| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,624,226 | G→A | R188R (CGC→CGT) | ytjB ← | putative inner membrane protein Smp |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,624,226 | 0 | G | A | 98.2% | 160.8 / NA | 54 | R188R (CGC→CGT) | ytjB | putative inner membrane protein Smp |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (22/31); minor base C (0/1); total (22/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.89e-01 | |||||||||||
GTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTG‑GACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTGCGTTTACCCTGTAGCAGCGTGCGGGTC‑AGCACTACA‑CCGATTGCCAGTGAGAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCT‑GTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGTGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTACCCGCAATTGGCTCGACAATCTGCTGGTTAAAATAGCCGCCTGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG > NC_000913/4623992‑4624472 | gtCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATCTGGCGAAAAATACACTCCTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTG‑GACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTagc < 1:393212/250‑1 (MQ=255) tCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCACCTGGCGAAAAATACACTCCTCCACCGCCAGGTTAAACCAAGGGTCGTAAGAGTCAGAGTTGGGCAGGCGTAATGTG‑GACATAACGATTTCCTTTCTTGGAGTAATGGGTCACTATTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAAACGGATGGGCGATTGCGGCCCCCGGGTACGTTTATCCtttggca > 2:116975/1‑244 (MQ=255) gagcCAGAGAACCAGAACGCGCTGCGTGGCGGGGTTCTGGCGAAAAATACACCCCTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTG‑GACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTGGTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCggg < 2:468380/249‑1 (MQ=255) gaAACAGAACGCGCGGCGTGGCGGGCATCTGGCGAAAAATACACTCCTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTG‑GACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTC‑AGCACt < 2:129932/251‑1 (MQ=255) ggCGGGCATCTGGCGAAAAATACACTCCTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTG‑GACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTC‑AGCACTACG‑CCGATTGCCAGTgaaa < 1:199888/251‑3 (MQ=255) cGGGCATCTGGCGAAAAATACACTCCTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTG‑GACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTC‑AGCACTACG‑CCGATTGCCAGTGAAagc > 1:132392/1‑251 (MQ=255) catctGGCGAAAAATACACTCCTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTG‑GACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTC‑AGCACTACG‑CCGATTGCCAGTGAAAgca‑gca < 1:246360/247‑1 (MQ=255) aaaTACACTCCTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTG‑GACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTC‑AGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGt < 1:422683/251‑1 (MQ=255) aTACACTCCCCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTG‑GACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCGCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTC‑AGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTaa < 2:421456/251‑1 (MQ=255) ccACCGCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTG‑GACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTC‑AGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAg < 2:205130/249‑1 (MQ=255) ccGCCAGGTTAAACCACGGGGCGTAAGAGTCAGAGATGAGCAGGCGTAATGTG‑GACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTC‑AGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAgtggtg < 2:383654/251‑1 (MQ=255) gCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTG‑GACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTC‑AGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGtt < 1:300162/251‑1 (MQ=255) aGGTTAAACCACGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTG‑GACATAACGATTTCCTTTCTTGTAGGAATGGGTCACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTC‑AGCACTACG‑CCGATTGCCAGTGAAagc < 2:138625/216‑1 (MQ=255) gTTAAACCTCGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTG‑GACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTGTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTC‑AGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCa < 2:402575/251‑1 (MQ=255) gTTAAACCACGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTG‑GACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTC‑AGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCa < 1:54817/251‑1 (MQ=255) gTTAAACCACGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTG‑GACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAAAAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTC‑AGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGGGTTAT‑ccc > 1:401757/1‑250 (MQ=255) aaaCCACTGGTCGTAAGAGTCCGAGATGAGCATGCGTAATGTG‑GACATAACGATTTCCTTTCTTGTATTAATGGGTCACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTC‑AGCACTTCG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCAcc < 2:286856/250‑1 (MQ=255) aaaCCACGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTG‑GACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGGACGGTTACCCTGTAGCAGCGTGCGGGGC‑AACACTACG‑CCGATTGGCAGTGGAAGCA‑GCCACATACGGCGTAAAATGTTAatgggggttatacccc > 1:381792/1‑239 (MQ=255) cACGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTG‑GACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTC‑AGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCT‑GTTg < 1:403658/251‑1 (MQ=255) cACGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTG‑GACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTC‑AGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCT‑GTTg < 1:253141/251‑1 (MQ=255) gggTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTG‑GCCATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAAAAAGAAGGGCGATTACGGCCCGCGGGGACGGTTTCCCTGTCGCCGAGTGGGGGTCCGGCAC‑ACC‑ACGATTGTCAGTGAAAGCC‑ACAAACTCAGGGGTAAAATATTATTGGTTTTAT‑CCACCTTGTTggg > 2:227361/1‑251 (MQ=255) gTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTG‑GACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTC‑AGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCT‑GTTGGGCtt < 2:201684/251‑1 (MQ=255) gagTCAGAGATGAGCAGGCGTAATGTG‑GACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGGAGGGCGATTGCTGCCCGCGGGGACGTTTACCCTGTAGCAGCGGGCGGGGC‑CGCACTACG‑CCGGTTGCCAGTGAAAACA‑GCAACCTCAGGCGTAAAATGTTAGTGGGGTTAT‑CCACCT‑GTTGGGCTTCGGTggg > 1:117005/1‑250 (MQ=255) aGCAGGCGTAAT‑TGTGACATAACGATTTCCTTTCTTGTAGTAATGGGTCTCTCTTTTTTCGCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTC‑AGCACTACG‑CCGATTGCCAGTGAAAGCT‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCT‑GTTGGGCTTCGGTGGCGAGCGTATGGgt < 1:314818/251‑1 (MQ=255) aTGTG‑GACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTa < 2:368931/125‑1 (MQ=255) aTGTG‑GACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGGACGTTTa > 1:368931/1‑125 (MQ=255) cTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGCTTTCTGCCAGCGGGTACGTTTTCCCTGTTGCAGCGGGCGGGGC‑AGCACTACG‑CCGATTGCCAGTTAAAGCA‑GCCACATCAGGCGGCAAAAGTTAGTGGTGTTAT‑CCCCCT‑GTTGGGCTTCGGTGGCGAGCGTATGGGTGGCGGGCGGCAGGCGCAGATAGcccggcg > 2:99725/1‑246 (MQ=255) ttCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTC‑AGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCT‑GTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCgg < 1:336341/250‑1 (MQ=255) tCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAAACGGAAGGGCGGTTGCTGCCAGCGGGGACGTTTACCCTGTAGCAGCGTGCGGGTC‑AGCACTACG‑CCGATTGCCAGGGAAAGCA‑GCAACATCAGGCGCAAAATGTTAGTGGTGTTAT‑CCACCT‑GTTGGGCTTCGGTGGGGGGCGTATGGGGGTCGGGGGGCAGGCGCAggtaagcgggcggtg > 1:3854/1‑237 (MQ=255) gtaATGGGTCACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTTACAGGGTGGGCGGTTTCTTCCCCCGGGGACCTTTTCCCTGTAGCAGCGTGCGGGTC‑CGCCATACG‑CCGGTTGCCCG‑GGGAACAAGCAACATCCGGCGGAAAAAGTTCATGGGGTTAT‑CCACCT‑GGTGGGGTTCGGTGGGGAGGGTATAGGTGGCGTGCGTCAGgcgccggttacccgacgggcccttttt > 2:159467/1‑228 (MQ=255) gggTCACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGAGTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTC‑AGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCT‑GTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGtttttcccgg < 1:428319/251‑6 (MQ=255) ttttCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTC‑AGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCT‑GTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGCAATTggttc < 2:401757/250‑4 (MQ=255) ttttCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGGGCGGGTC‑AGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGGAAAATGTTAGTGGTGTTAT‑CCACCT‑GTTTGGCTTCGGTGGCGGGCGTATGGGGGTCGGGCGTCAGGCGCAGATAAACGAGCGGTCCGTTTTTCCCGGCCATTGGTTCg > 1:391370/1‑251 (MQ=255) ctcGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGGACGTTTACCCTGTTGCAGCGTGCGGGTC‑AGCACTACG‑ACGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCCCCT‑GTTGGGCTTCGGTGGCGGGCGGATGGGGGTCGGGCGTCCGGCGCAGATAGCCGAGCGGTCCGTTTTTTCCGGCCATTGGTTCGAcc > 1:433673/1‑249 (MQ=255) tcGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTTCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGGGCGGGTC‑AGCACTACG‑CCGCTTGCCCGTGAAAACA‑GCAACATCCGGCGTAAAATGTTAGTGGTGTTATTCCAC‑T‑GTTGGGCTTCGGTGGCGGGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGGCCGGTTTTCCCGGCAATTGGTTCGTCAAt > 1:439434/1‑251 (MQ=255) tttCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGGAGGGCCATTGCTGCCAGCGGGTAAGTTTACCCTGTAGCCACGGGCGGGGC‑CGCCCTACG‑CCCGTTGCCAGTGAAAGCC‑GCAACATCCGGCGGTAAATTTTAGTGGGGTTAT‑CCCCCT‑GTTGGGGTTCCGTGGCGCGCGGATTGGGGTCGAGCGGCAGGCGCAGGTAACCGCGCGGGCCGttttttccggcccatggtttgcacctctgt > 2:480212/1‑226 (MQ=255) ttcctcttccGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTTCCCTGTAGCCGCGTGCGGGTC‑AGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGGAAAATGTTAGTGGTGTTAT‑CCACCT‑GTTGGGCTTCGGTGGCGGGCGTATGGGGGTCGAGCGTCAGGCGCAGATAGCCGGGCGGTCCGTTTTTTCCGGCCATTGGTTCGACAATCTTCTGGt > 1:355266/1‑251 (MQ=255) tcctcttccGGCCCCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTC‑AGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCT‑GTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGCAATTGGTTCGACAATCTGCTGGt < 2:13241/250‑1 (MQ=255) tcctcttccGGCCCCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTC‑AGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCT‑GTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGCAATTGGTTCGACAATCTGCTGGt < 2:434238/250‑1 (MQ=255) tcctcttccGGCACCGGTTTGCTGGCGTTTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTC‑AGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCT‑GTTGGGCTTCGGTGGCTAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGCAATTGGTTCGACAATctgctg < 1:440692/248‑1 (MQ=255) tcctcctccGGCACCGGTTTGCTGGCGGGTAACAGGAAGGGCCATTGCTGCCAGCGGGTACGTTTACGCTGGAGCAGCGTGCGGGTC‑AGACCTACG‑CCGATTGCCAGTGAAAGCA‑GCAACAGCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCT‑GTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTGTTCCCGGCAATTGGTTCGACAATCTGCTgg < 2:166404/249‑1 (MQ=255) tccGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTC‑AGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCT‑GTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGCAATTGGTTCGACAATCTGCTGGTTAAAAt < 1:78316/250‑1 (MQ=255) ggCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGGACGTTTTCCCTGTAGCAGCGGGCGGGGC‑AGCCCTACG‑CCGGTTGCCCGTGGAAGCA‑GCAACCTCAGGCGGAAAATGTTAGTGGGGTTAT‑CCACCT‑GTTGGGCTTCGGTGGCGGGCGTGTGGGGGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCAGCTTTTTCCGGCAATTGGGTCGCCAATCTGCTGGTTAAAATAgcc > 2:241672/1‑251 (MQ=255) cGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTC‑AGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCT‑GTTGGGCTTCGGTTGCGAGCGTATGTGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGCAATTGGTTCGACAATCTGCTGGTTAAAATAgccgcccg < 1:285257/251‑3 (MQ=255) gTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGGACGTTTACCCTGTAGCAGCGTGCGGGTC‑AGCACTAAG‑CCGATTGCCCGTGTAAGAA‑GCCACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCT‑GTTGGGCTTTGGGGGCGGGCGTATGGGTGTCGGGCGTCAGGCGCAGGTAGCCGAGAGGTCCGTTTTTCCCGGCAATTGGTTCGCCAAATTGCTGGTTAAACTAcccgcccgcc > 1:437045/1‑247 (MQ=255) ggTTAACAGGAAGGGCGATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTC‑AGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCT‑GTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATCGCCGAGCGGTCCGTTTTTCCCGGCAATTGGTTCGACAATCTGCTGGTTAAAATATCCGCCCGCTTTTTTACCGt > 2:482843/1‑251 (MQ=255) gATTGCTGCCAGCGGGTACGTTTACCCTTTAGCAGCGTTCGGGTC‑AGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCT‑GTTGGGCTTCGGTGGCGAGCGTATGGGGGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGCAATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTc < 2:355266/251‑1 (MQ=255) gATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTC‑AGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCT‑GTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGCAATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTc < 1:109060/251‑1 (MQ=255) gATTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTC‑AGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCT‑GTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGCAATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTc > 1:165367/1‑251 (MQ=255) aTTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTC‑AGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCT‑GTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGtttttcccg > 1:202075/1‑178 (MQ=255) aTTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTC‑AGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCT‑GTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTCCCGGCAATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTcg > 1:261567/1‑251 (MQ=255) aTTGCTGCCAGCGGGTACGTTTACCCTGTAGCAGCGGGCGGGTC‑AGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCT‑GTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCAGGCGCAGATAGCCGAGCGGTCCGtttttcccg < 2:202075/182‑5 (MQ=255) ctgcCAGCGGGTACGTTTACCCTGTAGCAGCGTGCGGGTC‑AGCACTACG‑CCGATTGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCT‑GTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGCGTCGGGCGCAGATAGCCGATCGGTCCGTTTTTCCCGGCAATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGTCgcgc > 1:424883/1‑250 (MQ=255) gggTCCGTTTCCCCTGTAGCAGCGTGCGGGGC‑AGCACT‑CAGCCGATCGCCAGTGAAAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCT‑GTTGGGCTTCGGTGGCGAGCGTATGGGTGGCGAGCGTCAGGCGCAGATATCCGAGCGGTCCGTTTTTCCCGGCAATTGGTTCGACAATCTGCTGGTTAAAATAGCCGCCCGCTTTTTTACCGTCGAGCGCCAGCCGGGCGCGCACTTCGACg < 2:179621/251‑1 (MQ=255) | GTCGGCATTGCGCCAGAGAAACAGAACGCGCTGCGTGGCGGGCATTTGGCGAAAAATACACTCTTCCACCGCCAGGTTAAACCACGGGTCGTAAGAGTCAGAGATGAGCAGGCGTAATGTG‑GACATAACGATTTCCTTTCTTGTAGTAATGGGTCACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTGCGTTTACCCTGTAGCAGCGTGCGGGTC‑AGCACTACA‑CCGATTGCCAGTGAGAGCA‑GCAACATCAGGCGTAAAATGTTAGTGGTGTTAT‑CCACCT‑GTTGGGCTTCGGTGGCGAGCGTATGGGTGTCGAGTGTCAGGCGCAGATAGCCGAGCGGTCCGTTTTTACCCGCAATTGGCTCGACAATCTGCTGGTTAAAATAGCCGCCTGCTTTTTTACCGTCGAGCGCCAGCCGGTCGCGCACTTCGACG > NC_000913/4623992‑4624472 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |