| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,463,952 | G→A | S253F (TCC→TTC) | treC ← | trehalose‑6‑phosphate hydrolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,463,952 | 0 | G | A | 94.9% | 166.1 / ‑1.8 | 59 | S253F (TCC→TTC) | treC | trehalose‑6‑phosphate hydrolase |
| Reads supporting (aligned to +/- strand): ref base G (2/1); new base A (25/31); total (27/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.88e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.89e-01 | |||||||||||
ATCACCAAAGCGAGAAACAATGCGCGGCTGATCGTGGTTACACCAGAACAAGGCATTCCATGCTACGTTGTGCATTCCTTGTTGCCAGTGGCGGAACAATGTTTTCAACGCCACAAAGTCAGGTTTAGCCAGCGTCCATTTTTCACCACCGGGATAATCGACCTTCAGGTGATGAAAATTAAAGGTCATCGACAATTCACTGCCTGTCAGAGCCGCGTATCGCTGGCAATGCTCAAGGCTGGTGGAGGACATTTCACCTACGGTCATTAACCCGCGTGGCGTAAACACATCGCGGTTCATCTCGTGCAAAAACTCGTGTGCTCGTGGCCCGTCGGTGTAGAAGCGACGCCCGTCGCCGTCCAGGTCTTCAGGGAAACGCGGGTCTTTGGAGATCAGATTCACCACATCCAGGCGCAACCCGTCGACCCCACGATCGGCCCAGAACTCACAGACTTTTTTCAGCTCTGCGCGTACCGCTGGATTCTCCCA > NC_000913/4463705‑4464193 | atcaCCAAAGCGAGAAACAATGCGCGGCTGATCGTGGTTACACCAGAACAAGGCATTCCATGCTACGTTGTGCATTCCTTGTTGCCAGTGGCGGAACAATGTTTTCAACGCCACAAAGTCAGGTTTAGCCAGCGTCCATTTTTCACCACCGGGATAATCGACCTTCAGGTGATGAAAATTAAAGGTCATCGACAATTCACTGCCTGTCAGAGCCGCGTATCGCTGGCAATGCTCAAGGCTGGTGGAGAACa < 2:82458/251‑1 (MQ=255) ccccAAAGCGAGAAACAATGCGCGGCTGATCTTGGTTACTCCAGAACAAGGCATTCCATGCTACGTTGTGCATTCCTTGTTGCCAGTGGCAGAACAATGTTTTCAACGCCACAAAGTCAGGTTTAGCCAGCGTCCATTTTTCACCACCGGGATAATCGACCTTCAGGTGATGAAAATTAAAGGTCATCGACAATTCACTGCCTGTCAGAGCCGCGTATCGCTGGCAATGCTCAAGGCTGGTGGAGAACAtt < 1:296513/249‑1 (MQ=255) caCCAAAGCGAGAAACAATGCGCGGCTGATCGTGGTTACACCAGAACAAGGCATTCCATGCTACGTTGTGCATTCCTTGTTGCCAGTGGCGGAACAATGTTTTCAACGCCACAAAGTCAGGTTTAGCCAGCGTCCATTTTTCACCACCGGGATAATCGACCTTCAGGTGATGAAAATTAAAGGTCATCGACAATTCACTGCCTGTCAGAGCCGCGTATCGCTGGCAATGCTCAAGGCCGGTGGAGAACAtt > 1:54831/1‑251 (MQ=255) cAAAGCGAGAAACAATGCGCGGCTGATCGTGGTTACACCAGAACAAGGCATTCCATGCTACGTTGTGCATTCCTTGTTGCCAGTGGCGGAACAATGTTTTCAACGCCACAAAGTCAGGTTTAGCCAGCGTCCATTTTTCACCACCGGGATAATCGACCTTCAGGTGATGGAAATTAAAGGTCATCTACAATTCACTGCCTGTCAGAGCCCCGTATCGCTGGCAAAGCTAAAGGCTGGTGGAGGACATTTcc > 1:124849/1‑250 (MQ=255) gCGAGAAACAATGCGCGGCTGATCGTGGTTACCACAGAACAAGGCATTCCATGCTAAGTCGTGAATTCCTTGTTGCCAGGGGCAGAAAAATGTTTCCAACGCCACAAAGTCAGGTTTAGCTAGCGTCCATTTTTCCCCTCCGGGATAAGCGACCTTCAGGTGATGAAAATTAAAGGTCATCGACAATTCACTGCTTGTCAGAGCCGCGTATCGCTGGCAATGCTCAAGGCTGGTGGAGAACATTTCACCTa < 2:181247/251‑1 (MQ=255) cgGCTGATCGTGGTTACACCAGAACAAGGCATTCCATGCTACGTTGTGCATTCCTTGTTGCCAGTGGCGGAACAATGGTTTCCACGCCACAAAGTCCGGTTTAGCCAGCGTCCATTTTTCACCACCGGGATAATCGACCTTCCGGTGATGAAAATTAAAGGCCATCGCCAATTACCTGCCTGTAAAAGCCGCGTATCCCTGGCAATGCTCAAGGTTGGGGGGGAACATTTACCCTCCGGTCATTACCCcgc > 2:176399/1‑251 (MQ=255) gCTGATCGTGGTTACACCAGAACAAGGCATTCCATGCTACGTTGTGCATTCCTTGTTGCCAGTGGCGGAACAATGTTTTCAACGCCACAAAGTCAGGTTTAGCCAGCGGCCATTTTTCACCACCGGGATAATCGACCTTCAGGTGATGAAAATTAAAGGTCATCGACAATTCACTGCCTGTCAGAGCCGCGTATCGCTGGCAATGCTCAAGGCTGGTGGAGAACATTTCACCTACGGTCATTAACCCGCGt < 1:437328/251‑1 (MQ=255) gCTGATCGTGGTTACACCAGAACAAGGCATTCCATGCTACGTTGTGCATTCCTTGTTGCCAGTGGCGGAACAATGTTTTCAAAGCCACAAAGTCAGGTTTAGCCAGCGTCCATTTTTAACCACCGGGATAATCGACCTTCAGGTGATGAAAATTAAAGGTCATCGACAATTCAATGCCTGTCAGAGCCGCGTATCGCTTGCAATGCTCAAGGCTGGTGGAGAAAATTTCAACTACGGGAATTAACCCACGt > 1:323225/1‑251 (MQ=255) ggTTACACCAGAACAAGGCTTTCCATGCTACGTTGTGCATTCCTTGTTGCCAGTGGCGGAACAATGTTTTCAACGCCACAAAGTCAGGTTTAGCCAGCGTCCATTTTTCACCACCGGGATAATCGACCTTCAGGTGATGAAAATTAAAGGTCATCGACAATTCACTGCCTGTCAGAGCCGCGTATCGCTGGCAATGCTCAAGGCTGGTGGAGGACATTTCACCTACGGTCATTAACCCGCGTGGCGTAAac < 2:382228/251‑1 (MQ=255) cAGAACAAGGCATTCCATGCTACGTTGTGCATTCCTTGTTGCCAGTGGCGGAACAATGTTTTCAACGCCACAAAGTCAGGTTTAGCCAGCGTCCATTTTTCACCACCGGGATAATCGACCTTCAGGTGATGAAAATTAAAGGTCATCGACAATTCACTGCCTGTCAGAGCCGCGTATCGCTGGCAATGCTCAAGGCTGGTGGAGAACATTTCACCTACGGTCATTAACCCGCGTGGCGTAAACACATcgcg < 2:443376/251‑1 (MQ=255) cATTCCATGCTACGTTGTGCATTTCGTGTTGCCAGTGGCGTAACAATGTTGTCAACGCCACAAAGTCAGGTTTAGCCAGCGTCCATTTTTCACCACCGGGATAATCGACCTGCAGGTGATGAAAATTAAAGGTCATCGACAATTCACTGCCTGTCAGAGCCGCGTAGCGCTGGCAATGCTCAAGGCTGGTGGAGAACATTTCACCTACGGTCATTAACCCGCGTGGCGTAAACACATCTCGGTTCATCTCg < 2:216330/251‑1 (MQ=255) tCCATGCTACGTTGTGCATTCCTGGTTGCCAGTGGCGGAACAATGTTTTCAACGCCACAAAGTCAGGTTTAGCCAGCGTCCATTTTTCACCACCGGGATAATCGACCTTCAGGTGATGAAAATTAAAGGTCATCGACAATTCACTGCCTGTCAGAGCCGCGTATCGCTGGCAATGCTCAAGGCTGGTGGAGAACATTTCACCTACGGTCATTAACCCGCGTTGCGTAAACACATCGCGGTTCATCTCGTg < 2:378785/250‑1 (MQ=255) ccATGCTACGTTGTGCATTCCTTGTTGCCAGTGGCGGAACAATGTTTTCAACGCCACAAAGTCAGGTTTAGCCAGCGTCCATTTTTCACCACCGGGATAATCGACCTTCAGGTGATGAAAATTAAAGGTCATCGACAATTCACTGCCTGTCAGAGCCGCGTATCGCTGGCAATGCTCAAGGCTGGTGGAGAACATTTCACCTACGGTCATTAACCCGCGTGGCGTAAACACATCGCGGTTCATCTCGTGCa < 2:206554/251‑1 (MQ=255) aTGCTACGTTGTGCATTCCTTGTTGCCAGTGGCGGAACAATGTTTTCAACGCCACAAAGTCAGGTTTAGCCAGCGTCCATTTTTCACCACCGGGATAATCGACCTTCAGGTGATGAAAATTAAAGGTCATCGACAATTCACTGCCTGTCAGAGCCGCGTATCGCTGGCAATGCTCAAGGCTGGTGGAGAACATTTCACCTACGGTCATTAACCCGCGTGGCGTAAACACATCGCGGTTCATCTCGTGCaaa < 1:145145/251‑1 (MQ=255) tACGTTGTGCATTCCTTGTTGCCAGTGGCGGAACAATGTTTTCAACACCACAAAATCAGGGTTAGCCAGCCTCCATTTTTCACCACCCGGATAATCGACCTTCAGGTGATGAAAATTAAAGGGCATCGACAATTCACTGCCTGTCAGAGCCGCGTATCGCTGGCAATGCTCAAGGCTGGGGGAGAACATTTCACCTTCGGTCATTAACCCGCGTGGCGTAAACACATCGCGGTTCATCTCGTGCAAAAACt > 1:149289/1‑251 (MQ=255) cGTTGTGCATTCCTTGTTGCCAGTGGCGGAACAATGTTTTCAACGCCACAAAGTCAGGTTTAGCCAGCGTCCATTTTTCACCACCGGGATAATCGACCTTCAGGTGATGAAAATTAAAGGTCATCGACAATTCACTGCCTGTCAGAGCCGCGTATCGCTGGCAATGCTCAAGGCTGGTGGAGAACATTTCACCTACGGTCATTAACCCGCGTGGCGTAAACACATCGCGGTTCATCTCGTGCAAAAACTCg < 1:264761/251‑1 (MQ=255) gCATTCCTTGTTGCCAGTGGCGGAACAATGTTTTCAACGCCACAAAGTCAGGTTTAGCCAGCGTCCATTTTTCACCACCGGGATAATCGACCTTCAGGTGATGAAAATTAAAGGTCATCGACAATTCACTGCCTGTCAGAGCCGCGTATCGCTGGCAATGCTCAAGGCTGGTGGAGAACATTTCACCTACGGTCATTAACCCGCGTGGCGTAAACACATCGCGGTTCATCTCGTGCAAAAACTCGTGTGCt < 1:483732/251‑1 (MQ=255) gCCAGGGGCGGAACAATGTTTTCAACGCCACAAAGTCAGGTTTAGCCAGCGTCCATTTTTCACCACCGGGATAATCGACCTTCAGGTGATGAAAAATAAAGGTCATCGACAATTCACTGCCTGTCAGAGCCGCGTATCGCTGGCAATGCTCAAGGCTGGTGGAGAACATTTCACCTACGGTCATTAACCCGCGTGGCGTAAACACATCGCGGTTCATCTCGTGCAAAAACTCGTGTGCTCGTGGCCCGTc < 1:176399/250‑1 (MQ=255) gTGGCGGAACAATGTTTTCAACGCCACAAAGTCAGGTTTAGCCAGCGTCCATTTTTCACCACCGGGATAATCGACCTTCAGGTGATGAAAATTAAAGGTCATCGACAATTCACTGCCTGTCAGAGCCGCGTATCGCTGGCAATGCTCAAGGCTGGTGGAGAACATTTCACCTACGGTCATTAACCCGCGTGGCGTAAACACATCGCGGTTCATCTCGTGCAAAAACTCGTGTGCTCGTGGCCCGTCGgtgt < 1:29841/251‑1 (MQ=255) aaTGTTTTCAACGCCACAAAGTCAGGTTTAGCCAGCGTCCATTTTTCACCACCGGGATAATCGACCTTCAGGTGATGAAAATTAAAGGTCATCGACAATTCACTGCCTGTCAGAGCCGCGTATCGCTGGCAATGCTCAAGGCTGGTGGAGAACATTTCACCTACGGTCATTAACCCGCGTGGCGTAAACACATCGCGGTTCATCTCGTGCAAAAACTCGTGTGCTCGTGGCCCGTCGGTGTAGAAGCGACg < 1:132652/251‑1 (MQ=255) aTGTTTTCAACGCCACAAAGTCAGGTTTAGCCAGCGTCCATTTTTCACCACCGGGATAATCGACCTTCAGGTGATGAAAATTAAAGGTCATCGACAATTCACTGCCTGTCAGAGCCGCGTATCGCTGGCAATGCTCAAGGCTGGTGGAGAACATTTCACCTACGGTCATTAACCCGCGTGGCGTAAACACATCGCGGTTCATCTCGTGCAAAAACTCGTGTGCTCGTGGCCCGTCGGTGTAGAAGCGACGc > 1:135314/1‑251 (MQ=255) ttCAACGCCACAAAGTCAGGTTTAGCCAGCGTCCATTTTTCACCACCGGGATAATCGACCTTCAGGTGATGAAAATTACAGGTCATCGACAATTCACTGCCTGTCAGAGCCGCGTATCGCTGGCAATGCTCAAGGCTGGTGGAGAACATTTCACCTACGGTCATTAACCCGCGTGGCGTAAACACATCGCGGTTCATCTCGTGCAAAAACTCGTGTGCTCGTGGCCCGTCGGTGTAGAAGCGACGCCCGTc > 1:484468/1‑251 (MQ=255) ccACAAAGTCAGGTTTAGCCAGCGTCCATTTTTCACCACCGGGATAATCGACCTTCAGGTGATGAAAATTAAAGGTCATCGACAATTCACTGCCTGTCAGAGCCGCGTATCGCTGGCAATGCTCAAGGCTGGTAGAGAAAATTTCACCTACGGTCATTACCCCGCGTGGCGTAAACACATCGCGGATAATCTCGTACAAAACCTCGCGTGCTCGTGGCCCGTCGGTGTAGAAGCCACGCCCGTCGCCGTcc > 1:437834/1‑251 (MQ=255) cacaAAGTCAGGTTTAGCCAGCGTCCATTTTTCACCACCGGGATAACCGACCTTCAGGTGATGAAAATTAAAGGTCATCGACAATTCACTGCCTGTCAGAGCCGCGTATCGCTGGCAATGCTCAAGGCTGGTGGAGAACATTTCACCTACGGTCATTAACCCGCGTGGCGTAAACACATCGCGGTTCATCTCGTGCAAAAACTCGTGTGCTCGTGGCCCGTCGGTGTAGAAGCGACGCCCGTCGCCGTCCa < 1:186163/251‑1 (MQ=255) aaaGTCAGGTTTAGCCAGCGTCCATTTTTCACCACCGGGATAATCGACCTTCAGGTGATGAAAATTAAAGGTCATCGACAATTCACTGCCTGTCAGAGCCGCGTATCGCTGGCAATGCTCAAGGCTGGTGGAGAACATTTCACCTACGGTCATTAACCCGCGTGGCGTaa < 2:409788/170‑1 (MQ=255) aaaGTCAGGTTTAGCCAGCGTCCATTTTTCACCACCGGGATAATCGACCTTCAGGTGATGAAAATTAAAGGTCATCGACAATTCACTGCCTGTCAGAGCCGCGTATCGCTGGCAATGCTCAAGGCTGGTGGAGAACATTTCACCTACGGTCATTAACCCGCGTGGCGTaa > 1:409788/1‑170 (MQ=255) tAGCCAGCGTCCATTTTTCACCACCGGGATAATCGACCTGTAGGTGATTAAAATTAAAGGTCATCTACAATTCACTGCCTGTCAGAGCCGCGTATCGCTGGCAATGCGCAAGGCTGGTGGAGAACATTTCACCTACGGTCATTAACCCGCGTGGCGTAAACACATCGCGGTTCATCTCGTGCAAAAACTCGTGTGCTCGTGGCCCGTCGGTGTAGAAGCGACGCCCGTCGCCGTCCAGGTCTTCAGGGaa < 2:448284/250‑1 (MQ=255) ccAGCGTCCATTTTTCACCACCGGGATAATCGACCTTCAGGTGATGAAAATTAAAGGTCATCGACAATTCACTGCCTGTCAGAGCCGCGTATCGCTGGCAATGCTCAAGGCTGGTGGAGAACATTTCACCTACGGTCATTAACCCGCGTGGCGTAAACACATCGCGGTTCATCTCGTGCAAAAACTCGTGTGCTCGTGGCCCGTCGGTGTAGAAGCGACGCCCGTCGCCGTCCAGGTCTTCAGGGAAAcgc > 1:219547/1‑251 (MQ=255) aGCGTCCATTTTTCACCACCGGGATAATCGACCTTCAGGTGATGAAAATTAAAGGTCATCGACAATTCACTGCCTGTCAGAGCCGCGTATCGCTGGCAATGCTCAAGGCTGGTGGAGAACATTTCACCTACGGTCATTAACCCGCGTGGCGTAAACACATCGCGGTTCATCTCGTGCAAAAACTCGTGTGCTCGTGGCCCGTCGGTGTAGAAGCGACGCCCGTCGCCGCCCAGGTCTTCAGGGAAACGCgg > 1:354350/1‑251 (MQ=255) aTCGACCTTCAGGTGATGAAAATTAAAGGTCATCGACAATTCACTGCCTGTCAGAGCCGCGTATCGCTGGCAATGCTCAAGGCTGGTGGAGAACATTTCACCTACGGTCATTAACCCGCGTGGCGTAAACACATCGCGGTTCATCTCGTGCAAAAACTCGTGTGCTCGTGGCCCGTCGGTGTAGAAGCGACGCCCGTCGCCGTCCAGGTCTTCAGGGAAACGCGGGTCTTTGGAGATCAGATTCACCACAt > 1:161633/1‑251 (MQ=255) tgatgaAAATTAAAGGTCATCGACAATTCACTGCCTGTCAGAGCCGCGTATCGCTGGCAATGCTCAAGGCTGGTGGAGAACATTTCACCTACGGTCATTAACCCGCGTGGCGTAAACACATCGCGGTTCATCTCGTGCAAAAACTCGTGTGCTCGTGGCCCGTCGGTGTAGAAGCGACg < 2:457597/179‑1 (MQ=255) tgatgaAAATTAAAGGTCATCGACAATTCACTGCCTGTCAGAGCCGCGTATCGCTGGCAATGCTCAAGGCTGGTGGAGAACATTTCACCTACGGTCATTAACCCGCGTGGCGTAAACACATCGCGGTTCATCTCGTGCAAAAACTCGTGTGCTCGTGGCCCGTCGGTGTAGAAGCGACg > 1:457597/1‑179 (MQ=255) aaaaTTAAAGGTCATCGACAATTCACTGCCTGTCAGAGCCGCGTATCGCTGGCAATGCTCAAGGCTGGTGGAGAACATTTCACCTACGGTCATTAACCCGCGTGGCGTAAACACATCGCGGTTCATCTCGTGCAAAAACTCGTGTGCTCGTGGCCCGTCGGTGTAGAAGCGACGCCCGTCGCCGTCCAGGTCTTCAGGGAAACGCGGGTCTTTGGAGATCAGATTCACCACATCCAGGCGCAACCCGTCg > 1:394363/1‑250 (MQ=255) ttAAAGGTCATCGACAATTCACTGCCTGTCAGAGCCGCGTATCGCTGGCAATGCTCAAGGCTGGTGGAGAACATTTCACCTACGGTCATTAACCCGCGTGGCGTAAACACATCGCGGTTCATCTCGTGCAAAAACTCGTGTGCTCGTGGCCCGTCGGTGTAGAAGCGACGCCCGTCGCCGTCCAGGTCTTCAGGGAAACGCGGGTCTTTGGAGATCAGATTCACCACATCCAGGCGCAACCCGTCGAcccc > 2:114260/1‑251 (MQ=255) ggTCATCGACAATTAACTGCCTGTCAGAGCCGCGTATCGCTGGCAATGCTCAAGGCTGGTGGAGAACATTTCACCTACGGTCATTAACCCGCGTGGCGTAAACACATCGCGGTTCATCTCGTGCAAAAACTCGTGTGCTCGTGGCCCGTCGGTGTAGAAGCGACGCCCGTCGCCGTCCAGGTCTTCAGGGAAACGCGGGTCTTTGGAGATCAGATTCACCACATCCAGGCGACACCCGTCGAccccccgg > 2:421992/1‑246 (MQ=255) tCATCGACAATTCACTGCCTGTCAGAGCCGCGTATCGCTGGCAATGCTCAAGGCTGGTGGAGAACATTTCACCTACGGTCATTAACCCGCGTGGCGTAAACACATCGCGGTTCATCTCGTGCAAAAACTCGTGTGCTCGTGGCCCGTCGGTGTAGAAGCGACGCCCGTCGCCGTCCAGGTCTTCAGGGAAACGCGGGTCTTTGGAGATCAGATTCACCACATCCAGGCGCAACCCGTCGACCCCACGATCg > 1:283653/1‑251 (MQ=255) ggtaaTTCACTGCCTGTCAGAGCCGCGTATCGCTGGCAATGCTCAAGGCTGGTGGAGAACATTTCACCTACGGTCATTAACCCGCGTGGCGTAAACACATCGCGGTTCAGCTCGTGCAAAAACTCGTGTGCTCGTGGCCCGTCGGTGTAGAAGCGACGCCCGTCGCCGTCCAGGTCTTCAGGGAAACGCGGGTCTTTGGAGATCAGACTCACCACATCCAGGCGCAACCCGTCGACCCCACGATCGGCCCa < 2:480346/248‑1 (MQ=255) gACAATTCACTGCCTGTCAGAGCCGCGTATCGCTGGCAATGCTCAAGGCTGGTGGAGAACATTTCACCTACGGTCATTAACCCGCGTGGCGTAAACACATCGCGGTTCATCTCGTGCAAAAACTCGTGTGCTCGTGGCCCGTCGGTGTAGAAGCGACGCCCGTCGCCGTCCAGGTCTTCAGGGAAACGCGGGTCTTTGGAGATCAGATTCACCACATCCAGGCGCAACCCGTCGACCCCACGATCGGcccc > 1:273780/1‑250 (MQ=255) aaTTCACTGCCTGTCAGAGCCGCGTATCGCTGGCAATGCTCAAGGCTGGTGGAGAACATTTCACCTACGGTCATTAACCCGCGTGGCGTAAACACATCGCGGTTCATCTCGTGCAAAAACTCGTGTGCTCGTGGCCCGTCGGTGTAGAAGCGACGCCCGTCGCCGTCCAGGTCTTCAGGGAAACGCGGGTCTTTGGAGATCAGATTCACCACATCCAGGCGCAACCCGTCGACCCCACGATCGGCCCAGa > 1:350710/1‑250 (MQ=255) aaTTCACTGCCCGGCAGAGCCGCGTTTCGCTGGCAATGCTCAAGGCTGGTGGAGAACATTTCACCTACGGTCATTAACCCGCGTGGCGTAAACACATCGCGGTTCATCTCGTGCAAAAACTCGTGTGCTCGTGGCCCGTCGGTGTAGAAGCGACGCCCGTCGCCGTCCAGGTCTTCAGGGAAACGCGGGTCTTTGGAGATCAGATTCACCACAGCCAGGCGCAACCCGTCGACCCCACGATCGGTCCAGaa < 2:54831/251‑1 (MQ=255) cACTGCCTGTCAGAGCCGCGTATCGCTGGCAATGCTCAAGGCTGGTGGAGAACATTTCACCTACGGTCATTAACCCGCGTGGCGTAAACACATCGCGGTTCATCTCGTGCAAAAACTCGTGTGCTCGTGGCCCGTCGGTGTAGAAGCGACGCCCGTCGCCGTCCAGGTCTTCAGGGAAACGCGGGTCTTTGGAGATCAGATTCACCACATCCAGGCGCAACCCGTCGACCCCACGATCGGCCCAGAACTca < 1:215284/251‑1 (MQ=255) ccTGTCAGAGCCGTGTATCGCTGGCAATGCTCAAGGCTGGTGGAGAACATTTCACCTACGGTCATTAACCCGCGTGGCGTAAACACATCGCGGTTCATCTCGTGCAAAAACTCGTGTGCTCGTGGCCCGTCGGTGTAGAAGCGACGCCCGTCGCCGTCCAGGTCTTCAGGGAAACGCGGGTCTTTGGAGATCAGATTCACCACATCCAGGCGCAACCCGCCGACCCCACGATCGGCCCAGAACTCACAGAc < 1:106241/251‑1 (MQ=255) cTGTCAGAGCCGCGTATCGCTGGCAATGCTCAAGGCTGGTGGAGGACATTTCACCTACGGTCATTAACCCGCGTGGCGTAAACACATCGCGGTTCATCTCGTGCAAAAACTCGTGTGCTCGTGGCCCGTCGGTGTAGAAGCGACGCCCGTCGCCGTCCAGGTCTTCAGGGAAACGCGGGTCTTTGGAGATCAGATTCACCACATCCAGGCGCAACCCGTCGACCCCACGATCGGCCCAGAACTCACAGACt > 1:236384/1‑251 (MQ=255) gTCATAGCCGCGTATCGCTGGCCATGCTCAAGGGTGGTGTAGAACATGTCACCTACGGTCATTAGCCCGCGTGGCGTATACCCATCGCGGGTCATCTCGTGCAAAAACGCGTGTGCTCGTGGCCCGGCGGTGTAGAAGCGACGCCCGTCGGCGGCCAGGTTTTCAGGGAAGCGCGGGTCTTTGGAGATCAGATTCACCACATCCGTGCGCAACCCGTCGTCCCCACGATCGGCCCAGAACTCACAGACt < 2:288137/249‑1 (MQ=255) tCAGAGCCGCGTATCGCTGGCAATGCTCAAGGCTGGTGGAGAACATTTCACCTACGGTCATTAACCCGCGTGGCGTAAACACATCGCGGTTCATCTCGTGCAAAAACTCGTGTGCTCATGGCCCGTCGGTGTAGAAGCGACGCCCGTCGCCGTCCAGGTCTTCAGGGAAACGCGGGTCTTTGGAGATCAGATTCACCACATCCAGGCGCAACCCGTCGACCCCACGATCGGCCCAGAACACACAGACtttt > 1:197670/1‑251 (MQ=255) cAGAGCCGCGTATCGCTGGCAATGCTCAAGGCTGGTGGAGAACATTTCACCTACGGTCATTAACCCGCGTGGCGTAAACACATCGCGGTTCATCTCGTGCAAAAACTCGTGTGCTCGTGGCCCGTCGGTGTAGAAGCGACGCCCGTCGCCGTCCAGGTCTTCAGGGAAACGCGGGTCTTTGGAGATCAGATTCACCACATCCAGGCGCAACCCGTCGACCCCACGATCGGCCCAGAACTCACAGACtttt < 1:114260/250‑1 (MQ=255) agagCCGCGTATCGCTGGCAATGCTCAAGGCTGGAGGAGAACATTTCACCTACGGTCATTAACCCGCGTGGCGTAAACACATCGCGGTTCATCTCGTGCAAAAACTCGTGTGCTCGTGGCCCGTCGGTGTAGAAGCGACGCCCGTCGCCGTCCAGGTCTTCAGGGCAACGCGGGTCTTTGGAGATCAGATTCACCACATCCAGGCGCAACCCGTCGACCCCCCGATCGGCCCGGAACTCACAGACtttttt > 1:316378/1‑251 (MQ=255) gagCCGCGTATAGCTGGCAATGCTCAAGGCTGGTGGCGAACATTTCACCTACGGTCATTAACCCGCGTGGCGTAAACACATCGCGGTTCATCTCGTGCAAAAACTCGTGTGCTCGTGGCCCGTCGGTGTAGAAGCGACGCCCGTCGCCGTCCAGGTCTTCAGGGAAACGCGGGTCTTTGGAGATCAGATTCACCCCATCCCGGCGCAACCCGTCGACCCCCCGCTCGGCCCCGAACTCACAGACTTTTTTc > 2:291647/1‑251 (MQ=255) agCCGCGTATCGCTGGCAATGCTCAAGGCTGGTGGAGAACATTTCACCTACGGTCATTAACCCGCGTGGCGTAAACACATCGCGGTTCATCTCGTGCAAAAACTCGTGTGCTCGTGGCCCGTCGGTGTAGAAGCGACGCCCGTCGCCGTCCAGGTCTTCAGGGAAACGCGGGTCTTTGGAGATCAGATTCACCACATCCAGGCGCAACCCGTCGACCCCACGATCGGCCCAGAACTCACAGACTTTTTTCa < 1:141566/251‑1 (MQ=255) ccGCGTATCGCTGGCAATGCTCAAGGCTGGTGGAGAACATTTCACCTACGGTCATTAACCCGCGTGGCGTAAACACATCGCGGTTCATCTCGTGCAAAAACTCGTGTGCTCGTGGCCCGTCGGTGTAGAAGCGACGCCCGTCGCCGTCCAGGTCTTCAGGGAAACGCGGGTCTTTGGAGATCAGATTCACCACATCCAGGCGCAACCCGTCGACCCCACGATCGGCCCAGAACTCACAGCCTTTTTTCAGc > 2:229313/1‑251 (MQ=255) gaatcccTGGCAATTCTCAAGGCTGGTAGAGAACATGTCACCTCCGGTCATTAGCCCGCGTGTCGTAAACACACCGCTGTTCATCTCGTGCAAAACCTCGTGTGCTCGTGGCCCGTCGGTGTAGAAGCGACGCCCGTCGCCGTCCAGGTCTTCAGGGAAACGCGGGTCTTTGGAGATCTGATTCACCACATCCAGGCGCATCCCGTCGACCCCACTATCTGCCCAGATCTTACAGACTTTTTGCAGctcgg < 2:324917/245‑3 (MQ=255) tATCGCTGGCAATGCTCAAGGCTGGTGGAGAACATTTCACCTACGGTCATTAACCCGCGTGGCGTAAACACATCGCGGTTCATCTCGTGCAAAAACTCGTGTGCTCGTGGCCCGTCGGTGTAGAAGCGACGCCCGTCGCCGTCCAGGTCTTCAGGGAAACGCGGGTCTTTGGAGCTCAGATTCACCACATCCAGGCGAAACCCGTCGACCCCACGATCGGCCCAGAACTCCCAGACTTTTTTCAGCTCTgc > 2:449221/1‑251 (MQ=255) aTCGCTGGCAATGCTCAAGGCTGGTGGAGAACATTTCACCTACGGTCATTAACCCGCGTGGCGTAAACACATCGCGGTTCATCTCGTGCAAAAACTCGTGTGCTCGTGGCCCGTCGGTGTAGAAGCGACGCCCGTCGCCGTCCAGGTCTTCAGGGAAACGCGGGTCTTTGGAGATCAGATTCACCACATCCAGGCGCAACCCGTCGACCCCACGATCGGCCCAGAACTCACAGACTTTTTTCAGCTCTgcg < 2:149289/251‑1 (MQ=255) cTGGCAATGCTCAAGGCTGGTGGAGAACATTTCACCTACGGTCATTAACCCGCGTGGCGTAAACACATCGCGGTTCATCTCGTGCAAAAACTCGTGTGCTCGTGGCCCGTCGGTGTAGAAGCGACGCCCGTCGCCGTCCAGGTCTTCAGGGAAACGCGGGTCTTTGGAGATCAGATTCACCACATCCAGGCGCAACCCGTCGACCCCACGATCGGCCCAGAACTCACAGACTTTTTTCAGCTCTGCGCGt > 1:48008/1‑250 (MQ=255) aaTGCTCAAGGCTGGTGGAGAACATTTCACCTACGGTCATTAACCCGCGTGGCGTAAACACATCGCGGTTCATCTCGTGCAAAAACTCGTGTGCTCGTGGCCCGTCGGTGTAGAAGCGACGCCCGTCGCCGTCCAGGTCTTCAGGGAAACGCGGGTCTTTGGAGATCAGATTCACCACATCCAGGCGCAACCCGTCGACCCCCCGATCGGCCCAGAACTCACAGACTTTTTTCAGCTCTGCGCGTACCGCt > 1:405945/1‑251 (MQ=255) aaTGCTCAAGGCTGGTGGAGAACATTTCACCTACGGTCATTAACCCGCGTGGCGTAAACACATCGCGGTTCATCTCGTGCAAAAACTCGTGTGCTCGTGGCCCGTCGGTGTAGAAGCGACGCCCGTCGCCGTCCAGGTCTTCAGGGAAACGCGGGTCTTTGGAGATCAGATTCACCACATCCAGGCGCAACCCGTCGACCCCACGATCGGCCCAGAACTCACAGACTTTTTTCATCTCTGCGCGTTCCGCt < 2:165039/251‑1 (MQ=255) cAAGGCTGGTGGAGAACATTTCACCTACGGTCATTAACCCGCGTGGCGTAAACACATCGCGGTTCATCTCGTGCAAAAACTCGTGTGCTCGTGGCCCGTCGGTGTAGAAGCGACGCCCGTCGCCGTCCAGGTCTTCAGGGAAACGCGGGTCTTTGGAGATCAGATTCACCACATCCAGGCGCAACCCGTCGACCCCACGATCGGCCCAGAACTCACAGACTTTTTTCAGCTCTGCGCGTACCGCTGGAtt < 1:449221/250‑1 (MQ=255) ggtggAGAACATTTCACCTACGGTCATTAACCCGCGTGGCGTAAACACATCGCGGTTCATCTCGTGCAAAAACTCGTGTGCTCGTGGCCCGTCGGTGTAGAAGCGACGCCCGTCGCCGTCCAGGTCTTCAGGGAAACGCGGGTCTTTGGAGATCAGATTCACCACATCCAGGCGCAACCCGTCGACCCCACGATCGGCCCAGAACTCACAGACTTTTTTCAGCTCTGCGCGTACCGCTGGATTCTCCCa < 1:456369/249‑1 (MQ=255) ggtggAGAACATTTCACCTACGGGCATTAACCCGCGTGGCGTAAACACATCGCGGTTCATCTCGTGCAAAAACTCGTGTGCTCGTGGCCCGTCGGTGTAGAAGCGACGCCCGTCGCCGTCCAGGTCTTCAGGGAAACGCGGGTCTTTGGAGATCAGATTCACCACATCCAGGCGCAACCCGTCGACCCCACGATCGGCCCAGAACTCACAGACTTTTTTCAGCTCTGCGCGTACCGCTGGATTCTCCCa < 2:280830/249‑1 (MQ=255) | ATCACCAAAGCGAGAAACAATGCGCGGCTGATCGTGGTTACACCAGAACAAGGCATTCCATGCTACGTTGTGCATTCCTTGTTGCCAGTGGCGGAACAATGTTTTCAACGCCACAAAGTCAGGTTTAGCCAGCGTCCATTTTTCACCACCGGGATAATCGACCTTCAGGTGATGAAAATTAAAGGTCATCGACAATTCACTGCCTGTCAGAGCCGCGTATCGCTGGCAATGCTCAAGGCTGGTGGAGGACATTTCACCTACGGTCATTAACCCGCGTGGCGTAAACACATCGCGGTTCATCTCGTGCAAAAACTCGTGTGCTCGTGGCCCGTCGGTGTAGAAGCGACGCCCGTCGCCGTCCAGGTCTTCAGGGAAACGCGGGTCTTTGGAGATCAGATTCACCACATCCAGGCGCAACCCGTCGACCCCACGATCGGCCCAGAACTCACAGACTTTTTTCAGCTCTGCGCGTACCGCTGGATTCTCCCA > NC_000913/4463705‑4464193 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |