| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,344,935 | G→A | T208T (ACC→ACT) | yjdF ← | DUF2238 domain‑containing inner membrane protein YjdF |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,344,935 | 0 | G | A | 93.7% | 178.1 / 2.1 | 63 | T208T (ACC→ACT) | yjdF | DUF2238 domain‑containing inner membrane protein YjdF |
| Reads supporting (aligned to +/- strand): ref base G (3/1); new base A (32/27); total (35/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.22e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.06e-01 | |||||||||||
GGATCCAGATCCATCTGCTGGATAAATATCGCAAAGTACCGCCCGAGCCTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCA‑GGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATGCGCCAAGCAGCGCGCAGAACATATCGGATTGCGTGTCCCACTGGTCGCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGC > NC_000913/4344693‑4345181 | ggATCCAGCACCATCTGCTGGATAAATATCGCAAAGTACCGCCCGAGCCTGTTCATGCTGATATTGCGGTCGGTGCAGTGCGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAACTGGACTGATGCGATATGTTTATCA‑GGCCACGCCTTAATGAAATGCTTTGGATTTGCAACTTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGCTGTTATCCAGTTATCa > 2:243363/1‑250 (MQ=255) atccaTCTGCTGGATAAATATCGCAAAGTACCGCCCGAGCCTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCA‑GGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAgc < 1:395277/251‑1 (MQ=255) tccaTCTGCTGGATAAATATCGCAAAGTACCGCCCGAGCCTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCA‑GGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAAAgcg > 2:12908/1‑251 (MQ=255) ggATAAATATCGCAAAGTACCGCCCGAGCCTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCA‑GGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAAAGCGCCGTAGCTgg > 1:279988/1‑251 (MQ=255) cGCAAAGTACCGCCCGAGCCTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCA‑GGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGaa < 1:12908/251‑1 (MQ=255) cccGCCCGAGCCTGTTCATGCTGATTTTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCA‑GGCCACGTCTTAATGTAATGCTTTTGATTTGTAAATGTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAAAGCGCCGTATCTGGCGGCAATGAAagcgagcg < 2:42690/250‑1 (MQ=255) aCCGCCCGAGCCTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCA‑GGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAagcgagcg > 1:247122/1‑251 (MQ=255) gCCCGAGCCTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCA‑GGCCACGTCTTAATGAAATGCTTTGGATTTGCAAACTTTGTAGCCCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAgg < 1:278696/251‑1 (MQ=255) gAGCCTTTTCATGCGGAAATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCA‑GGCCACGTCTCAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTGATCCAGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAagcgag < 2:54050/242‑1 (MQ=255) gAGCCTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCA‑GGCCACGTCTCAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAagcgag > 1:54050/1‑242 (MQ=255) gTTCTTGCTGATATTCCGGTCGTTGCAGGGATTTATGTGAAAGCCTTACGTGGACAATTGCTAACGAAAATGGCCTGATGCGATATGTTTATCA‑GGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCAc < 2:350013/249‑1 (MQ=255) gCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCA‑GGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGtt > 2:119356/1‑250 (MQ=255) attacccGGTTGGTGCAGTGAGCGATGGAAAAGCGTGTCGTAGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCA‑GGCCACGTCTTAATGTAAAGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGTAAGCGAGCGAGGAATATCACCGTCGTTAATgc < 2:344753/246‑1 (MQ=255) tCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCA‑GGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATGCGcc > 2:24483/1‑250 (MQ=255) cggtcggtGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCA‑GGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATGCGCCAag < 1:306986/251‑1 (MQ=255) gtGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCA‑GGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATGCGCCAAGCAgcgc > 1:76328/1‑251 (MQ=255) gtGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCA‑GGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATGCGCCAAGCAgcgc < 2:182587/251‑1 (MQ=255) gtGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCA‑GGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATGCGCCAAGCAgcgc > 1:62463/1‑251 (MQ=255) tgaTGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCA‑GGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATGCGCCAAGCAGCGCGCAGAACat > 1:324489/1‑250 (MQ=255) gaTGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCA‑GGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATGCGCCAAGCAGCGCGCAGAACatat < 1:47464/251‑1 (MQ=255) gaTGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGAGATGTTTATCA‑GGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATGCGCCAAGCAGCGCGCAGAACatat < 1:405762/251‑1 (MQ=255) ccTGACGTGGACAATAGCTAACGAAAGTGGCCTGATGCGATATGTTTATCA‑GGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTAGTTAATGCGCCAAGCAGCGCGCAGAACATATCGGATTGCgt > 1:139006/1‑251 (MQ=255) gTGGACAATAGCTAACGACAATGGCCTGATGCGATATGTTTATCA‑GGCCACGACTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGACGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATGCGCCCAGCAGCGCGCAGAACATATCGGATAGCGTGTccc > 1:184797/1‑250 (MQ=255) ggACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCA‑GGCCACGTCTTAATGTAATGCTTGGGATTTTCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATGCGCCAAGCAGCGCGCAGAACATATCGGATTGCGTGTCCCACt < 1:471803/251‑1 (MQ=255) gACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCA‑GGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATGCGCCAAGCAGCGCGCAGAACATATCGGATTGCGTGTCCCACTg > 2:97132/1‑251 (MQ=255) aTAGCTAACGAAAATGGCCTGATGCGATATGTTTATCA‑GGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATGCGCCAAGCAGCGCGCAGAACATATCGGATTGCGTGTCCCCCTGGTCg > 2:13107/1‑251 (MQ=255) gCTAACGAAAATGGCCTGATGCGATATGTTTATCA‑GGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATGCGCCAAGCAGCGCGCAGAACATATCGGATTGCGTGTCCCACTGGTCGccc > 2:452185/1‑251 (MQ=255) tAACGAAAATGGCCTGATGCGATATGTTTATCA‑GGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATACGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAACGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGCCGTTAATGCGCCAAGCAGCGCGCAGAACATATCGGATTGCGTGTCCCACTGGTCCCCCTg > 2:420266/1‑251 (MQ=255) tAACGAAAATGGCCTGATGCGATATGTTTATCA‑GGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATGCGCCAAGCAGCGCGCAGAACATATCGGATTGCGTGTCCCACTGGTCGCCCTg > 1:377682/1‑251 (MQ=255) cgtGATGCTATATGTTT‑TCAAGGCCACGTATTAAATTAATGCTTTGGATTTTCAAATGTTGTAGACCGGATAAGGAATTCACTCCGCATCCGGCATCAACAAAGCGCAAGGTGTTATCCAGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATGCGCCAAGCAGCGCGCAGAACATATCGGATTGCGTGTCCCACTGGTCGCCCTGGGTGCCGAGaaa < 2:469426/249‑1 (MQ=255) ccTGATGCGATATGTTTATCA‑GGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATGCGCCAAGCAGCGCGCAGAACATATCGGATTGCGTGTCCCACTGGTCGCCCTGGGTGCCGAGaa > 1:165960/1‑250 (MQ=255) aTGCGATATGTTTATCA‑GGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATGCGCCAAGCAGCGCGCAGAACATATCGGATTGCGTGTCCCACTGGTCGCCCTGGGTGCCGAGAAAatc > 1:176598/1‑250 (MQ=255) tGCGATATGTTTATCA‑GGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATGCGCCAAGCAGCGCGCAGAACATATCGGATTGCGTGTCCCACTGGTCGCCCTGGGTGCCGAGAAAatcat > 1:9100/1‑251 (MQ=255) cGATATGTTTATCA‑GGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATGCGCCAAGCAGCGCGCAGAACATATCGGATTGCGTGTCCCACTGGTCGCCCTGGGTGCCGAGAAAATCATcc < 2:196131/251‑1 (MQ=255) atGTTTATCA‑GGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAAt < 1:463103/143‑1 (MQ=255) atGTTTATCA‑GGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAAt > 2:463103/1‑143 (MQ=255) cA‑GGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGTAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATGCGCCAAGCAGCGCGCAGAACATATCGGATTGCGTGTCCCACTGGTCGCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGAcc < 1:368638/250‑1 (MQ=255) aaatgtaatgCTTTGGATTTGCAAAGTTTGTAGCCCGGATAAGGAATTCACGCCGCAGCCGGCATCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAAAGCGCCGTGGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATGCGCCAAGCAGCGCGCAGAACATATCGGATTGCGTGTCCCACTGGTCGCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCt < 2:2656/250‑1 (MQ=255) gtaatgCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGCGGAATATCACCGTCGTTAATGCGCCAAGCAGCGCGCAGCACATATCGGATTGCGTGTCACACTGGTCGCCATGGGTGCCGGGAAAATCATCCTCTCCCTCACCCATTGCCAGCGCAGccc > 2:323229/1‑251 (MQ=255) gCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATGCGCCAAGCAGCGCGCAGAACATATCGGATTGCGTGTCCCACTGGTCGCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCccacca < 1:9883/250‑1 (MQ=255) gCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATGCGCCAAGCAGCGCGCAGAACATATCGGATTGCGTGTCCCACTGGTCGCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCccacca < 2:379349/250‑1 (MQ=255) gCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCACCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATGCGCCAAGCAGCGCGCAGAACATATCGGATTGCGTGTCCCACTGGTCGCCCTGGGTGCCGAGAAAATCATACGCTCCCTGACCCATTGCCAGCGCTGCCcaccac > 1:96343/1‑251 (MQ=255) cTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATGCGCCAAGCAGCGCGCAGAACATATCGGATTGCGTGTCCCACTGGTCGCCCTGGGCGCCGCGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCccaccccc > 2:228814/1‑248 (MQ=255) tGGAGTTGCAAATGTTGTAGACCGGATAAGGAATTCACGCCGCATCCGTCATCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATGCGCCAAGCAGCGCGCAGAACATATCGGATTGCGTGTCCCACTGGTCGCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCg < 2:62463/250‑1 (MQ=255) ggATTTGCAAATTTTGTAGACCGGATCAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATGCGCCAAGCAGCGCGCAGAACATATCGGATTGCGTGTCCCACTGGTCGCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGa < 2:324489/250‑1 (MQ=255) gCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCAGCCGGCATCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATGCGCCAAGCAGCGCGCAGAACATATCGGATTGCGTGTCCCACTGGTCGCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTc < 1:13126/251‑1 (MQ=255) aaTTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATGCGCCAAGCAGCGCGCAGAACATATCGGATTGCGTGTCCCACTGGTCGCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCAt > 1:277515/1‑250 (MQ=255) ttGTAGACCGGATAAGGAATTCACGCCGCATCCGGAATCAACAAAGCGCAAGTTGTTATCCAGTTAGCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATGCGCCAAGCAGCGCGCAGAACATATCGGATTGCGTGTCCCACTGGTCGCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACAt < 2:425414/250‑1 (MQ=255) gTAGACCGGATAAGGGATTAACGCCGCGTCCGGCATCAACAAAGCGCAAGTTGTTATCCAGCTATCACGCCAAAGCGCCGAAGCTGGCGGAAATGGAAGCGACCGAGTCATATCACCGTCGTAAATGCGACAAGCAGCGCGCAGAACATATCGGATTGCGTGTACCACTGGTAGCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCAGTGCCAGCGCTGCCCACCACTCGAATAATTCATAccactc > 2:47685/1‑246 (MQ=255) gTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATGCGCCAAGCAGCGCGCAGAACATATCGGATTGCGTGTCCCACTGGTCGCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATcg < 1:455211/250‑1 (MQ=255) gTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATGCGCCAAGCAGCGCGCAGAACATATCGGATTGCGTGTCCCACTGGTCGCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATcg < 1:206679/250‑1 (MQ=255) aGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAAAGCGCCGTCGCTGGCGGCCATGAAAGCGAGCGAGGAATATCACCGTCGTTAATGCGCCAAGCAGCGCGCAGAACATATCGGATTGCGTGTCCCACTGGTCGCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCACTTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCgcgc > 2:403533/1‑251 (MQ=255) ccGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATGCGCCAAGCAGCGCGCAGAACATATCGGATTGCGTGTCCCACTGGTCGCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCtt > 2:121238/1‑250 (MQ=255) aGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATGCGCCAAGCAGCGCGCAGAACATATCGGATTGCGTGTCCCACTGGTCGCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGcc > 1:263064/1‑249 (MQ=255) gAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATGCGCCAAGCAGCGCGCAGAACATATCGGATTGCGTGTCCCACTGGTCGCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAgcg > 1:144965/1‑251 (MQ=255) cgccgcATCCGGCATCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATGCGCCAAGCAGCGCGCAGAACATATCGGATTGCGTGTCCCACTGGTCGCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACgc > 1:483508/1‑250 (MQ=255) cgccgcATCCGGCATCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATGCGCCAAGCAGCGCGCAGAACATATCGGATTGCGTGTCCCACTGGTCGCCCTGGGTGCCGAGAAAATCAACCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACgca < 1:105802/251‑1 (MQ=255) aTCCGGCATCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATGCGCCAAGCAGCGCGCAGAACATATCGGATTGCGTGTCCCACTGGTCGCCCTGGGTGACGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGAc > 1:26776/1‑251 (MQ=255) agccaaaGTTGTTATCCAGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATGCGCCAAGCAGCGCGCAGAACATATCGGATTGCGTGTCCCACTGGTCGCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATCCATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCAt < 2:346290/246‑1 (MQ=255) gcAAGTTGTTATCCAGTTAGCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATGCGCCAAGCAGCGCGCAGAACATATCGGATTGCGTGTCCCACTGGTCGCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCAtttt < 1:265446/251‑1 (MQ=255) gttgttATCCAGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATGCGCCAAGCAGCGCGCAGAACATATCGGATTGCGTGTCCCACTGGTCGCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGt > 2:361260/1‑251 (MQ=255) ttgttATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATGCGCCAAGCAGCGCGCAGAACATATCGGATTGCGTGTCCCACTGGTCGCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTc > 1:226303/1‑251 (MQ=255) aTCCAGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATGCGCCAAGCAGCGCGCAGAACATATCGGATTGCGTGTCCCACTGGTCGCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCCGCGCCCCGCAGCAGACCAGGAACGCCACCATTTTACGTCcgccc > 2:339815/1‑249 (MQ=255) | GGATCCAGATCCATCTGCTGGATAAATATCGCAAAGTACCGCCCGAGCCTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCA‑GGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATGCGCCAAGCAGCGCGCAGAACATATCGGATTGCGTGTCCCACTGGTCGCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGC > NC_000913/4344693‑4345181 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |