| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,624,391 | C→G | A133A (GCG→GCC) | ytjB ← | putative inner membrane protein Smp |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,624,391 | 0 | C | G | 94.7% | 167.0 / ‑0.2 | 57 | A133A (GCG→GCC) | ytjB | putative inner membrane protein Smp |
| Reads supporting (aligned to +/- strand): ref base C (2/1); new base G (27/27); total (29/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.73e-01 | |||||||||||
TTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTGCGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTACA‑CCGATTGCCAGTGAGAGCAGCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGTGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTACCCGC‑AATTGGCTCGACAATCTGCTGGTTAAAATAGCCGCCTGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGCCAGAACGTGCGATAAGATCGCCTTGTTCGTCATACACACCCGCGTCGAGGATACGGCTTTCATCCGTTAACTGATCGAGGATCGCCTGAATGCGTTTTTCATCCGGTGAGTCGGTACGCATCAGCGGTGCAACGTTCAGCGTCACCTGACGCG > NC_000913/4624153‑4624632 | ttttCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTACG‑CCGATTGCCAGTGAAAGCAGCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGC‑AATTggttc < 2:401757/250‑4 (MQ=255)ttttCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGGGCGGGTCAGCACTACG‑CCGATTGCCAGTGAAAGCAGCAACATCAGGCGGAAAATGTTAGTGGTGTTAT‑CCACCTGTTTGGCTTCGGTGGCGGGCGTATGGGGGTCGGGCGTCAGGCGCAGATAAACGAGCGGTCCGTTTTTCCCGGC‑CATTGGTTCg > 1:391370/1‑251 (MQ=255) ctcGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGGACGTTTACCCTGTTGCAGCGTGCGGGTCAGCACTACG‑ACGATTGCCAGTGAAAGCAGCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCCCCTGTTGGGCTTCGGTGGCGGGCGGATGGGGGTCGGGCGTCCGGCGCAGATAGCCGAGCGGTCCGTTTTTTCCGGC‑CATTGGTTCGAcc > 1:433673/1‑249 (MQ=255) tcGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTTCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGGGCGGGTCAGCACTACG‑CCGCTTGCCCGTGAAAACAGCAACATCCGGCGTAAAATGTTAGTGGTGTTATTCCAC‑TGTTGGGCTTCGGTGGCGGGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGGCCGGTTTTCCCGGC‑AATTGGTTCGTCAAt > 1:439434/1‑251 (MQ=255) ttcctcttccGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTTCCCTGTAGCCGCGTGCGGGTCAGCACTACG‑CCGATTGCCAGTGAAAGCAGCAACATCAGGCGGAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGGGCGTATGGGGGTCGAGCGTCAGGCGCAGATAGCCGGGCGGTCCGTTTTTTCCGGC‑CATTGGTTCGACAATCTTCTGGt > 1:355266/1‑251 (MQ=255) tcctcttccGGCCCCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTACG‑CCGATTGCCAGTGAAAGCAGCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGC‑AATTGGTTCGACAATCTGCTGGt < 2:434238/250‑1 (MQ=255) tcctcttccGGCCCCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTACG‑CCGATTGCCAGTGAAAGCAGCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGC‑AATTGGTTCGACAATCTGCTGGt < 2:13241/250‑1 (MQ=255) tcctcttccGGCACCGGTTTGCTGGCGTTTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTACG‑CCGATTGCCAGTGAAAGCAGCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCTAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGC‑AATTGGTTCGACAATctgctg < 1:440692/248‑1 (MQ=255) tcctcctccGGCACCGGTTTGCTGGCGGGTAACAGGAAGGGCCATTGCTGCCAGCGGGTACGTTTACGCTGGAGCAGCGTGCGGGTCAGACCTACG‑CCGATTGCCAGTGAAAGCAGCAACAGCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTGTTCCCGGC‑AATTGGTTCGACAATCTGCTgg < 2:166404/249‑1 (MQ=255) tccGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTACG‑CCGATTGCCAGTGAAAGCAGCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGC‑AATTGGTTCGACAATCTGCTGGTTAAAAt < 1:78316/250‑1 (MQ=255) ggCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGGACGTTTTCCCTGTAGCAGCGGGCGGGGCAGCCCTACG‑CCGGTTGCCCGTGGAAGCAGCAACCTCAGGCGGAAAATGTTAGTGGGGTTAT‑CCACCTGTTGGGCTTCGGTGGCGGGCGTGTGGGGGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCAGCTTTTTCCGGC‑AATTGGGTCGCCAATCTGCTGGTTAAAATAgcc > 2:241672/1‑251 (MQ=255) cGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTACG‑CCGATTGCCAGTGAAAGCAGCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTTGCGAGCGTATGTGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGC‑AATTGGTTCGACAATCTGCTGGTTAAAATAgccgcccg < 1:285257/251‑3 (MQ=255) gTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGGACGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTAAG‑CCGATTGCCCGTGTAAGAAGCCACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTTGGGGGCGGGCGTATGGGTGTCGGGCGTCAGGCGCAGGTAGCCGAGAGGTCCGTTTTTCCCGGC‑AATTGGTTCGCCAAATTGCTGGTTAAACTAcccgcccgcc > 1:437045/1‑247 (MQ=255) ggTTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTACG‑CCGATTGCCAGTGAAAGCAGCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATCGCCGAGCGGTCCGTTTTTCCCGGC‑AATTGGTTCGACAATCTGCTGGTTAAAATATCCGCCCGCTTTTTTACCGt > 2:482843/1‑251 (MQ=255) gATTGCTGCCAGCGGGTACGTTTACCCTTTAGCAGCGTTCGGGTCAGCACTACG‑CCGATTGCCAGTGAAAGCAGCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGGGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGC‑AATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTc < 2:355266/251‑1 (MQ=255) gATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTACG‑CCGATTGCCAGTGAAAGCAGCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGC‑AATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTc > 1:165367/1‑251 (MQ=255) gATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTACG‑CCGATTGCCAGTGAAAGCAGCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGC‑AATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTc < 1:109060/251‑1 (MQ=255) aTTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTACG‑CCGATTGCCAGTGAAAGCAGCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGC‑AATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTcg > 1:261567/1‑251 (MQ=255) ctgcCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTACG‑CCGATTGCCAGTGAAAGCAGCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCGGGCGCAGATAGCCGATCGGTCCGTTTTTCCCGGC‑AATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTCgcgc > 1:424883/1‑250 (MQ=255) gggTCCGTTTCCCCTGTAGCAGCGTGCGGGGCAGCACT‑CAGCCGATCGCCAGTGAAAGCAGCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGGCGAGCGTCAGGCGCAGATATCCGAGCGGTCCGTTTTTCCCGGC‑AATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGGCGCGCACTTCGACg < 2:179621/251‑1 (MQ=255) aCCCTGTAGCAGCGTGCGGGTCAGCACTACG‑CCGATTGCCAGTGAAAGCAGCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGC‑AATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGcc > 1:68296/1‑249 (MQ=255) agcagcGTGCGGGTCAGCACTACG‑CCGATTGCCAGTGAAAGCAGCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGC‑AATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGCCAGAACgggc < 1:66029/251‑4 (MQ=255) cagcGTGCGGGTCAGCACTACG‑CCGATTGCCAGTGAAAGCAGCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGC‑AATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGCCAGAACGGGCg > 2:140155/1‑250 (MQ=255) cGTGCGGGTCAGCACTACG‑CCGATTGCCAGTGAAAGCAGCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGC‑AATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGCCAGAACGGGCGATaa < 2:391370/251‑1 (MQ=255) cAGCACTACA‑CCGATTGCCAGTGAGAGCAGCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGTGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTACCCGC‑AATTGGCTCGACAATCTGCTGGTTAAAATAGCCGCCTGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGCCAGAACGTGCGATAAGATCGCCtt > 1:237649/1‑251 (MQ=255) tacgccGATTGCCAGTGAAAGCAGCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGC‑AATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCttttttcc > 2:360671/5‑180 (MQ=255) tacgccGATTGCCAGTGAAAGCAGCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGC‑AATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTAc < 1:360671/178‑1 (MQ=255) acgccGATTGCCAGTGAAAGCAGCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGC‑AATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGGCGCGCACTTCGACG‑CTTTCGCCAGAACGGGCGATAAGATCGCCTTGTTCGTc > 2:439504/4‑251 (MQ=255) gaaagcagcAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTAGGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGC‑AATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTGTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGCCAGAACGGGCGATAAGATCGCCTTGTTCGTCATACACGCCCGCGTc < 1:47798/248‑1 (MQ=255) aaggcagcaACATCAGGCGAAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGACTTCGGAGGCGAGCGTATTGGAGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGATTTTCCCGGC‑AATTAGTTCGACAATCTGCTGGTTAAAATATCCACCCGCGTTTTTACCGTCGATCGCCACCCGGTCGCGCACTTCG‑CGACTTTCGCCCGAGCGGGCGATAAGATCACCTTGtacgaaataccagcccgactcg > 2:72363/4‑230 (MQ=255) gcaACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGC‑AATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGCCAGAACGGGCGATAAGATCGCCTTGTTCGTCATACACGCCCGCGTCGCGGAt > 1:358684/1‑250 (MQ=255) cATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTAGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGC‑AATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGCCAGAACGGGCGATAAGATCGCCTTGTTCGTCATACACGCCCGCGTCGAGGATACGGc > 1:35358/1‑251 (MQ=255) cAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGC‑AATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGCCAGAACGGGCGATAAGATCGCCTTGTTCGTCATACACGCCCGCGTCGAGGATACGGCttt < 1:391751/251‑1 (MQ=255) gTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGC‑AATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGCCAGAACGGGCGATAAGATCGCCTTGTTCGTCATACACGCCCGCGTCGAGGATACGGCTTTCATcc > 1:341866/1‑251 (MQ=255) gTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGC‑AATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGTCAGAACGGGCGATAAGATCGCTTTGTTCGTCATACACGCCCGCGTCGAGGATACGGCTTTCATCCGTTAAc < 1:406633/250‑1 (MQ=255) ggggtgTTAT‑CCGCCTGTTGGGCTTCGGTGGCGGGCGTTTGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGTTCCGTTTTCCCCGGC‑AATTGGTTCGACAACCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGCCAGAACGGGCGATAAGATCGCCTTGTTCGTCATACACGCCCGCGTCGAGGATACGGCTTTCATCCGTTAACTGATc < 2:261567/249‑1 (MQ=255) tAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGC‑AATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGCCAGAACGGGCGATAAGATCGCCTTGTTCGTCATACACGCCCGCGTCGAGGATACGGCTTTCATCCGTTAACTGATCGAGGAt < 1:480212/250‑1 (MQ=255) tAT‑CCACCGGTTGGGCTCCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGC‑AATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCCCTTCGACG‑CTTTCGCCAGAACGGGCGATAAGATCGCCTTGTTCGTCATACACGCCCGCGTCGAGGATACGGCTTTCATCCGTTAACTGATCGAGGAt < 2:165367/250‑1 (MQ=255) gTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGC‑AATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTT‑ACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGCCAGAACGGGCGATAAGATCGCCTTGTTCGTCATACACGCCCGCGTCGAGGATACGGCTTTCATCCGTTAACTGATCGAGGATCGCCTGAAt < 1:99725/249‑1 (MQ=255) ggCTTCGGTGGCGAGCGTATGGGTGTCGAGTGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTACCCGC‑AATTGGCTCGACAATCTGCTGGTTAAAATAGCCGCCTGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGCCAGAACGTGCGATAAGATCGCCTTGTTCGTCATACACACCCGCGTCGAGGATACGGCTTTCATCCGTTAACTGATCGAGGATCGCCTGAATGCGtt > 1:47189/1‑251 (MQ=255) cTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGC‑AATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGCCAGAACGGGCGATAAGATCGCCTTGTTCGTCATACACGCCCGCGTCGAGGATACGGCTTTCATCCGTTAACTGATCGAGGATCGCCTGAATGCGtttt > 1:481573/1‑251 (MQ=255) tGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGC‑AATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGCCAGAACGGGCGATAAGATCGCCTTGTTCGTCATACACGCCCGCGTCGAGGATACGGCTTTCATCCGTTAACTGATCGAGGATCGCCTGAATGCGTTTTTCATcc > 2:129227/1‑251 (MQ=255) cGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGC‑AATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCCCTTCGACG‑CTTTCGCCAGAACGGGCGATAAGATCGCCTTGTTCGTCATACACGCCCGCGTCGAGGCTCCGGCTTTCATCCGTTCACTGATCGAGGATCGGCTGGATGCgatgttaatcccgc > 2:365576/1‑238 (MQ=255) cGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGC‑AATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGCCAGAACGGGCGATAAGATCGcc < 1:310494/166‑1 (MQ=255) cGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGC‑AATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGCCAGAACGGGCGATAAGATCGcc > 2:310494/1‑166 (MQ=255) gTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGC‑AATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGCCAGAACGGGCGATAAGATCGCCTTGTTCGTCATACACGCCCGCGTCGAGGATACGGCTTTCATCCGTTAACTGATCGAGGATCGCCTGAATGCGTTTTTCATCCGGCGAGTc < 1:241790/251‑1 (MQ=255) tATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGC‑AATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCCGCAGGTCGCGCACTTCGACG‑CTTTCGCCAGAACGGGCGATAAGCTCGCCTTGTTCGTCATACACGCCCGCGTCGAGGATACGGCTTTCATCCGTTAACTCATCAAGGATCGCCGGCATGCGTTTTTCATCCggcggagcg > 2:68209/1‑244 (MQ=255) gagcgtCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGC‑AATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCTCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGCCAGAACGGGCGATAAGATCGCCTTGTTCGTCATACACGCCCGCGTCGAGGATACGGCTTTCATCCGTTAACTGATCGAGGATCGCCTGAATGCGTTTTTCATCCGGCGAGTCGGTACGCATCa < 1:120471/247‑1 (MQ=255) gcgtCAGGCGCAGATGGCCGAGCGGTCCTGTTTTCCCGGC‑AATTGGTTCGACAATCTGCTGGTGAAAATAGCCGCCCTCTTTTTTACCGGCGAGCGCCAGCCGGTCGCGCTCTTCGACG‑CTTTCGCCAGAACGGGCGATAAGATCGCCTTGTTCGTCATACACGCCCGCGTCGAGGATACGGCTTTCATCCGTTAACTGATCGAGGATCGCCTGAATGCGTTTTTCATCCGGCGAGTCGGTACGCATCAGc < 2:381792/249‑1 (MQ=255) cAGGCGCGGATGGCCCAGGGGTCCGGTTTT‑CCCGCCAAGTGGGCCGACAATCTGCTGGTTAAAATAGCCGCCCGTTTTTTTACCGTGGAGCGCCAGCCGGTCGCGCACTTCGACG‑CGTTCGCCAGAACGGGCTATAAGATCGCCTTGTTCGTCATACACGCCCGCGTCGAGGATACGGCTGTCATCCGTTAACTGATCGAGGATCGCCTGAATGCGTTTTTCATCCGGCGAGTCGGTACGCATCAGCGGTg < 2:287073/251‑1 (MQ=255) ggCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGC‑AATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGCCAGAACGGGCGATAAGATCGCCTTGTTCg < 2:362891/149‑1 (MQ=255) ggCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGC‑AATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGCCAGAACGGGCGATAAGATCGCCTTGTTCg > 1:362891/1‑149 (MQ=255) agctcAGATAGCCGAGCGGGCCGTTTTTCCCGGA‑AATTGGTTCGACAATCGGCTGGTTAAAATAGCCGCCCGCTTTTGTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGCCAGAACGGGCGATAAGATCGCCTTGTTCGTCATACACGCCCGCGGCGAGGATACGGCTTTCATCCGTTAACTGATCGAGGATCGCCTGAATGCGTTTTTCATCCGGCGAGTCGGTACGCATCAGCGGTGCa < 2:99426/247‑1 (MQ=255) cAGATAGCCGAGCGGTCCGTTTTTCCCGGC‑AATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGCCAGAACGGGCGATAAGATCGCCTTGTTCGTCATACACGCCCGCGTCGAGGATACGGCTTTCATCCGTTAACTGATCGAGGATCGCCTGAATGCGTTTTTCATCCGGCGAGTCGGTACGCATCAGCGGTGCa > 1:99426/1‑247 (MQ=255) aGCCGAGCGGTCCGTTTTTCCCGGC‑AATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGCCAGAACGGGCGATAAGATCGCCTTGTTCGTCATACACGCCCGCGTCGAGGATACGGCTTTCATCCGTTAACTGATCGAGGATCGCCTGAATGCGTTTTTCATCCGGCGAGTCGGTACGCATCAGCGGAGCAACGTGCAGc > 2:108130/1‑251 (MQ=255) cGGTCCGTTTTTCCCGGC‑AATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGCCAGAACGGGCGATAAGATCGCCTTGTTCGTCATACACGCCCGCGTCGAGGATACGGCTTTCATCCGTTAACTGATCGAGGATCGCCTGAATGCGTTTTTCATCCGGCGAGTCGGACCGCTTAAGCGGTGCAACGTTCCGCGTTACCt > 2:418253/1‑251 (MQ=255) gTTTTTCCCGGC‑AATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGCCAGAACGGGCGATAAGATCGCCTTGTTCGTCATACACGCCCGCGTCGAGGATACGGCTTTCATCCGTTAACTGATCGAGGATCGCCTGAATGCGTTTTTCATCCGGCGAGTCGGTACGCATCAGCGGTGCAACGTTCAGCGTTACCTGAcgcg < 1:304369/251‑1 (MQ=255) | TTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTGCGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTACA‑CCGATTGCCAGTGAGAGCAGCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGTGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTACCCGC‑AATTGGCTCGACAATCTGCTGGTTAAAATAGCCGCCTGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGCCAGAACGTGCGATAAGATCGCCTTGTTCGTCATACACACCCGCGTCGAGGATACGGCTTTCATCCGTTAACTGATCGAGGATCGCCTGAATGCGTTTTTCATCCGGTGAGTCGGTACGCATCAGCGGTGCAACGTTCAGCGTCACCTGACGCG > NC_000913/4624153‑4624632 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |