGCAGCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAAGCTTCATCAAAGAAGTAACCTTCGCTAT‑TAAAACCAGTCAGTTGCTCTGGTTTGGTCAGCCGATTTTCAATAATAAAACGAc < 2:318833/236‑1 (MQ=38) gCTGGCGCGTCTTATCAGGCCTACGTGAATTCTGCAATATCTTGAATCTGCATGCTTTTGT‑AGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAAGCTTCATCAAAGAAGTAACCTTCGCTAT‑TAAAACCAGTCAGTTGCTCTGGTTTGGTCAGCCGATTTTCAATAATAAAACGACTCATCAGACCGCGt > 1:181019/1‑251 (MQ=255) gcgcGTCTTATCAGGCTTACGTGAATTCTGCAATATATTGAATCTGCATGCTTTTGT‑AGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAAGCTTCATCAAAGAAGTAACCTTCGCTAT‑TAAAACCAGTCAGTTGCTCTGGTTTGGTCAGCCGATTTTCAATAATAAAACGACTCATCAGACCGCGTGCtt < 1:149252/251‑1 (MQ=255) cgTCTTATCAGGCCTACGTGAATTCTGCAATATATTGAATCTGCATGCTTTTGT‑AGGACGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAAGCTTCATCAAAGAAGTAACCTTCGCTAT‑TAAAACCAGTCAGTTGCTCTGGTTTGGTCAGCCGATTTTCAATAATAAAACGACTCATCAGACCGCGTGCTTTCt > 1:165775/1‑251 (MQ=255) tCTTATCAGGCCTACGTGAATTCTGCAATATATTGAATCTGCATGCTTTTGT‑AGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAAGCTTCATCAAAGAAGTAACCTTCGCTAT‑TAAAACCAGTCAGTTGCTCTGGTTTGGTCAGCCGATTTTCAATAATAAAACGACTCATCAGACCGCGTGCTTTCtt < 1:155971/250‑1 (MQ=255) aTCAGGCCTGCGTGAATTCTGCAATATATGGAATCTGCATGCTTTTGG‑AGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAAGCTTCATCAAAGAAGTAACCTTCGCTAT‑TAAAACCAGTCAGTTGCTCTGGTTTGGTCAGCCGATTTTCAATAATAAAACGACTCATCAGACCGCGTGCTTTCTTAGCg < 2:460848/250‑1 (MQ=255) ccggCCGACGTGAATTCTGCAATATTTTGAAGCTGCATGCTTTTGT‑AGGCCGGATAAGGCGTGCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAAGCTTCATCAAAGAAGTAACCTTCGCTAT‑TAAAACCAGTCAGTTGCGCTGGTTTGGTCAGCCGATTTTCAATAATAAAACGACTCAGCAGACCGCGTGCTTTCTTAGCGTAg < 2:256757/249‑1 (MQ=255) ccTACGTGAATTCTGCAATATATTGAATCTGCATGCTTTTGT‑AGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAAGCTTCATCAAAGAAGTAACCTTCGCTAT‑TAAAACCAGTCAGTTGCTCTGGTTTGGTCAGCCGATTTTCAATAATAAAACGACTCATCAGACCGCGTGCTTTCTTAGCGTAGAAGc > 1:18648/1‑251 (MQ=255) atTGAATCTGCATGCTTTTGT‑AGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAAGCTTCATCAAAGAAGTAACCTTCGCTAT‑TAAAACCAGTCAGTTGCTCTGGTTTGGTCAGCCGATTTTCAATAATAAAACGACTCATCAGACCGCGTGCTTTCTTAGCGTAGAAGCTGATTATCTTAAATTTGCCg < 1:95002/250‑1 (MQ=255) atcggCATGCTTTTGT‑AGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAAGCTTCATCAAAGAAGTAACCTTCGCTAT‑TAAAACCAGTCAGTTGCTCTGGTTTGGTCAGCCGATTTTCAATAATAAAACGACTCATCAGACCGCGTGCTTTCTTAGCGTAGAAGCTGATTATCTTAAATTTGCCGttcttc < 2:325564/247‑1 (MQ=255) aTGCTTTTGT‑AGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAAGCTTCATCAAAGAAGTAACCTTCGCTAT‑TAAAACCAGTCAGTTGCTCTGGTTTGGTCAGCCGATTTTCAATAATAAAACGACTCATCAGACCGCGTGCTTTCTTAGCGTAGAAGCTGATTATCTTAAATTTGCCGTTCTTCTCATCg > 1:409818/1‑251 (MQ=255) | GGCTGGTGGAAACAACATTATGAATGGCGAGGCAATCGCTGGCACCTACACGGACCGCCGCCACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCC‑TGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGT‑AGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAATCTTCATCAAAGAAGTAACCTTCGCTAT‑TAAAACCAGTCAGTTGCTCTGGTTTGGTCAGCCGATTTTCAATAATGAAACGACTCATCAGACCGCGTGCTTTCTTAGCGTAGAAGCTGATGATCTTAAATTTGCCGTTCTTCTCATCG > NC_000913/5396‑5878 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |