| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,618,489 | C→T | T87T (ACC→ACT) | deoA → | thymidine phosphorylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,618,489 | 0 | C | T | 98.1% | 162.7 / NA | 52 | T87T (ACC→ACT) | deoA | thymidine phosphorylase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (27/24); minor base G (0/1); total (27/25) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.81e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GAAATTATTCGTAAAAAACGTGATGGTCATGCGCTGAGCGATGAAGAAATTCGTTTCTTTATCAACGGTATTCGCGACAACACTATCTCCGAAGGGCAGATTGCCGCCCTCGCGATGACCATTTTCTTCCACGATATGACAATGCCTGAGCGTGTCTCGCTGACCATGGCGATGCGAGATTCAGGAACCGTTCTCGACTGGAAAAGCCTGCATCTGAATGGCCCGATTGTTGATAAACACTCCACCGGTGGCGTCGGCGATGTGACTTCGCTGATGTTGGGGCCGATGGTCGCAGCCTGCGGCGGCTATATTCCGATGATCTCTGGTCGCGGCCTCGGTCATACTGGCGG‑TACGCTCGACAAACTGGAATCC‑ATCCCTGGCTTCGAC‑A‑TTTTCCCGGATGACAACCGTTTCCGCGAAATTATTAAAGACGTCGGCGTGGCG‑ATTATCGGTCAGACCAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCG > NC_000913/4618244‑4618735 | gAAATTATTCGTAAAAAACGTGATGGTCATGCACTGAGCGATGAAGAAATTCGTTTCTTTATCAACGGCATTCGCGACAACACTATCTCCGAAGGGCAGATTGCCGCCCTCGCGATGACCATTTTCTTCCACGATATGACAATGCCTGAGCGTGTCTCGCTGACCATGGCGATGCGAGATTCAGGAACCGTTCTCGACTGGAAAAGCCTGCATCTGAATGGCCCGATTGTTGATAAACATTCCACtggtgg < 1:311109/251‑1 (MQ=255) tCGTAAAAAACGTGATGGTCATGCACTGAGCGATGAAGAAATTCGTTTCTTTATCAACGGCATTCGCGACAACACTATCTCCGAAGGGCAGATTGCCGCCCTCGCGATGACCATTTTCTTCCACGATATGACAATGCCTGAGCGTGTCTCGCTGACCATGGCGATGCGAGATTCAGGAACCGTTCTCGACTGGAAAAGCCTGCATCTGAATGGCCCGATTGTTGATAAACATTCCACTGGTGGCGTCGGCg > 1:409343/1‑251 (MQ=255) aaaaaaCGTGATGGTCATGCACTGAGCGATGAAGAAATTCGTTTCTTTATCAACGGCATTCGCGACAACACTATCTCCGAAGGGCAGATTGCCGCCCTCGCGATGACCATTTTCTTCCACGATATGACAATGCCTGAGCGTGTCTCGCTGACCATGGCGATGCGAGACTCAGGAACCGTTCTCGCCTGGAAAAGCCTGCATCTGAATGGCCCGCTTGTTGATAAACATTCCACTGGTGGCGTGGGCGAtgg > 1:379735/1‑250 (MQ=255) aaaaCGTGATGGTCATGCACTGAGCGATGAAGAAATTCGTTTCTTTATCAACGGCATTCGCGACAACACTATCTCCGAAGGGCAGATTGCCGCCCTCGCGATGACCATTTTCTTCCACGATATGACAATGCCTGAGCGTGTCTCGCTGACCATGGCGATGCGAGATTCAGGAACCGTTCTCGACTGGAAAAGCCTGCATCTGAATGGCCCGATTGTTGATAAACATTCCACTGGTGGCGTCGGCGAtgtg > 1:290734/1‑250 (MQ=255) cATGCACTGAGCGATGAAGAAATTCGTTTCTTTATCAACGGCATTCGCGACAACACTATCTCCGAAGGGCAGATTGCCGCCCTCGCGATGACCATTTTCTTCCACGATATGACAATGCCTGAGCGTGTCTCGCTGACCATGGCGATGCGAGATTCAGGAACCGTTCTCGACTGGAAAAGCCTGCATCTGAATGGCCCGATTGTTGATAAACATTCCACTGGTGGCGTCGGCGATGTGACTTCGCTGATGtt > 1:193234/1‑251 (MQ=255) gctcggAGCGATGAAGAAATTCGTTTCTTTATCAACGGCACTCGCGACAACACTATCTCCGAAGGGCAGATTGCCGCCCTCGCGATGACCATTTTCTTCCACGATATGACAATGCCTGAGCGTGTCTCGCTGACCATGGCGATGCGAGATTCAGGAACCGTTCTCGACTGGAAAAGCCTGCATCTGAATGGCCCGATTGGTGATAAACATTCCACTGGTGGCGTCGGCGATGTGACTTCGCTGATGTTgg < 2:346753/245‑1 (MQ=255) tGAGCGCTGAAGAAATTAGTTACTTTATCTACGGCATTAGCGACAACACTATCTCAGAAGGGCAGATTGCCGCCCTCGCGATGCCCATTTTCTTACACGATATGACAATGCCTGAGCGTGTCTCGCTGACCATGGCTATGCGAGCTTCAGGAACCGTTCTCGACTGGAAAAGCCTGAATCTGAATGGCCCGATTGTTGATAAACATTACCCTGGAGGCGTGGGCGATATGACTTCGCAGTTGTTggagc > 2:284241/1‑246 (MQ=255) agaaATTCGTTTCTTTATCAACGGCATTCGCGACAACACTATCTCCGAAGGGCAGATTGCCGCCCTCGCGATGACCATTTTCTTCCACGATATGACAATGCCTGAGCGTGTCTCGCTGACCATGGCGATGCGAGATTCAGGAACCGTTCTCGACTGGAAAAGCCTGCATCTGAATGGCCCGATTGTTGATAAACATTCCACTGGTGGCGTCGGCGATGTGACTTCGCTGATGTTGGGGCCGATGGTCGCAg < 1:416897/251‑1 (MQ=255) aaaTTCGTTTCTTTAACAACGGCATTCGCGACAACACTATCTCCGAAGGGCAGATTGCCGCCCTCGCGATGACCATTTTCTTCCACGATATGACAATGCCTGAGCGTGTCTCGCTGACCATGGCGATGCGAGATTCAGGAACCGTTCTCGACTGGAAAAGCCTGCATCTGAATGGCCCGATTGTTGATAAACATTCCACTGGTGGCGTCGGCGATGTGACTTCGCTGATGTTGGGGCCGATGGTCGCAGcc < 1:433874/251‑1 (MQ=255) ttCTTTATCAACGGCATTCGCGACAACACTATCTCCGAAGGGCAGATTGCCGCCCTCGCGATGACCATTTTCTTCCACGATATGACAATGCCTGAGCGTGTCTCGCTGACCATGGCGATGCGAGATTCAGGAACCGTTCTCGACTGGAAAAGCCTGCATCTGAATGGCCCGATTGTTGATAAACATTCCACTGGCGGCGTCGGCGATGTGACTTCGCTGATGTTGGGGCCGATGGTCGCAGCCTGcggcgg > 2:424468/1‑251 (MQ=255) tCTTTATCAACGGCATTCGCGACAACACTATCTCCGACGGGCAGATTGCCGCCCTCGCGATGACCATTTTCTTCCACGATATGACAATGCCTGAGCGTGTCTCGCTGACCATGGCGATGCGAGATTCAGGAACCGTTCTCGACTGGAAAAGCCTGCATCTGAATGGCCCGATTGTTGCTAAACATTCCACTGGTGGCGTCGGCGATGTGACTTCGCTGATGTTGGGGCCGATGGTCGCAGCCTGCggcggc > 2:66913/1‑251 (MQ=255) tttATCAACGGCATTCGCGACAACACTATCTCCGAAGGGCAGATTGCCGCCCTCGCGATGACCATTTTCTTCCACGATATGACAATGCCTGAGCGTGTCTCGCTGACCATGGCGATGCGAGATTCAGGAACCGTTCTCGACTGGAAAAGCCTGCATCTGAATGGCCCGATTGTTGATAAACATTCCACTGGTGGCGTCGGCGATGTGACTTCGCTGATGTTGGGGCCGATGGTCGCAGCCTGcggcgggc > 2:365809/1‑248 (MQ=255) aaCGGCATTCGCGACAACACTATCTCCGAAGGGCAGATTGCCGCCCTCGCGATGACCATTTTCTTCCACGATATGACAATGCCTGAGCGTGTCTCGCTGACCATGGCGATGCGAGATTCAGGAACCGTTCTCGACTGGAAAAGCCTGCATCTGAATGGCCCGATTGTTGATAAACATTCCACTGGTGGCGTCGGCGATGTGCCTTCGATGATGTTGGGGCCGATGGTCGCAGCCTGCGGCGGCTATATTcc > 1:468739/1‑251 (MQ=255) aaCGGCATTCGCGAAAACACTATCTCCGAAGGGCAGATTGCCGCCCTCGCGATGACCATTTTCTTCCACGATATGACAATGCCTGAGCGTGTCTCGCTGACCATGGCGATGCGAGATTCAGGAACCGTTCTCGACTGGAAAAGCCTGCATCTGAATGGCCCGATTGTTGATAAACATTCCACTGGTGGCGTCGGCGATGTGACTTCGCTGATGTTGGGGCCGATGGTCGCAGCCTGCGGCGGCTATATTcc < 1:246726/251‑1 (MQ=255) gACAACACTATCTCCGAAGGGCAGATTGCCGCCCTCGCGATGACCATTTTCTTCCACGATATGACAATGCCTGAGCGTGTCTCGCTGACCATGGCGATGCGAGATTCAGGAACCGTTCTCGACTGGAAAAGCCTGCATCTGAATGGCCCGATTGTTGATAAACATTCCACTGGTGGCGTCGGCGATGTGACTTCGCTGATGTTGGGGCCGATGGTCGCAGCCTGCGGCGGCTATATTCCGATGTTCTCTgg > 1:389216/1‑251 (MQ=255) acaacaCTATCTCCGAAGGGCAGATTGCCGCCCTCGCGATGACCATTTTCTTCCACGATATGACAATGCCTGAGCGTGTCTCGCTGACCATGGCGATGCGAGATTCAGGAACCGTTCTCGACTGGAAAAGCCTGCATCTGAATGGCCCGATTGTTGATAAACATTCCACTGGTGGCGTCGGCGATGTGACTTCGCTGATGTTGGGGCCGGTGGTCGCAGCCTGCGGCGGCCATATTCCgcttgtttctggg > 2:51560/1‑239 (MQ=255) cacTATCTCCGAAGGGCAGATTGCCGCCCTCGCGATGACCATTTTCTTCCACGATATGACAATGCCTGAGCGTGTCTCGCTGACCATGGCGATGCGAGATTCAGGAACCGTTCTCGACTGGAAAAGCCTGCATCTGAATGGCCCGATTGTTGATAAACATTCCACTGGTGGCGTCGGCGATGTGACTTCGCTGATGTTGGGGCCGATGGTCGCAGCCTGCGGCGGCTATATTCCGATGATCTCTGGTcgcg > 1:390536/1‑251 (MQ=255) ccGAAGGGCAGATTGCCGCCCTCGCGATGACCATTTTCTTCCACGATATGACAATGCCTGAGCGTGTCTCGCTGACCATGGCGATGCGAGATTCAGGAACCGTTCTCGACTGGAAAAGCCTGCATCTGAATGGCCCGATTGTTGATAAACATTCCACTGGTGGCGTCGGCGATGTGACTTCGCTGATGTTGGGGCCGATGGTCGCAGCCTGCGGCGGCTATATTCCGATGATCTCTGGTCGCGGCCTc < 1:418127/248‑1 (MQ=255) cGAAGGGCAGATTGCCGCCCTCGCGATGACCATTTTCTTCCACGATATGACAATGCCTGAGCGTGTCTCGCTGACCATGGCGATGCGAGATTCAGGACCCGTTCTCGCCTGGAAAAGCCTGCATCTGAATGGCCCGATTGTTGATAAACATTCCACTGGTGGCGTCGGCGATGTGACTTCGCTGATGTTGGGGCCGATGGACGCAGGCTGCGGCGGCTATATTCCGATGGTCACTGGTCGCGGCCCCGGTc > 2:279764/1‑251 (MQ=255) cGAAGGGCAGATTGCCGCCCTCGCGATGACCATTTTCTTCCACGATATGACAATGCCTGAGCGTGTCTCGCTGACCATGGCGATGCGAGATTCAGGAACCGTTCTCGACTGGAAAAGCCTGCATCTGAATGGCCCGATTGTTGATAAACATTCCACTGGTGGCGTCGGCGATGTGACTTCGCTGATGTTGGGGCCGATGGTCGCAGCCTGCGGCGGCTATATTCAGATGATCGCTGGGCGCGGCCTCGGt > 2:406816/1‑250 (MQ=255) gCAGATTGCCGCCCTCGCGATGACCATTTTCTTCCACGATATGACAATGCCTGAGCGTGTCTCGCTGACCATGGCGATGCGAGATTCAGGAACCGTTCTCGACTGGAAAAGCCTGCATCTGAATGGCCCGATTGTTGATAAACATTCCACTGGTGGCGTCGGCGATGTGACTTCGCTGATGTTGGGGCCGATGGTCGCAGCCTGCGGCGGCTATATTCCGATGATCTCTGGTCGCGGCCTCGGTCATACTg < 2:193234/251‑1 (MQ=255) cgATGACCATTTTCTTCCCCGATATGACAATGCCTGAGCGGGTCTCGCTGACCAGGGCGATGCGAGATTCAGGAACCGTTCTCGACTGGAAAAGCCTGCATCTGAATGGCCCGATTGTTGATAAACATTCCACTGGTGGCGTCGGCGATGTGACTTCGCTGATGTTGGGGCCGATGGTCGCAGCCTGCGGCGGCTATATTCCGATGATCTCTGGTCGCGGCCTCGGTCATACTGGCGG‑TACGCTCGACaaa < 2:390536/251‑1 (MQ=255) gATGACCATTTTCTTCCACGATATGACAATGCCTGAGCGTGTCTCGCTGACCATGGCGATGCGAGATTCAGGAACCGTTCTCGACTGGAAAAGCCTGCATCTGAATGGCCCGATTGTTGATAAACATTCCACTGGTGGCGTCGGCGATGTGACTTCGCTGATGTTGGGGCCGATGGTCGCAGCCTGCGGCGGCTATATTCCGATGCTATCTGGACGCGACCTCCGTCATACTGGCGG‑TACGCTCGACGAAc > 1:59595/1‑251 (MQ=255) gATGACCATTTTCTTCCACGATATGACAATGCCTGAGCGTGTCTCGCTGACCATGGCGATGCGAGATTCAGGAACCGTTCTCGACTGGAAAAGCCTGCATCTGAATGGCCCGATTGTTGATAAACATTCAACTGGTGGCGTCGGCGATGTGACTTCGCTGATGTTGGGGCCGATGGTCGACGCCTGCGGAGGCCATATTCCGATGAGCTTTGGTCGCGGCCTCAGTTCTTCTGGCGG‑CTCGCTCGAccca > 2:331936/1‑247 (MQ=255) gACCATTTTCTTCCACGATATGACAATGCCTGAGCGTGTCTCGCTGACCATGGCGATGCGAGATTCAGGAACCGTTCTCGACTGGAAAAGCCTGCATCTGAATGGCCCGATTGTTGATAAACATTCCACTGGTGGCGTCGGCGCTGTGACTTCGCTGATGTTGGGGCCGATGGTCGCAGCCTGCGGCGGCTATATTCCGATGATCTCTGGTCGCGTCCTCGGCCATCCAGGCGG‑TACGccggacacaccgg > 2:368634/1‑239 (MQ=255) ttttCTTCCACGATATGACAATGCCTGAGCGTGTCTCGCTGACCATGGCGATGCGAGATTCAGGAACCGTTCTCGACTGGAAAAGCCTGCATCTGAATGGCCCGATTGTTGATAAACATTCCACTGGTGGCGTCGGCGATGTGACTTCGCTGATGTTGGGGCCGATGGTCGCAGCCTGCGGCGGCTATATTCCGATGATCTCTGGTCGCGGCCTCGGTCATACTGGCGG‑TACGCTCGACAAACTGGAatc < 1:292293/250‑1 (MQ=255) tcCACGATATGACAATGCCTGAGCGTGTCTCGCTGACCATGGCGATGCGAGATTCAGGAACCGTTCTCGACTGGAAAAGCCTGCATCTGAATGGCCCGATTGTTGATAAACATTCCACTGGTGGCGTCGGCGATGTGACTTCGCTGATGTTGGGGCCGATGGTCGCAGCCTGCGGCGGCTATATTCCGATGATCTCTGGTCGCGGCCTCGGTCATACTGGCGG‑TACGCTCGACAAACTGGAatcc‑atcc < 1:147167/249‑1 (MQ=255) tcCACGATATGACAATGCCTGAGCGTGTCTCGCTGACCATGGCGATGCGAGATTCAGGAACCGTTCTCGACTGGAAAAGCCTGCATCTGAATGGCCCGATTGTTGATAAACATTCCACTGGTGGCGTCGGCGATGTGACTTCGCTGATGTTGGGGCCGATGGTCGCAGCCTGCGGCGGCTATATTCCGATGATCTCTGGTCGCGGCCTCGGTCATACTGGCGG‑TACGCTCGACAAACTGGAatcc‑atc < 1:376472/248‑1 (MQ=255) tcCACGATATGACAATGCCTGAGCGTGTCTCGCTGACCATGGCGATGCGAGATTCAGGAACCGTTCTCGACTGGAAAAGCCTGCATCTGAATGGCCCGATTGTTGATAAACATTCCACTGGTGGCGTCGGCGATGTGACTTCGCTGATGTTGGGGCCGATGGTCGCAGCCTGCGGCGGCTATATTCCGATGATCTCTGGTCGCGGCCTCGGTCATACTGGCGG‑TACGCTCGACAAACTGGAATCC‑ATccc < 1:66913/250‑1 (MQ=255) ccACGATATGGCAATGCCTGAGCGTGTCTCGCTGACCATGTCGAGGCGTGATTCAGGAACCGTTCTCGACTGGAAAAGCCTGCATCTGAAGGGCCCGATTGTTGATAAACATTCCACTGGTGGCGTCGGCGATGTGACTTCGCTGATGTTGGGGCCGATGGTCGCAGCCTGCGGCGGCTATATTCCGATGATCTCTGGTCGCGGCCTCGGTCATACTGGCGG‑TACGCTCGACAAACTGGAATCC‑ATCCCt < 2:381645/250‑1 (MQ=255) cACGATATGACAATGCCTGAGCGTGTCTCGCTGACCATGGCGATGCGAGATTCAGGAACCGTTCTCGACTGGAAAAGCCTGCATCTGAATGGCCCGATTGTTGATAAACATTCCACTGGTGGCGTCGGCGATGTGACTTCGCTGATGTTGGGGCCGATGGTCGCAGCCTGCGGCGGCTATATTCCGATGATCTCTGGTCGCGGCCTCGGTCATACTGGCGG‑TACGCTCGACAAAACGGAATTC‑ATCCCTgg > 1:207518/1‑251 (MQ=255) agatgccAATGCCTGGGCGTGTCTCGCAGACCATGGCGATGCGTGATGCAGGAACCGTTCTCGACCGGAAAAGCCTGCATCGTAATGGCCCGATTGTTGATAAACATTCCACTGGTGGCTTCGGCGATGTGGCTTCGCTGATGTTGGGTCCGATGGTCGCAGCCTGCGGCGGCTATATTCCGATGATCTCTGGTCGCGGCCTCGGGCATACTGGCGG‑TACGCTCGACAAACTGGAATCC‑ATCCCTGGCTTc < 2:190817/245‑1 (MQ=255) aaatGACAATGCCGGAGCGTGGCTCGCTTACCATGGCGATGCGAGAGTCAGGAACCGTTCTCGACGTGAAAAGCCTGCATCTGAATGGCCCGATTGTTGATAAACATTCCTCTGGTGGCGTCGGCGATGTGACTTCGCTGATGTTGGGGCCGATGGTCGCAGCCTGCGGCGGCTATATTCCGAGGATCTCTGGTCGCTGCCGCGGTCATACTGGCGG‑TACGCTCGACAAACTGGAATCC‑ATCCCTGGCTTc < 2:480424/249‑1 (MQ=255) atGACAATGCCTGAGCGTGTCTCGCTGACCATGGCGATGCGAGATTCAGGAACCGTTCTCGCCTGGACAAGCCTGCATCTGAATGGCCCGATTGTTGATAAACATTCCACTGGTGGCGTCGGCGATGTGACTTCGCTGATGTTGGGGCCGATGGTCGCAGCCTGCGGCGGCTATATTCCGTTGATCTCTTGGCGGCGCCTCGGTCCTACTGGCGGATCCG‑TCGCCCAACTGGAAtcc‑ctccccgggtttac > 2:103966/1‑242 (MQ=255) cAATGCCTGAGCGTGTCTCGCTGACCATGGCGATGCGAGATTCAGGAACCGTTCTCGACTGGAAAAGCCTGCATCTGAATGGCCCGATTGTTGATAAACATTCCACTGGTGGCGTCGGCGATGTGACTTCGCTGATGTTGGGGCCGATGGTCGCAGCCTGCGGCGGCtata > 2:75763/1‑171 (MQ=255) cAATGCCTGAGCGTGTCTCGCTGACCATGGCGATGCGAGATTCAGGAACCGTTCTCGACTGGAAAAGCCTGCATCTGAATGGCCCGATTGTTGATAAACATTCCACTGGTGGCGTCGGCGATGTGACTTCGCTGATGTTGGGGCCGATGGTCGCAGCCTGCGGCGGCtata < 1:75763/171‑1 (MQ=255) tGAGCGTGTCTCGCTGACCATGGCGATGCGAGATTCAGGAACCGTTCTCGACTGGCAAAGCCTGCATCTGAATGGCCCGATTGTTGATAAACATTCCACTGGTGGCGTCGGCGATGTGACTTCGCTGATGTTGGGGCCGATGGTCGCAGCCTGCGGCGGCTATATTCCGGTGATCTCTGGTCGCGGCCTCGGTCATACTGGCGG‑GACGCTCGACaaaa > 1:410522/1‑217 (MQ=255) tGAGCGTGTCTCGCTGACCATGGCGATGCGAGATCCAGGAACCGTTCTCGACTGGAAAAGCCTGCATCTGAATGGCCCGATTGTTGATAAACATTCCACTGGTGGCGTCGGCGATGTGACTTCGCTGATGTTGGGGCCGATGGTCGCAGCCTGCGGCGGCTATATTCCGATGATCTCTGGTCGCGGCCTCGGTCATACTGGCGG‑TACGCTCGACAAAc < 2:410522/218‑1 (MQ=255) ccGCTGACCATGGCGATGTGAGAGTCAGGAACCGTTCTCGACTGGAAAAGCCTGCATCTGAATGGCCCGATTGTTGATAAACATTCCACTGGTGGCGTCGGCGATGTGACTTCGCTGATGTTGGGGCCGATGGTCGCAGCCTGCGGCGGCTATATTCCGATGATCTCTGGTCGCGGCCTCGGTCATACTGGCGG‑TACGCTCGACAAACTGGAATCC‑ATCCCTGGCTTCGAC‑A‑TTTTCCCGGATGACAACCg < 1:260854/250‑1 (MQ=255) cGCTGACCATGGCGATGCGAGATTCAGGAACCGTTCTCGACTGGAAAAGCCTGCATCTGAATGGCCCGATTGTTGATAAACATTCCACTGGTGGCGTCGGCGATGTGACTTCGCTGATGTTGGGGCCGATGGTCGCAGCCTGCGGCGGCTATATTCCGATGATCTCTGGTCGCGGCCTCGGTCATACTGGCGG‑TACGCTCGACAAACTGGAATCC‑ATCCCTGGCTTCGAC‑A‑TTTTCCCGGATGACAAcc < 2:379233/249‑1 (MQ=255) cGCTGACCATGGCGATGCGAGATTCAGGAACCGTTCTCGACTGGAAAAGCCTGCATCTGAATGGCCCGATTGTTGATAAACATTCCACTGGTGGCGTCGGCGATGTGACTTCGCTGATGTTGGGGCCGATGGTCGCAGCCTGCGGCGGCTATATTCCGATGATCTCTGGTCGCGGCCTCGGGCATACTGGCGG‑TACGCTCGGCAAACTGGGATCC‑ATCCCTGGCTTCGGC‑A‑ATTTCCCGGATGACaaacgg > 1:200148/1‑247 (MQ=255) cATGGCGATGCGAGATTCAGGAACCGTTCTCGACTGGAAAAGCCTGCATCTGAATGGCCCGATTGTTGATAAACATTCCACTGGTGGCGTCGGCGATGTGACTTCGCTGATGTTGGGGCCGATGGTCGCAGCCTGCGGCGGCTATATTCCGATGATCTCTg < 2:22990/161‑1 (MQ=255) cATGGCGATGCGAGATTCAGGAACCGTTCTCGACTGGAAAAGCCTGCATCTGAATGGCCCGATTGTTGATAAACATTCCACTGGTGGCGTCGGCGATGTGACTTCGCTGATGTTGGGGCCGATGGTCGCAGCCTGCGGCGGCTATATTCCGATGATCTCTg > 1:22990/1‑161 (MQ=255) cATGGCGATGCGAGATTCAGGAACCGTTCTCGACTGGAAAAGCCTGCATCTGAATGGCCCGATTGTTGATAAACATTCCACTGGTGGCGTCGGCGATGTGACTTCGCTGATGTTGGGGCCGATGGTCGCAGCCTGCGGCGGCTATATTCCGATGATCTCTGGTCGCGGCCTCGGTCATACTGGCGG‑TACGCTCGACAAACTGGAATCC‑ATCCCTGGCTTCGAc < 2:134497/223‑1 (MQ=255) tctcGACTGGAAAAGCCTGCATCTGAATGGCCCGATTGTTGATAAACATTCCACTGGTGGCGTCGGCGATGTGACTTCGCTGATGTTGGGGCCGATGGTCGCAGCCTGCGGCGGCTATATTCCGATGGTCTCTGGTCGCGGCCTCGGTCATACTGGCGG‑GACGCTCGGCAAACTGGAATCC‑ATCCCCGGCTTCGCCCT‑TTTTCCCGG‑GGGCAAACGTTTCCCCGAAAATTTTAAAAACATCGGCggggggg > 2:454073/1‑245 (MQ=255) cGACTGGAAAAGCCTGCATCTGAATGGCCCGATTGTTGATAAACATTCCACTGGTGGCGTCGGCGATGTGACTTCGCTGATGTTGGGGCCGATGGTCGCAGCCTGCGGCGGCTATATTCCGATGATCTCTGGGCGCGGCCTCGGTCATACTGGCGG‑TAATCCCGACAAAATGGAATCCCTTCCCGGGCT‑CGAC‑A‑TTTTCCCCGGTGACAACCGTTTCCCCGGAATTTTTAAAGACGTCGGCGTgggggttt > 2:169502/1‑245 (MQ=255) gaaaaatcttgcttctaaaTGGCCCGATTGTTGATAAACATTCCACTGGTGGCGTCGGCGATGTAACTGCTATAATTTTGGGGCCTATGGTCGCAGCCTGCGGCGGCTATATTTCGATGATCTCTGGTCGCGGCCTCGGTAATCCTGGCGG‑TACGCTCGACAAACTGGAATCC‑ATCCCTGGCTTCAAC‑A‑TTTTCCCGGATGACAACCGTTTCCGCGAAATTATTAAAGACGTCGGCGTGGCG‑ATTATCgg < 1:3408/233‑1 (MQ=255) gCATCTGAATGGCCCGATTGTTGATAAACATTCCACTGGTGGCGTCGGCGATGTGACTTCGCTGATGTTGGGGCCGATGGTCGCAGCCTGCGGCGGCTATATTCCGATGATCTCTGGTCGCGGCCTCGGTCATACTGGCGG‑TACGCTCGACAAACTGGAATCC‑ATCCCTGGCTTCGAC‑A‑TTTTCCCGGATGACAACCGTTTCCGCGAAATTATTAAAGACGTCGGCGTGGCG‑ATTATCGGTCAGACCAgc < 1:243161/250‑2 (MQ=255) cTGAATGGCCCGATTGTTGATAAACATTCCACTGGTGGCGTCGGCGATGTGACTTCGCTGATGTTGGGGCCGATGGTCGCAGCCTGCGGCGGCTATATTCCGATGATCTCTGGTCGCGGCCTCGGTCATACTGGCGG‑TACGCTCGACAAACTGGAATCC‑ATCCCTGGCTTCGAC‑A‑TTTTCCCGGATGACAACCGTTTCCGCGAAATTATTAAAGACGt < 1:209821/218‑1 (MQ=255) cccGATTGTTGATAAACATTCCACTGGTGGCGTCGGCGATGTGACTTCGCTGATGTTGGGGCCGATGGTCGCAGCCTGCGGCGGCTATATTCCGATGATCTCTGGTCGCGGCCTCGGTCATACTGGCGG‑TACGCTCGACAAACTGGAATCC‑ATCCCTGGCTTCGAC‑A‑TTTTCCCGGATGACAACCGTTTCCGCGAAATTATTAAAGACGTCGGCGTGGCG‑ATTATCGGTCAGACCAGCTCACTGGCTCCgg < 2:344859/251‑1 (MQ=255) gATTGTTGATAAACATTCCACGGGGGGCGTCGGCGATGTGACTTCGCTGATGTTGGGGCCGATGGTCGCAGCCTGCGGCGGCTATATTCCGATGATCTCTGGTCGCGGCCTCGGTCATACTGGCGG‑TACGCTCGACAAACTGGAATCC‑ATCCCTGGCTTCGAC‑A‑TTTTCCCGGAGGACAACCGTTTCCGCGAAATTATTAAAGACGTCGGCGTGGCG‑ATTATCGGTCAGACCAGCTCACTGGCTCCGGcgg < 2:409343/251‑3 (MQ=255) ttgATAAACATTCCACTGGTGGCGTCGGCGATGTGACTTCGCTGATGTTGGGGCCGATGGTCGCAGCCTGCGGCGGCTATATTCCGATGATCTCTGGTCGCGGCCTCGGTCATACTGGCGG‑TACGCTCGACAAACTGGAATCC‑ATCCCTGGCTTCGGC‑A‑TTTTCCCGGATGCCAACCGTTTCCGCGAAATTATTAAAAACGTCGGCGGGGCGGATT‑TCGGTCAGACCaccccaccggctcccgcgggtaa > 1:274578/1‑228 (MQ=255) ccACTGGTGGCGTCGGCGATGTGACTTCGCTGATGTTGGGGCCGATGGTCGCAGCCTGCGGCGGCTATATTCCGATGGTCTCTGGTCGCGGCCTCGGTCATACTGGCGG‑TACGCTCGACAAAATGGAATCC‑ATCCCTCGCCTCG‑C‑ACTTTTTTCGGGTGGCAACCCTTTTCACGAAATTTTTTAAGACGTCGGCGGGGGG‑GTTTTCGGTTAGACCAACTCACCGGGTCCGGCCGGGAAACGTTTTTAcgcc > 2:162307/1‑250 (MQ=255) | GAAATTATTCGTAAAAAACGTGATGGTCATGCGCTGAGCGATGAAGAAATTCGTTTCTTTATCAACGGTATTCGCGACAACACTATCTCCGAAGGGCAGATTGCCGCCCTCGCGATGACCATTTTCTTCCACGATATGACAATGCCTGAGCGTGTCTCGCTGACCATGGCGATGCGAGATTCAGGAACCGTTCTCGACTGGAAAAGCCTGCATCTGAATGGCCCGATTGTTGATAAACACTCCACCGGTGGCGTCGGCGATGTGACTTCGCTGATGTTGGGGCCGATGGTCGCAGCCTGCGGCGGCTATATTCCGATGATCTCTGGTCGCGGCCTCGGTCATACTGGCGG‑TACGCTCGACAAACTGGAATCC‑ATCCCTGGCTTCGAC‑A‑TTTTCCCGGATGACAACCGTTTCCGCGAAATTATTAAAGACGTCGGCGTGGCG‑ATTATCGGTCAGACCAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCG > NC_000913/4618244‑4618735 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |