| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,624,355 | T→C | T145T (ACA→ACG) | ytjB ← | putative inner membrane protein Smp |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,624,355 | 0 | T | C | 96.4% | 148.4 / ‑2.2 | 57 | T145T (ACA→ACG) | ytjB | putative inner membrane protein Smp |
| Reads supporting (aligned to +/- strand): ref base T (2/0); new base C (28/26); total (31/26) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.94e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.11e-02 | |||||||||||
CTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTGCGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTACA‑CCGATTGCCAGTGAGAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGTGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTACCCGCAATTGGCTCGACAATCTGCTGGTTAAAATAGCCGCCTGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGCCAGAACGTGCGATAAGATCGCCTTGTTCGTCATACACACCCGCGTCGAGGATACGGCTTTCATCCGTTAACTGATCGAGGATCGCCTGAATGCGTTTTTCATCCGGTGAGTCG > NC_000913/4624127‑4624592 | cTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGCTTTCTGCCAGCGGGTACGTTTTCCCTGTTGCAGCGGGCGGGGCAGCACTACG‑CCGATTGCCAGTTAAAGCA‑GCCACATCAGGCGGCAAAAGTTAGTGGTGTTAT‑CCCCCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGGCGGGCGGCAGGCGCAGATAGcccggcg > 2:99725/1‑246 (MQ=255) ttCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCgg < 1:336341/250‑1 (MQ=255) tCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAAACGGAAGGGCGGTTGCTGCCAGCGGGGACGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTACG‑CCGATTGCCAGGGAAAGCA‑GCAACATCAGGCGCAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGGGGGCGTATGGGGGTCGGGGGGCAGGCGCAggtaagcgggcggtg > 1:3854/1‑237 (MQ=255) gtaATGGGTCACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTTACAGGGTGGGCGGTTTCTTCCCCCGGGGACCTTTTCCCTGTAGCAGCGTGCGGGTCCGCCATACG‑CCGGTTGCCCG‑GGGAACAAGCAACATCCGGCGGAAAAAGTTCATGGGGTTAT‑CCACCTGGTGGGGTTCGGTGGGGAGGGTATAGGTGGCGTGCGTCAGgcgccggttacccgacgggcccttttt > 2:159467/1‑228 (MQ=255) gggTCACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGAGTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGtttttcccgg < 1:428319/251‑6 (MQ=255) ttttCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGCAATTggttc < 2:401757/250‑4 (MQ=255) ttttCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGGGCGGGTCAGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGGAAAATGTTAGTGGTGTTAT‑CCACCTGTTTGGCTTCGGTGGCGGGCGTATGGGGGTCGGGCGTCAGGCGCAGATAAACGAGCGGTCCGTTTTTCCCGGCCATTGGTTCg > 1:391370/1‑251 (MQ=255) ctcGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGGACGTTTACCCTGTTGCAGCGTGCGGGTCAGCACTACG‑ACGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCCCCTGTTGGGCTTCGGTGGCGGGCGGATGGGGGTCGGGCGTCCGGCGCAGATAGCCGAGCGGTCCGTTTTTTCCGGCCATTGGTTCGAcc > 1:433673/1‑249 (MQ=255) tcGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTTCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGGGCGGGTCAGCACTACG‑CCGCTTGCCCGTGAAAACA‑GCAACATCCGGCGTAAAATGTTAGTGGTGTTATTCCAC‑TGTTGGGCTTCGGTGGCGGGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGGCCGGTTTTCCCGGCAATTGGTTCGTCAAt > 1:439434/1‑251 (MQ=255) tttCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGGAGGGCCATTGCTGCCAGCGGGTAAGTTTACCCTGTAGCCACGGGCGGGGCCGCCCTACG‑CCCGTTGCCAGTGAAAGCC‑GCAACATCCGGCGGTAAATTTTAGTGGGGTTAT‑CCCCCTGTTGGGGTTCCGTGGCGCGCGGATTGGGGTCGAGCGGCAGGCGCAGGTAACCGCGCGGGCCGttttttccggcccatggtttgcacctctgt > 2:480212/1‑226 (MQ=255) ttcctcttccGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTTCCCTGTAGCCGCGTGCGGGTCAGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGGAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGGGCGTATGGGGGTCGAGCGTCAGGCGCAGATAGCCGGGCGGTCCGTTTTTTCCGGCCATTGGTTCGACAATCTTCTGGt > 1:355266/1‑251 (MQ=255) tcctcttccGGCCCCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGCAATTGGTTCGACAATCTGCTGGt < 2:13241/250‑1 (MQ=255) tcctcttccGGCCCCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGCAATTGGTTCGACAATCTGCTGGt < 2:434238/250‑1 (MQ=255) tcctcttccGGCACCGGTTTGCTGGCGTTTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCTAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGCAATTGGTTCGACAATctgctg < 1:440692/248‑1 (MQ=255) tcctcctccGGCACCGGTTTGCTGGCGGGTAACAGGAAGGGCCATTGCTGCCAGCGGGTACGTTTACGCTGGAGCAGCGTGCGGGTCAGACCTACG‑CCGATTGCCAGTGAAAGCA‑GCAACAGCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTGTTCCCGGCAATTGGTTCGACAATCTGCTgg < 2:166404/249‑1 (MQ=255) tccGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGCAATTGGTTCGACAATCTGCTGGTTAAAAt < 1:78316/250‑1 (MQ=255) ggCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGGACGTTTTCCCTGTAGCAGCGGGCGGGGCAGCCCTACG‑CCGGTTGCCCGTGGAAGCA‑GCAACCTCAGGCGGAAAATGTTAGTGGGGTTAT‑CCACCTGTTGGGCTTCGGTGGCGGGCGTGTGGGGGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCAGCTTTTTCCGGCAATTGGGTCGCCAATCTGCTGGTTAAAATAgcc > 2:241672/1‑251 (MQ=255) cGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTTGCGAGCGTATGTGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGCAATTGGTTCGACAATCTGCTGGTTAAAATAgccgcccg < 1:285257/251‑3 (MQ=255) gTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGGACGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTAAG‑CCGATTGCCCGTGTAAGAA‑GCCACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTTGGGGGCGGGCGTATGGGTGTCGGGCGTCAGGCGCAGGTAGCCGAGAGGTCCGTTTTTCCCGGCAATTGGTTCGCCAAATTGCTGGTTAAACTAcccgcccgcc > 1:437045/1‑247 (MQ=255) ggTTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATCGCCGAGCGGTCCGTTTTTCCCGGCAATTGGTTCGACAATCTGCTGGTTAAAATATCCGCCCGCTTTTTTACCGt > 2:482843/1‑251 (MQ=255) gATTGCTGCCAGCGGGTACGTTTACCCTTTAGCAGCGTTCGGGTCAGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGGGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGCAATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTc < 2:355266/251‑1 (MQ=255) gATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGCAATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTc > 1:165367/1‑251 (MQ=255) gATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGCAATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTc < 1:109060/251‑1 (MQ=255) aTTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGtttttcccg > 1:202075/1‑178 (MQ=255) aTTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGCAATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTcg > 1:261567/1‑251 (MQ=255) aTTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGGGCGGGTCAGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGtttttcccg < 2:202075/182‑5 (MQ=255) ctgcCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCGGGCGCAGATAGCCGATCGGTCCGTTTTTCCCGGCAATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTCgcgc > 1:424883/1‑250 (MQ=255) gggTCCGTTTCCCCTGTAGCAGCGTGCGGGGCAGCACT‑CAGCCGATCGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGGCGAGCGTCAGGCGCAGATATCCGAGCGGTCCGTTTTTCCCGGCAATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGGCGCGCACTTCGACg < 2:179621/251‑1 (MQ=255) tACCCTGTAGCAGCGTGCGGGTCAGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGgc < 2:177587/132‑1 (MQ=255) tACCCTGTAGCAGCGTGCGGGTCAGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGgc > 1:177587/1‑132 (MQ=255) aCCCTGTAGCAGCGTGCGGGTCAGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGCAATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGcc > 1:68296/1‑249 (MQ=255) agcagcGTGCGGGTCAGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGCAATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGCCAGAACgggc < 1:66029/251‑4 (MQ=255) cagcGTGCGGGTCAGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGCAATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGCCAGAACGGGCg > 2:140155/1‑250 (MQ=255) cGTGCGGGTCAGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGCAATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGCCAGAACGGGCGATaa < 2:391370/251‑1 (MQ=255) cAGCACTACA‑CCGATTGCCAGTGAGAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGTGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTACCCGCAATTGGCTCGACAATCTGCTGGTTAAAATAGCCGCCTGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGCCAGAACGTGCGATAAGATCGCCtt > 1:237649/1‑251 (MQ=255) tacgccGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGCAATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCttttttcc > 2:360671/5‑180 (MQ=255) tacgccGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGCAATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTAc < 1:360671/178‑1 (MQ=255) acgccGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGCAATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGGCGCGCACTTCGACG‑CTTTCGCCAGAACGGGCGATAAGATCGCCTTGTTCGTc > 2:439504/4‑251 (MQ=255) gaaagca‑gcAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTAGGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGCAATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTGTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGCCAGAACGGGCGATAAGATCGCCTTGTTCGTCATACACGCCCGCGTc < 1:47798/248‑1 (MQ=255) aaggca‑gcaACATCAGGCGAAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGACTTCGGAGGCGAGCGTATTGGAGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGATTTTCCCGGCAATTAGTTCGACAATCTGCTGGTTAAAATATCCACCCGCGTTTTTACCGTCGATCGCCACCCGGTCGCGCACTTCG‑CGACTTTCGCCCGAGCGGGCGATAAGATCACCTTGtacgaaataccagcccgactcg > 2:72363/4‑230 (MQ=255) gcaACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGCAATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGCCAGAACGGGCGATAAGATCGCCTTGTTCGTCATACACGCCCGCGTCGCGGAt > 1:358684/1‑250 (MQ=255) cATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTAGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGCAATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGCCAGAACGGGCGATAAGATCGCCTTGTTCGTCATACACGCCCGCGTCGAGGATACGGc > 1:35358/1‑251 (MQ=255) cAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGCAATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGCCAGAACGGGCGATAAGATCGCCTTGTTCGTCATACACGCCCGCGTCGAGGATACGGCttt < 1:391751/251‑1 (MQ=255) gTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGCAATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGCCAGAACGGGCGATAAGATCGCCTTGTTCGTCATACACGCCCGCGTCGAGGATACGGCTTTCATcc > 1:341866/1‑251 (MQ=255) gTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGCAATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGTCAGAACGGGCGATAAGATCGCTTTGTTCGTCATACACGCCCGCGTCGAGGATACGGCTTTCATCCGTTAAc < 1:406633/250‑1 (MQ=255) ggggtgTTAT‑CCGCCTGTTGGGCTTCGGTGGCGGGCGTTTGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGTTCCGTTTTCCCCGGCAATTGGTTCGACAACCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGCCAGAACGGGCGATAAGATCGCCTTGTTCGTCATACACGCCCGCGTCGAGGATACGGCTTTCATCCGTTAACTGATc < 2:261567/249‑1 (MQ=255) tAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGCAATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGCCAGAACGGGCGATAAGATCGCCTTGTTCGTCATACACGCCCGCGTCGAGGATACGGCTTTCATCCGTTAACTGATCGAGGAt < 1:480212/250‑1 (MQ=255) tAT‑CCACCGGTTGGGCTCCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGCAATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCCCTTCGACG‑CTTTCGCCAGAACGGGCGATAAGATCGCCTTGTTCGTCATACACGCCCGCGTCGAGGATACGGCTTTCATCCGTTAACTGATCGAGGAt < 2:165367/250‑1 (MQ=255) gTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGCAATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTT‑ACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGCCAGAACGGGCGATAAGATCGCCTTGTTCGTCATACACGCCCGCGTCGAGGATACGGCTTTCATCCGTTAACTGATCGAGGATCGCCTGAAt < 1:99725/249‑1 (MQ=255) ggCTTCGGTGGCGAGCGTATGGGTGTCGAGTGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTACCCGCAATTGGCTCGACAATCTGCTGGTTAAAATAGCCGCCTGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGCCAGAACGTGCGATAAGATCGCCTTGTTCGTCATACACACCCGCGTCGAGGATACGGCTTTCATCCGTTAACTGATCGAGGATCGCCTGAATGCGtt > 1:47189/1‑251 (MQ=255) cTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGCAATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGCCAGAACGGGCGATAAGATCGCCTTGTTCGTCATACACGCCCGCGTCGAGGATACGGCTTTCATCCGTTAACTGATCGAGGATCGCCTGAATGCGtttt > 1:481573/1‑251 (MQ=255) tGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGCAATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGCCAGAACGGGCGATAAGATCGCCTTGTTCGTCATACACGCCCGCGTCGAGGATACGGCTTTCATCCGTTAACTGATCGAGGATCGCCTGAATGCGTTTTTCATcc > 2:129227/1‑251 (MQ=255) cGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGCAATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCCCTTCGACG‑CTTTCGCCAGAACGGGCGATAAGATCGCCTTGTTCGTCATACACGCCCGCGTCGAGGCTCCGGCTTTCATCCGTTCACTGATCGAGGATCGGCTGGATGCgatgttaatcccgc > 2:365576/1‑238 (MQ=255) cGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGCAATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGCCAGAACGGGCGATAAGATCGcc > 2:310494/1‑166 (MQ=255) cGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGCAATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGCCAGAACGGGCGATAAGATCGcc < 1:310494/166‑1 (MQ=255) gTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGCAATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGCCAGAACGGGCGATAAGATCGCCTTGTTCGTCATACACGCCCGCGTCGAGGATACGGCTTTCATCCGTTAACTGATCGAGGATCGCCTGAATGCGTTTTTCATCCGGCGAGTc < 1:241790/251‑1 (MQ=255) tATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGCAATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCCGCAGGTCGCGCACTTCGACG‑CTTTCGCCAGAACGGGCGATAAGCTCGCCTTGTTCGTCATACACGCCCGCGTCGAGGATACGGCTTTCATCCGTTAACTCATCAAGGATCGCCGGCATGCGTTTTTCATCCggcggagcg > 2:68209/1‑244 (MQ=255) | CTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTGCGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTACA‑CCGATTGCCAGTGAGAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCTGTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGTGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTACCCGCAATTGGCTCGACAATCTGCTGGTTAAAATAGCCGCCTGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG‑CTTTCGCCAGAACGTGCGATAAGATCGCCTTGTTCGTCATACACACCCGCGTCGAGGATACGGCTTTCATCCGTTAACTGATCGAGGATCGCCTGAATGCGTTTTTCATCCGGTGAGTCG > NC_000913/4624127‑4624592 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |