| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,510,238 | T→G | intergenic (+445/+452) | insO → / ← fecE | IS911B regulator fragment/ferric citrate ABC transporter ATP binding subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,510,238 | 0 | T | G | 89.4% | 115.5 / 6.0 | 48 | intergenic (+445/+452) | insO/fecE | IS911B regulator fragment/ferric citrate ABC transporter ATP binding subunit |
| Reads supporting (aligned to +/- strand): ref base T (3/2); new base G (18/24); total (21/27) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.44e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.95e-02 | |||||||||||
CGCGCTTTCCCTCTGGCGAAAAAGGGAGAAGGACGGGCCCGTCTGCCTTCACTTTATGCCAGCTTCGGTAAGCTGGGTGAGACACCGACTCATGAAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAATTCCGTTCCATGGT‑TGCTTTTGATTTACGTTGGCGTCTGATCATTGATTTATCCTCAAAAGCCCAACCTCATTGGTAATGAACCAGCTCCGTGAATGTCCGCTCTGGCACAGAGCGAAATTTTTTGATCTCCCCCCTGAAATCTAAACTTAGTCATGTCACGTTTTTGGGTTTCTAAAATTTTAACTTCGCGTTTTTCGTTGCCGTAAGGGTTATACAGAAATGTCCGTTAAGCAGAGTTCAAAATTGATT > NC_000913/4509996‑4510478 | cgcgCTTTCCCTCTGGCGAAAAAGGGAGAAGGACGGGCCCGTCTGCCTTCACTTTATGCCAGCTTCGGTAAGCTGGGTGAGACACCGACTCATGAAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAATTCCGTTCCAGGGT‑TGCtt < 1:419759/251‑1 (MQ=255) gcTTTCCCTCTGGCGAAAAAGGGAGAAGGACGGGCCCGTCTGCCTTCACTTTATGCCAGCTTCGGTAAGCTGGGTGAGACACCGACTCATGAAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAATTCCGTTCCAGGGT‑TGCTTTTg > 1:30143/1‑251 (MQ=255) ttCCCGCTGGCGAAAAAGGGAGAAGGACGGGCCCGTCTGCCTTCACTTTATGCCAGCTTCGGTAAGCTGGGTGAGACACCGACTCATGAAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACACTGGTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAATTCCGTTCCAGGGT‑TGCTTTTGa < 1:306991/249‑1 (MQ=255) cccTCTGGCGTAAAAGGGCTAAGGACGGGCCCGTCTGCCGTCTCTTTATGCCCGCTTCGGTACGCTGGGTGAGTCTCCGTCTCACGACGATATCATTGATAACAATCGATCCATCAACTTGCCTGTATAACGTGGCTGCCGGGGATTAAGAAAGCTGCCCCTACCTAAGTATTTGCAGACGCACTCGTGTTAGAAAAAGCGGTGGTCAGAAACTGGATTAGCAATTCCGTTCCAGGGT‑TGCTTTTGATTTa < 1:30246/251‑1 (MQ=255) ctGGCGAAAAAGGGAGAAGGACGGGCCCGTCTGCCTTCACTTTATGCCAGCTTCGGTAAGCTGGGTGAGACACCGACTCATGAAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAATTCCGTTCCAGGGT‑TGCTTTTGATTTACGtt > 2:458349/1‑251 (MQ=255) gcaaaaaaGGGAGAAGGGCGGGCCCGTCTGCCTTCGCTTTAGGCCAGCTTCGGTAACCTGGGTGAGAAACCGACTCATGAAGATATCATGGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGAAATATTGATGGTCAGAAACTGGATTAGCAATTCCGTTCCAGGGT‑TGCTTGTGATTTACGTTGGc < 2:66280/248‑1 (MQ=255) aaaGGGAGAAGGACGGGCCCGTCTGCCTTCACTTTATGCCAGCTTCGGTAAGCTGGGTGAGACACCGACTCATGAAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAATTCCGTTCCAGGGT‑TGCTTTTGATTTACGTTGGCGTCTg < 1:345092/251‑1 (MQ=255) tCTGCCTTCACTTTATGCCAGCTTCGGTAAGCTGGGTGAGACACCGACTCATGAAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAATTCCGTTCCAGGGT‑TGCTTTTGATTTACGTTGGCGTCTGATCATTGATTTATCCTCaaa > 1:173820/1‑250 (MQ=255) ttATGCCAGCTTCGGTAAGCTGGGTGAGACACCGACTCATGAAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAATTCCGTTCCAGGGT‑TGCTTTTGATTTACGTTGGCGTCTGATCATTGATTGATCCTCAAAAGCCCAACCTc < 2:222033/249‑1 (MQ=255) tATGCCAGCTTCGGTAAGCTGTGTGAGACACCGACTCATGAAGATATCATTGGTAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAAAGCACACTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAATTCCGTTCCATGGT‑TGCTTTTGATTTACGTTGGCGTCTGATCATTGATTTATCCTCAAAAGCCCAACCTCAt < 1:191166/250‑1 (MQ=255) tCGGTAAGCTGGGTGAGACACCGACTCATGAAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAATTCCGTTCCAGGGT‑TGCTTTTGATTTACGTTGGCGTCTGATCATTGATTTATCCTCAAAAGCCCAACCTCATTGGTAATGa < 2:431541/249‑1 (MQ=255) cGGTAAGCTGGGTGAGACACCGACTCATGAAGATATCATTGATAACAATCGATCCAACAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGAAAAATCGATTGTCAGAAACTGGATTAGCAATTCCGTTCCAGGGT‑TGCTTTTGATTTACGTTGGCGTCTGATCATTGATTTATCCTCAAAAGCCCAACCTCATTGGTAATGAAc < 1:28628/250‑1 (MQ=255) aaGCTGGGTGAGACACCGACTCATGAAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAATTCCGTTCCAGGGT‑TGCTTTTGATTTACGTTGGCGTCTGATCATTGATTTATCCTCAAAAGCCCAACCTCATTGGTAATGAACCAGc < 2:183736/250‑1 (MQ=255) aaGCTGGGTGAGACACCGACTCATGAAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAATTCCGTTCCAGGGT‑TGCTTTTGATTTACGTTGGCGTCTGATCATTGATTTATCCTCAAAAGCCCAACCTCATTGGTAATGAACCAGCt < 2:305965/251‑1 (MQ=255) aGCTGGGTGAGACACCGACTCATGAAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAATTCCGTTCCAGGGT‑TGCTTTTGATTTACGTTGGCGTCTGATCATTGATTTATCCTCAAAAGCCCAACCTCATTGGTAATGAACCAGCTc < 1:458349/251‑1 (MQ=255) cTGGGTGAGACACCGACTCATGAAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTACCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAATTCCGTTCCAGGGT‑TGCTTTTGATTTACGTTGGCGTCTGATCATTGATTTATCCTCAAAAGCCCAACCTCATTGGTAATGAACCAGCTCCg > 1:6295/1‑251 (MQ=255) gacccccacgcATGAAGATCTCATGGATAACAAGCGCTCTATCAACTGGCCTGTAGAACGTGGCTGCCGGTGATGAAGAACGAAGCTCCTACCTAAGTAGGAGCAAACGCACACTTTTTAGAAAAAGCGATGGTCATAAACTGGATTAGCAATTCCGTTCCAGGGT‑TGCTTTTGATTTACGTTGGCGTCTGATCACTGATCTATCCTCAAAAGCCCAACCCCAGTGGTAATGAACCAGCTCCGTGAATGtt < 2:404548/241‑2 (MQ=255) cTCATGAAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAATTCCGTTCCAGGGT‑TGCTTTTGATTTACGTTGGCGTCTGATCATTGATTTATCCTCAAAAGCCCAACCTCATTGGTAATGAACCAGCTCCGTGAATGTCCGCTCTgg > 1:105592/1‑251 (MQ=255) cATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAATTCCGTTCCATGGT‑TGCTTTTGATTTACGTTGGCGTCTGATCATTGATTTATCCTCAAAAGCCCAACCTCATTGGTAATGAACCAGCTCCGTGAATGTCCGCTCTGGCACAGAGCGAAAt > 2:143854/1‑251 (MQ=255) atttaTAACAATAGATCCATCAACGGGCCTGTAGAACGTTGCTGCCGGTGATTAAGAAAGCAGCACCTACCTAAGGAGTAGCAAACGCACACTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAATTCCGTTCCAGGGT‑GGCTTTTGAGTTACGTTGGCGTCTGATCATTGATGTATCCTCAAAAGCCCAACCTCATTGGTAATGAACCAGCTCCGTGAATGTCCGCTCTGGCACAGAGCGAAAtt < 2:211897/247‑1 (MQ=255) tGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAATTCCGTTCCAGGGT‑TGCTTTTGATTTACGTTGGCGTCTGATCATTGATTTATCCTCAAAAGCCCAACCTCATTGGTAATGAACCAGCTCCGTGAATGTCCGCTCTGGCACAGAGCGAAAtttt > 2:151457/1‑251 (MQ=255) aTAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAATTCCGTTCCAGGGT‑TGCTTTTGATTTACGTTGGCGTCTGATCATTGATTTATCCTCAAAAGCCCAACCTCATTGGTAATGAACCAGCTCCGTGAATGTCCGCTCTGGCACAGAGCGAAAtttttt < 1:408916/251‑1 (MQ=255) cAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAATTCCGTTCCAGGGT‑TGCTTTTGATTTACGTTGGCGTCTGATCATTGATTTATCCTCAAAAGCCCAACCTCATTGGTAATGAACCAGCTCCGTGAATGTCCGCTCTGGCACAGAGCGAAATTTTTTGAtc > 2:235750/1‑251 (MQ=255) aTCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAATTCCGTTCCAGGGT‑TGCTTTTGATTTACGTTGGCGTCTGATCATTGATTTATCCTCAAAAGCCCAACCTCATTGGTAATGAACCAGCTCCGTGAATGTCCGCTCTGGCACAGAGCGAAATTTTTTGAtctc < 1:455293/251‑1 (MQ=255) tCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAATTCCGTTCCATGGT‑TGCTTTTGATTTACGTTGGCGTCTGATCATTGATTTATCCTCAAAAGCCCAACCTCATTGGTAATGAACCAGCTCCGTGAATGTCCGCTCTGGCACAGAGCGAAATTTTTTGATCTcc > 1:113819/1‑251 (MQ=255) aTCAACTGGCCTGTATAACGTGGCTGCAGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGAAAAATCGCTGGTCAGAAACTGGATTCGCAATTCAGTTCCAGGGT‑TGCTTTTGATTTACGTTGGCGTCTGATCATTGATTTATCCTCAACAGCCCGACCTCATTGGTAATGAACCAGCTCCGTGAATGTCCGCTCTGGCACAGAGCGAAATTTTTTGATCTCCCCCCTg > 1:193625/1‑250 (MQ=255) cAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAATTCCGTTCCATGGT‑TGCTTTTGATTTACGTTGGCGTCTGATCATTGATTTATCCTCAAAAGCCCAACCTCATTGGTAATGAACCAGCTCCGTGAATGTCCGCTCTGGCACAGAGCGAAATTTTTTGATCTCCCCCCTGaaa < 1:143854/251‑1 (MQ=255) aaCGTGGCTGCCGGTGATTAAGAAAGCTGCCCCTCCCTAAGTAGTAGCAACCGCACACTTTTTAGAACAATCGATGGTCAGAAACTGGATTAGCAATTCCGTTCCATAGT‑TGCTTTTGATTTACGTTGGCGTCTGATCATTGATTTATCCTCAAAAGCCCAACCTCTTTGGTAATGAACCAGCTCCGTGATTGTCCGCTCTGGCACAGATCGAACTTTTTTGATCTCCCCCCTGTAATCTATACTTactc > 2:68355/1‑247 (MQ=255) gTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTGAGTAGTAGCAAACGCACGCTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAATTCCGTTCCAGGGT‑TGCTTTTGATTTACGTTTGCGTCTGATCATTGATTTATCCTCAAAAGCGCAACCTCATTGGTAATGAATCAGCTCCGTGAATGTCCGCTCTGTCACAGAGGGAAATTTGTTGATCTCCCCCCTGAAATCTAAAcgtcttcatgt < 2:61826/251‑11 (MQ=255) gcttccGGTTATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACTCTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAATTCCGTTCCAGGGT‑TGCTTTTGATTTACGTTGGCGTCTGATCATTGATTTATCCTCAAAAGCCCAACCGCATTTGTAATGAACCAGCTCCGTGAATGTCCGCTCTGTCACAGAGCTAAATTTTTTGATCTCCCCCCTTAAATCTAAACTTAGTCATGTCAc < 2:33139/247‑1 (MQ=255) aaGCTGCACCTACCTAAGTAGAAGCAAAAGCACACTTATTAGAAAAATCGATGATCAGAAAATGGATTAGCCATTCCGTTCCAGGGT‑TGCTTTTGATTTACGTTGGCGTCTGATCATTGATTTATCCTCAAAAGCCCAACCTCATTGTTAATGAACCAGCTCCGTGAATGTCCGCTCTGGAACAGAGCGAAATTTTTTGATCTCCACCCTAGACTCTAAACTTAGTCATGTCACGGTTTTGGGTTTCTaa > 2:239260/1‑250 (MQ=255) aGCTGCACCTACCTAAGTAGTAGCAAACGCACAGTTTTTAGAAAAATCGATGGTCAGAAACTGGAATAGCAATTCCGTTCCAGGGT‑TGCTTTTGATTTACGTTGGCGTCGGAGCATTGATTGATCCTCAAAAGCCCAACCTCATTGGTAATGAACCAGCTCCGTGAAGGTCCGCTCTGGCACAGAGCGAAATTTTTTGATCTCCCCCCTGAAATCTAAACTTAGTCATGTCACGTTTTTGGGTTTCTaaaa < 1:68355/251‑1 (MQ=255) cTGCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAATTCCGTTCCAGGGT‑TGCTTTTGATTTACGTTGGCGTCTGATCATTGATTTATCCTCAAAAGCCCAACCTCATTGGTAATGAACCAGCTCCGTGAATGTCCGCTCTGGCACAGAGCGAAATTTTTTGATCTCCCCCCTGAAATCTAAACTTAGTCATGTCACGTTTTTGGGTTTCt < 1:475668/245‑1 (MQ=255) cTGCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAATTCCGTTCCAGGGT‑TGCTTTTGATTTACGTTGGCGTCTGATCATTGATTTATCCTCAAAAGCCCAACCTCATTGGTAATGAACCAGCTCCGTGAATGTCCGCTCTGGCACAGAGCGAAATTTTTTGATCTCCCCCCTGAAATCTAAACTTAGTCATGTCACGTTTTTGGGTTTCt > 2:475668/1‑245 (MQ=255) tacctaAGTAGTAGCAAACGCACACTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAATTCCGTTCCAGGGT‑TGCTTTTGATTTACGTTGGCGTCTGATCATTGATTTATCCTCAAAAGCCCAACCTCATTGGTAATGAACCATCTCCGTGAATGTCCGCTCTGGCCCAGAGCGAAATTTTTTGATCTCCCCCCTGCAATCTAAACTTAGTCATGTCACGTTTTTGGGTTTCTAAAATTTTAACtt > 1:73348/1‑251 (MQ=255) cctaAGTAGTAGCAAACGCACACTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAATTCCGTTCCAGGGT‑TGCTTTTGATTTACGTTGGCGTCTGATCATTGATTTATCCTCAAAAGCCCAACCTCATTGGTAATGAACCAGCTCCGTGAATGTCCGCTCTGGCACAGAGCGAAATTTTTTGATCTCCCCCCTGAAATCTAAACTTAGTCATGTCACGTTTTTGGGTTTCTAAAATTTTAACTTcg < 1:368935/251‑1 (MQ=255) cctaAGTAGTAGCAAACGCACACGTTTTAGAAAAATCGATGGGTAGAAACTGGATTAGCAATTCCGTGCCAGGGT‑TGCTTTTGATTTACGTTGGCGTCTGATCATTGATTTATCCTCAAAAGCCCAACCTCATTGGTAATGAACCAGCTCCGTGAATGTCCGCTCTGTCACAGAGCGAAATTTTTTGATCTCCCCCCTGAAATCTAAACTTAGTCATGTCACGTTTTTGGGTTTCTAAAATTTTAACTTcg < 2:133416/251‑1 (MQ=255) gCACACTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAATTCCGTTCCAGGGT‑TGCTTTTGATTTACGTTGGCGTCTGATCATTGATTTATCCTCAAAAGCCCAACCTCATTGGTAATGAACCAGCTCCGTGAATGTCCGCTCTGGCACAGAGCGAAATTTTTTGATCTCCCCCCTGAAATCTAAACTTAGTCATGTCACGTTTTTGGGTTTCTAAAATTTTAACTTCGCGTTTTTCGTTGCCGt > 2:404851/1‑250 (MQ=255) cacaCTTTTTAGAAAATTCGATGGTCAGGAACTGGATTAGCAATTCCGTTCCAGGGT‑TGCTTTTGATTTACGTTGGCGTCTGATCATTGATTTATCCTCAAAAGCCCAACCTCATTGGTAATGCACCAGCTCCATGAATGTCCGCTCTGGCACAGAGCGCAATTTTTTGATCTCCCCCCTGAAATCTAAACTTAGTCATGTCACGTTTTTGGGTTTATAAAATTTTAACTTCGCGTTTTTCGTTGCCGTa > 1:351487/1‑250 (MQ=255) ttAGAAAAATAGATGGTCAGAAACTGGATTAGCAATTCCGCTCCA‑GGTGTGCTTTTGATTTACGTGTGCGTCTGATCATTGATTTAGCCTCAAAAGCCCAACCTCATTGGTAAGGAACCAGCTCCGTGAATGTCCGCTCTGGCACAGAGCGAAAGTTTTTGATCTCCACCCTGAAATCTAAACTTAGTCATGTCACGTTTTTGGGTTTCGAAAATTTTAACTTCGCGTTTTTCGTGGCCGTAAGGGTtat < 2:105592/250‑1 (MQ=255) gATGGTCAGAAACTGGATTAGCAATTCCGTTCCAGGGT‑TGCTTTTGATTTACGTTGGCGTCTGATCATTGATTTATCCTCAAAAGCCCAACCTCATTGGTAATGAACCAGCTCCGTGAATGTCCGCTCTGGCACAGAGCGAAATTTTTTGATCTCCCCCCTGAAATCTAAACTTAGTCATGTCACGTTTTTGGGTTTCTAAAATTTTAACTTCGCGt > 2:360294/1‑217 (MQ=255) gATGGTCAGAAACTGGATTAGCAATTCCGTTCCAGGGT‑TGCTTTTGATTTACGTTGGCGTCTGATCATTGATTTATCCTCAAAAGCCCAACCTCATTGGTAATGAACCAGCTCCGTGAATGTCCGCTCTGGCACAGAGCGAAATTTTTTGATCTCCCCCCTGAAATCTAAACTTAGTCATGTCACGTTTTTGGGTTTCTAAAATTTTAACTTCGCGt < 1:360294/217‑1 (MQ=255) aTGGTCAGAAACTGGATTAGCAATTCCGTTCCAGGGT‑TGCTTTTGATTTACGTTGGCGTCTGATCATTGATTTATCCTCAAAAGCCCAACCTCATTGGTAATGAACCAGCTCCGTGAATGTCCGCTCTGGCACAGAGCGAAATTTTTTGATCTCCCCCCTGAAATCTAAACTTAGTCATGTCACGTTTTTGGGTTTCTAAAATTTTAACTTCGCGTTTTTCGTTGCCGTAAGGGTTATACAGAAATTTcct > 2:427608/1‑250 (MQ=255) ggTCAGAAACTGGATTAGCAATTCCGTTCCAGGGT‑TGCTTTTGATTTACGTTGGCGTCTGATCATTGATTTATCCTCAAAAGCCCAACCTCATTGGTAATGAACCAGCTCCGTGAATGTCCGCTCTGGCACAGAGCGAAATTTTTTGATCTCCCCCCTGAAATCTAAACTTAGTCATGTCACGTTTTTGGGTTTCTAAAATTTTAACTTCGCGTTTTTCGTTGCCGTAAGGGTTATACAGAAATGTCCGtt < 1:286886/251‑1 (MQ=255) ggtaGAAACTGGATTAGCAATTCCGTTCCAGGGG‑TGCTTTTGATTGTCGTTTGCGTCTGATCATTGATTTATCCCCAAAATCCCAACCTCATTGGTAATGATCCAGCGCCGTGAAGGTCCGCTCTGTCACAGAGCGAAATTTTTTGATCGCCCCCCTGAAATCTAAACTTAGTCATGTCACGTTTTTGGTTTTCTAAAATTTTAACTTCGCGTTTTTCGTTGCCGTAAGGTTTATACAGAAAGTTCCGTTa < 2:414596/248‑1 (MQ=255) aCTGGATTAGCAATTCCGTTCCAGGGT‑TGCTTTTGATTTACGTTGGCGTCTGATCATTGATTTATCCTCAAAAGCCCAACCTCATTGGTAATGAACCAGCTCCGTGAATGTCCGCTCTGGCACAGAGCGAAATTTTTTGATCTCCCCCCTGAAATCTAAACTTAGTCATGTCACGTTTTTGGGTTTCTAAAATTTTAACTTCGCGTTTTTCGTTGCCGTAAGGGTTATACAGAAATGTCCGTTAAGCag > 1:426271/1‑249 (MQ=255) aaTTCCGTTCCAGGGT‑TGCTTTTGATTTACGTTGGCGTCTGATCATTGATTTATCCTCAAAAGCCCAACCTCATTGGTAATGAACCAGCTCCGTGAATGTCCGCTCTGGCACAGAGCGAAATTTTTTGATCTCCCCCCTGAAATCTAAACTTAGTCATGTCACGTTTTTGGGTTTCTAAAATTTTAACTTCGCGTTTTTCGTTGCCGTAAGGGTTATACAGAAATGTCCGTTAAGCAGAGTTCAAAattg > 2:12887/1‑250 (MQ=255) ttCCGTTCCAGGAT‑TGCTTTTGATTTACGTTGGCGTCTGATCATTGATTTATCCTCAAAAGCCCAACCTCATTGGTAATGAACCAGCTCCGAGACTGTCCGCTCTGGCACAGAGCGAAATTTTTTGATCTCCCCCCTGAAATCTAAACTTAGTCATGTCACGTTTTTGGGTTTCTAAAATTTTAACTTCGCGTTTTTCGTTGCCGTATGGGTTAGACAGAAATGTCCGTTAATCAGAGTTCCAAattgatt > 2:353218/1‑251 (MQ=255) | CGCGCTTTCCCTCTGGCGAAAAAGGGAGAAGGACGGGCCCGTCTGCCTTCACTTTATGCCAGCTTCGGTAAGCTGGGTGAGACACCGACTCATGAAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAATTCCGTTCCATGGT‑TGCTTTTGATTTACGTTGGCGTCTGATCATTGATTTATCCTCAAAAGCCCAACCTCATTGGTAATGAACCAGCTCCGTGAATGTCCGCTCTGGCACAGAGCGAAATTTTTTGATCTCCCCCCTGAAATCTAAACTTAGTCATGTCACGTTTTTGGGTTTCTAAAATTTTAACTTCGCGTTTTTCGTTGCCGTAAGGGTTATACAGAAATGTCCGTTAAGCAGAGTTCAAAATTGATT > NC_000913/4509996‑4510478 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |