| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,328,622 | T→C | D496D (GAT→GAC) | rdcA → | regulator of diguanylate cyclase RdcA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,328,622 | 0 | T | C | 91.2% | 177.0 / 7.3 | 68 | D496D (GAT→GAC) | rdcA | regulator of diguanylate cyclase RdcA |
| Reads supporting (aligned to +/- strand): ref base T (3/3); new base C (28/34); total (31/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.72e-01 | |||||||||||
CTCGTTGTATGCTCTGCGATCTGCCGCGCATAAACTGTTGAATTACGCGCAGCAGGCGCGGGAATACCTGGATTTTCGTGCGCACGGGTTAAACGTCGCTTGTGAACAATTGCGGCAAAATATCCACCAGATCGAAGAAAGTTTGCAGCTATTGCAACTCAATCAGGCGCAGGTGAGCGGCGAGATTAAACATGAAATCGAGCTGGCCCTGACCTCCGCCAACCACTTTCTGCGTCAACAGCAAGATGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGGATGATTCGGAGCCGTTAAGCGAGATTCGTACCCGCTGTGAGACACTGTTACAGACGGCGCAGAACACCATCAGTC‑GCGACTTTACGCTGCGTTTTGCCGAGCTTGAATCCACCCTTTGCCGGGTGTTAACCGATGTTATTCGCCCCATTGAGCAACAAGTCAAAATGGAATTGAGCGAGTCAGGGTTTCGTCCTGGGTTTCATTTTCCTGTT > NC_000913/4328376‑4328868 | cTCGATGTATGCTCTGCGATCTGCCGCGCATAAACTGTTGAATTACGCGCAGCAGGCGCGGGAATACCTGGATTTTCGTGCGCACGGGTTAAACGTCGCTTGTGAACAATTGCGGCAAAATATCCACCAGATCGAAGAAAGTTTGCAGCTATTGCAACTCAATCAGGCGCAGTTGAGCGGCGAGATTAAACATGAAATCGATCTGGCCCTGACCTCCGCCAACCACTTTCTGCGTCAACAGCAAGACgcgc > 2:151048/1‑251 (MQ=255) tGTATGCTCTGCGATCTGCCGCGCATAAACTGTTGAATTACGCGCAGCAGGCGCGGGAATACCTGGATTTTCGTGCGCACGGGTTAAACGTCGCTTGTGAACAATTGCGGCAAAATATCCACCAGATCGAAGAAAGTTTGCAGCTATTGCAACTCAATCAGGCGCAGGTGAGCGGCGAGATTAAACATGAAATCGAGCTGGCCCTGACCTCCGCCAACCACTTTCTGCGTCAACAGCAAGACGCGCTGa > 1:120570/1‑249 (MQ=255) aTGCTCTGCGATCTGCCGCGCATAAACTGTTGAATTACGCGCAGCAGGCGCGGGAATACCTGGATTTTCGTGCGCACGGGTTAAACGTCGCTTGTGAACAATTGCGGCAAAATATCCACCAGATCGAAGAAAGTTTGCAGCTATTGCAACTCAATCAGGCGCAGGTGAGCGGCGAGATTAAACATGAAATCGAGCTGGCCCTGACCTCCGCCAACCACTTTCTGCGTCAACAGCAAGACGCGCTGAAGGt < 1:329727/250‑1 (MQ=255) gCGATCTGCCGCGCATAAACTGTTGAATTACGCGCAGCAGGCGCGGGAATACCTGGATTTTCGTGCGCACGGGTTAAACGTCGCTTGTGAACAATTGCGGCAAAATATCCACCAGATCGAAGAAAGTTTGCAGCTATTGCAACTCAATCAGGCGCAGGTGAGCGGCGAGATTAAACATGAAATCGAGCTGGCCCTGACCTCCGCCAACCACTTTCTGCGTCAACAGCAAGACGCGCTGAAGGTGCAGt < 2:272206/248‑1 (MQ=255) gCCGCGCATAAACTGTTGAATTACGCGCAGCAGGCGCGGGAATACCTGGATTTTCGTGCGCACGGGTTAAACGTCGCTTGTGAACAATTGCGGCAAAATATCCACCAGATCGAAGAAAGTTTGCAGCTATTGCAACTCAATCAGGCGCAGGTGAGCGGCGAGATTAAACATGAAATCGAGCTGGCCCTGACCTCCGCCAACCACTTTCTGCGTCAACAGCAAGACGCGCTGAAGGTGCAGTTAgcc < 1:103262/246‑1 (MQ=255) cATAAACTGTTGAATTACGCGCAGCAGGCGCGGGAATACCTGGATTTTCGTGCGCACGGGTTAAACGTCGCTTGTGAACAATTGCGGCAAAATATCCACCAGATCGAAGAAAGTTTGCAGCTATTGCAACTCAATCAGGCGCAGGTGAGCGGCGAGATTAAACATGAAATCGAGCTGGCCCTGACCTCCGCCAACCACTTTCTGCGTCAACAGCAAGATGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTc > 1:239422/1‑250 (MQ=255) cATAAACTGTTGAATTACGCGCAGCAGGCGCGGGAATACCTGGATTTTCGTGCGCACGGGTTAAACGTCGCTTGTGAACAATTGCGGCAAAATATCCACCAGATCGAAGAAAGTTTGCAGCTATTGCAACTCAATCAGGCGCAGGTGAGCGGCGAGATTAAACATGAAATCGAGCTGGCCCTGACCTCCGCCAACCACTTTCTGCGTCAACAGCAAGACGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTc > 2:478688/1‑250 (MQ=255) cATAAACTGTTGAATTACGCGCAGCAGGCGCGGGAATACCTGGATTTTCGTGCGCACGGGTTAAACGTCGCTTGTGAAAAATTGCGGCAAAATATCCACCAGATCGAAGAAAGTTTGCAGCTATTGCAACTCAATCAGGCGCAGGTGAGCGGCGAGATTAAAAATGAAATAGAGCTGGCCCTGACCTCCACCAACCACTTTCTGCGTCAACAGCTAGACGCGCTGAAGGGACAGTAACACGCCTTGTTTc > 2:367009/1‑250 (MQ=255) tcaaCTGTTGAATTACGCGCAGCAGGCGCGGGAATACCTGGATTTTCGTGCGCACGGGTTAAACGTCGCTTGTGAACAATTGCGGCAAAATATCCACCAGATCGAAGAAAGTTTGCAGCTATTGCAACTCAATCAGGCGCAGGTGAGCGGCGAGATTAAACATGAAATCGAGCTGGCCCTGACCTCCGCCAACCACTTTCAGCGTCAACAGCAAGACGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAgg > 2:15801/3‑251 (MQ=255) tGTTGAATTACGCGCAGCAGGCGCGGGAATACCTGGATTTTCGTGCGCACGGGTTAAACGTCGCTTGTGAACAATTGCGGCAAAATATCCACCAGATCGAAGAAAGTTTGCAGCTATTGCAACTCAATCAGGCGCAGGTGAGCGGCGAGATTAAACATGAAATCGAGCTGGCCCTGACCTCCGCCAACCACTTTCTGCGTCAACAGCAAGACGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGgatgat > 2:110029/1‑251 (MQ=255) gTTGAATTACGCGCAGCAGGCGCGGGAATACCTGGATTTTCGTGCGCACGGGTTAAACGTCGCTTGTGAACAATTGCGGCAAAATATCCACCAGATCGAAGAAAGTTTGCAGCTATTGCAACTCAATCAGGCGCAGGTGAGCGGCGAGATTAAACATGAAATCGAGCTGGCCCTGACCTCCGCCAACCACTTTCTGCGTCAACAGCAAGACGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGGATGAtt < 1:238057/251‑1 (MQ=255) ttGAATTACGCGCAGCAGGTGCGGGAATACCTGGATTTTCTTGCGCACGGGTTAAACGTCGCTTGTGAACAATTGCGGCAAAATATCCACCAGATCGAAGAAAGTTTGCAGCTATTGCAACTCAATCAGGCGCAGGTGAGCGGCGAGATTAAACATGAAATCGAGCTGGCCCTGACCTCCGCCAACCACTTTCTGCGTCAACAGCAAGACGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGGATGAtt < 2:309755/250‑1 (MQ=255) gcgcAGCAGGCGCGGGAATTCCTTGAGTTTCTTGCGCACGGGTTAAACGTCGCTTGTGAACAATTGCGGCAAAATATCCCCCAGATCGAAGAAAGTTTGCAGCTATTGCAACTCAAGCAGGCGCAGGTGAGCGGCGAGATTAAACATGAAATCGAGCTGGCCCTGACCTCCGCCAACCACTTTCTGCGTCAACAGCAAGACGCGCTGAAGGTGCAGTTAGCTGCCTTGTTTCAGGATGATGCTGAGCCGtt < 2:228270/251‑1 (MQ=255) gcagcaGGCGCGGGAATACCTGGATTTTCGTGCGCACGGGTTAAACGTCGCTTGTGAACAATTGCGGCAAAATATCCACCAGATCGAAGAAAGTTTGCAGCTATTGCAACTCAATCAGGCGCAGGTGAGCGGCGAGATTAAACATGAAATCGAGCTGGCCCTGACCTCCGCCAACCACTTTCTGCGTCAACAGCAAGACGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGGATGATTCGGAGCCGTTa > 1:368459/1‑250 (MQ=255) gcagcaGGCGCGGGAATACCTGGATTTTCGTGCGCACGGGTTAAACGTCGCTTGTGAACAATTGCGGCAAAATATCCACCAGATCGAAGAAAGTTTGCAGCTATTGCAACTCAATCAGGCGCAGGTGAGCGGCGAGATTAAACATGAAATCGAGCTGGCCCTGACCTCCGCCAACCACTTTCTGCGTCAACAGCAAGACGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGGATGATTCGGAGCCGTTa > 1:162038/1‑250 (MQ=255) cgcgGGAATACCTGGATTTTCGTGCGCACGGGTTAAACGTCGCTTGTGAACAATTGCGGCAAAATATCCACCAGATCGAAGAAAGTTTGCAGCTATTGCAACTCAATCAGGCGCAGGTGAGCGGCGAGATTAAACATGAAATCGAGCTGGCCCTGATCTCCGCCAACCACTTTCTGCGTCAACAGCAAGACGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGGATGATTCGGAGCCGTTAAGCGAGAtt < 1:334311/251‑1 (MQ=255) cgcgGGAATACCTGGATTTTCGTGCGCACGGGTTAAACGGCGCTTGTGAACAATTGCGGCAAAATATCCACCAGATCGAAGAAAGTTTGCAGCTATTGCAACTCAATCAGGCGCAGGTGAGCGGCGAGATTAAACATGAAATCGAGCTGGCCCTGACCTCCGCCAACCACTTTCTGCGTCAACAGCAAGACGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGGATGATTCGGAGCCGTTAAGCGAGAtt < 2:427745/251‑1 (MQ=255) ggggAATTCCTGGATGTTCGGTCGCACGGGTGAAACGTCGCTTGTGAGAAAGTGCGGCAAAATAGCCACCAGATCGAAGAAAGTATGCAGTTATAGCAACTCAATCAGGCGCAGGGGAGCGGCGAGATTAAACATGAAATCGAGCTGGCTCTGACGGCCTCCAACCACGTTCTGCGTCAACTGCAAGACGCTCTGAAGGTGCAGGTAGCAGCCTTGTTACAGGAGGAGTCGGAGCCGTTGTTCGAGATTCg < 2:198653/250‑1 (MQ=255) aaTACCTGGATTTTCGTGCGCACGGTTTAAACGTCGCTTGTGAACAAGTGCGGCAAAATATCCACCAGATCGAAGAAAGTTTGCAGCTATTGCAACTCAATCAGGCGCAGGTGAGCGGCGAGATTAAACATGAAATCGAGCTGGCCCTGACCTCCGCCAACCACTTTCTGCGTCAACAGCAAGACGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGGATGATTCGGAGCCGTTAAGCGAGATTCGTAcc < 2:102489/251‑1 (MQ=255) aaCGTCGCTTGTGAACAATTGCGGCAAAATATCCACCAGATCGAAGAAAGTTTGCAGCTATTGCAACTCAATCAGGCGCAGGTGAGCGGCGAGATTAAACATGAAATCGAGCTGGCCCTGACCTCCGCCAACCACTTTCTGCGTCAACAGCAAGACGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGGATGATTCGGAGCCGTTAAGCGAGATTCGTACACGCTGTGAGACACTGTTACAGACGgcgc > 1:445496/1‑250 (MQ=255) ggcGCTTGTGAACAATTGCGGCAAAATATCCACCAGATCGAAGAAAGTTGGCAGCTAGTGCAACTCAATCAGGCGCAGGTGAGCGGCGAGATTAAACATGAAATCGAGCTGGCCCTGACCTCCGCCAACCACTTTCTGCGTCAACAGCAAGACGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGGATGATTCGGAGCCGTTAAGCGAGATTCGTACCCGCTGTGAGACACTGTTACAGACGGCGCAGaa < 2:459156/249‑1 (MQ=255) cTTGTGAACAATTGCGGCAAAATATCCACCAGATCGAAGAAAGTTTGCAGCTATTGCAACTCAATCAGGCGCAGGTGAGCGGCGAGATTAAACATGAAATCGAGCTGGCCCTGCCCTCCGCCAACCACTTTCTGCGTCAACAGCAAGACGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGGATGATTCGGAGCCGTTAAGCGAGATTCGTACCCGCTGTGAGACACTGTTACAGACGGCCCAGCACAcc > 2:228917/1‑251 (MQ=255) ttGTGAACAATTGCGGCAAAATATCCACCAGATCGAAGAAAGTTTGCAGCTATTGCAACTCAATCAGGCGCAGGTGAGCGGCGAGATTAAACATGAAATCGAGCTGGCCCTGACCTCCGCCAACCACTTTCTGCGTCAACAGCAAGATGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGGATGATTCGGAGCCGTTAAGCGAGATTCGTACCCGCTGTGAGACACTGTTACAGACGGCGCAGAACAcc > 1:233598/1‑250 (MQ=255) aaCAATTGCGGCAAAATATCCACCAGATCGAAGAAAGTTTGCAGCTATTGCAACTCAATCAGGCGCAGGTGAGCGGCGAGATTAAACATGAAATCGAGCTGGCCCTGACCTCCGCCAACCACTTTCTGCGTCAACAGCAAGACGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGGATGATTCGGAGCCGTTAAGCGAGATTCGTACCCGCTGTGAGACACTGTTACAGACGGCGCAGAACACCATCAGt < 1:196325/251‑1 (MQ=255) aTTGCGGCAAACGATACACCAGACCGAAGAAAGTTTGCAGCTATTGCACCTCAATCAGGCGCAGGTGAGCGGCGAGCTTAAACATGAAATAGAGCTGGCCCTGCCCTCCGCCAACCAATTTCTGCGTCACCAGCAAGACGCGCTGAAGGTGCACTTCGCCGCCTTGTTTCAGGATGATTCGGAGCCGTTAAGCGAGATTCGTACCCGCTGTGCGCCGCTGTTCCAGACGGCGCCGGACACCCTCACTc‑gcg > 2:27667/1‑251 (MQ=255) gCAAAATATCCACCAGATCGAAGAAAGTTTGCAGCTATTGCAACTCAATCAGGCGCAGGTGAGCGGCGAGATTAAACATGAAATCGAGCTGGCCCTGACCGCCGCCAACCACTTTCTGCGTCAACAGCAAGACGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGGATGATTCGGAGCCGTTAAGCGAGATTCGTACCCGCTGTGAGACACTGTTACAGACGGCGCAGAACACCATCAGTC‑GCGACTTTa < 1:309737/251‑1 (MQ=255) atCCACCAGATCGAAGAAAGTTTGCAGCTATTGCAACTCAATCAGGCGCAGGTGAGCGGCGAGATTAAACATGAAATCGAGCTGGCCCTGACCTCCGCCAACCACTTTCTGCGTCAACAGCAAGACGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGGATGATTCGGAGCCGTTAAGCGAGATTCGTACCCGCTGTGAGACACTGTTACAGACGGCGCAGAACACACTCAGTC‑GAGACTTTACGCAGCg > 2:253266/1‑251 (MQ=255) ccaccaGATCGAAGAAAGTTTGCAGCTAATGCAACTCAATAAGCCCCAGGTGAGCGGCGAGATTAAACATGAAATCGAGCTGGCCCTGACCTCCGCCAACCACTTTCTGCGTCAACAGCAAGACGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGGATGATTCGGAGCCGTTAAGCGAGATTCGTACCCGCTGTGAGACACTGTTACAGCCGGCGCAGAACACCATCAGTC‑GCGACTTTACGCTGCGtt > 1:170069/1‑251 (MQ=255) cgaggacaGTTTGCAGCTATTGCAACTCAATCAGGCGCAGGTGAGCGGAGAGATTAAACATGAACTCGAGCTGGCCCTGACCTCCGCCAACCACTTTCTGCGTCAACAGCAAGACGCGCTGAAGGTGCAGTTAGCCGCATTGCTTCAGAATGATTCTGAGCAGTTAAGCGAGATTCGTACCCACTGAGAGACCCTGTGACAGCCGTCGCAAAACACCCTCAGCC‑GCGCCTTTACGCTGCGTTTTGCCgcgc > 2:138192/8‑248 (MQ=255) cGAAGAAAGTTTGCAGCTATTGCAACTCAATCAGGCGCAGGTGAGCGGCGAGATTAAACATGAAATCGAGCTGGCCCTGACCTCCGCCAACCACTTTCTGCGTCAACAGCAAGACGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGGATGATTCGGAGCCGTTAAGCGAGATTCGTACCCGCTGTGAGACACTGTTACAGACGGCGCAGAACACCATCAGTC‑GCGACTTTACGCTGCGTTTTGCCGAGc < 1:110029/251‑1 (MQ=255) agaaAGTTTGCAGATATTGCAACTCCATCCGGCGCAGGTGAGCGGCGAGATTAAACATGAAATCGAGCTGGCCCTGACCTCCGCCAACCACTTTCTGCGTCAACAGCAAGACGCGCTGACGGTGCAGTTAGCCGCCTTGTTTCAGGAGGATTCGGCGCCGTTAAGCGAGATTCGTACCAGCTGTGAGCCACTGTTACAGACGGCACAGATCACCATCGGTCTGC‑ACTTATCGCTGCGTTTTgacaaacttg > 2:195033/1‑242 (MQ=255) aGTTTGCAGTTATTGCAACTCAATCAGGCGCAGGTGAGCGGTGAGATTAAACATGAAATCGAGTTGGCCCTGACCTCCGCCAACCACTTTCTGCGTTAACAGCAAGACGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGGATGAtt < 1:243999/148‑1 (MQ=255) aGTTTGCAGCTATTGCAGCTCAATCAGGCGCATGTGAGCGGCGAGATTAAACATGAAATCGAGCTGGCCCTGACCTCCGCCAACCACTTTCTGCGTCAACAGCAAGACGCGCTGCAGGTGCAGTTAGCCGCCTTGTTTCAGGATGAtt > 2:243999/1‑148 (MQ=255) cAGCTATTGCAACTCAATCAGGCGCAGGTGAGCGGCGAGATTAAACATGAAATCGAGCTGGCCCTGACCTCCGCCAACCACTTTCTGCGTCAACAGCAAGACGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGGATGATTCGGAGCCGTTAAGCGAGATTCGTACCCGCTGTGAGACACTGTTACAGACGGCGCAGAACACCATCAGTC‑GCGACTTTACGCTGCGTTTTGCCGAGCTTGAATCCACCCt > 1:474619/1‑251 (MQ=255) gCTATTGCAACTCAATCAGGCGCAGGTGAGCGGCGAGATTAAACATGAAATCGAGCTGGCCCTGACCTCCGCCAACCACTTTCTGCGTCAACAGCAAGACGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGGATGATTCGGAGCCGTTAAGCGAGATTCGTACCCGCTGTGAGACACTg < 1:183058/181‑1 (MQ=255) gCTATTGCAACTCAATCAGGCGCAGGTGAGCGGCGAGATTAAACATGAAATCGAGCTGGCCCTGACCTCCGCCAACCACTTTCTGCGTCAACAGCAAGACGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGGATGATTCGGAGCCGTTAAGCGAGATTCGTACCCGCTGTGAGACACTg > 2:183058/1‑181 (MQ=255) gCTATTGCAACTCAATCAGGCGCAGGGGAGCGGCGAGATTAAACAGGAAATCGAGCTGGCCCTGACCTCCGCCAACCACTTTCTGCGTCAACAGCAAGACGCGCTGAAGGGGCAGTTAGCCGCCTTGTTTCAGGATGATTCGGAGCCGTTAAGCGAGATTCGTACCCGCTGTGAGACACTGTTACAGACGGCGCAGAACACCATCAGTC‑GCGACGTTACGCTGCGTTTTGCCGAGCTTGAATCCACCCttt < 2:368459/251‑1 (MQ=255) cAATCAGGCGCAGGTGAGCGGCGAGATTAAACATGAAATCGAGCTGGCCCTGACCTCCGCCAACCACTTTCTGCGTCAACAGCAAGACGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGGATGATTCGGAGCCGTTAAGCGAGATTCGTACCCGCTGTGAGACACTGTTACAGACGGCGCAGAACACCATCAGTC‑GCGACTTTACGCTGCGTTTTGCCGAGCTTGAATCCACCCTTTGCCGGGTGtt < 1:369709/249‑1 (MQ=255) aTCAGGCGCAGGTGAGCGGCGAGATTAAACATGAAAGCGAGCTGGCCCTGACCTCCGCCAACCACTTTCTGCGGCAACAGCAAGATGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGGATGATTCGGAGCCGTTAAGCGAGATTCGTACCCGCTGTGAGACACTGTTACAGACGGCGCAGAACACCATCAGTC‑GCGACTTTACGCTGCGTTTTGCCGAGCTTGAATCCACCGTTTGCCGGGTGTTAAcc < 2:185579/251‑1 (MQ=255) cAGGCGCAGGTGAGCGGCGAGATTAAACATGAAATCGAGCTGGCCCTGACCTCCGCCAACCACTTTCTGCGTCAACAGCAAGACGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGGATGATTCGGAGCCGTTAAGCGAGATTCGTACCCGCTGTGAGACACTGTTACAGACGGCGCAGAACACCATCAGTC‑GCGACTTTACGCTGCGTTTTGCCGAGCTTGAATCCACCCTTTGCCGGGTGTTAACCGa < 2:41152/251‑1 (MQ=255) aGGTGAGCGGCGAGATTAAACAGGAAATCGAGCTGGCCCTGACCTCCGCCAACCACTTTCTGCGTCAACAGCAAGCCGCGCTGAAGGTGCAGTTATCCGCCTTGTTTCAGGATGATTCGGAGCCGTTAAGCGAGATTCGTACCCGCTGTGAGACACTGTTACATACGGCGCAGAACACCATCAGTC‑GCGACTTTACGCTGCGTTTTGCCGAGCTTGAATCCACCCTTTGCCGGGTGTTAACCGATGTTAtt < 1:259595/251‑1 (MQ=255) gggggacggcgAGATTAAACATGAAATCGAGCTGGCCCTGGCCTCCGCCAACCACCTTCTGCGTCAACAGCAATACGCGCTGAAGGTGCAGTTAGCCGCCTTGGTTCAGGATGATGCGGAGCCGTTAAGCGAGATTCGTACCCGCTGTGAGACACTGTTACAGACGGCGCAGAACACCATCAGTC‑GCGACTTTACGCTGCGTTTTGCCGAGCTTGAATCCACCCTTTGCCGGGTGTTAACCGATGTTATTc < 2:473615/245‑1 (MQ=255) gTGAGCGGCGAGATTAAACATGAAATCGAGCTGGCCCTGACATCCGCCAACCACTTTCTGCGTCAACAGCACGACGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGGATGATTCGGAGCCGTTAAGCGAGATTCGTACCCGCTGTGAGACACTGTTACAGACGGAGCAGAACCCCATCAGTC‑GCGACTTTACGCTGCGTTTTGCCGAGCTTGAATCCACCCTTTGCCGGGTGTTAACCGATGTTATTCg > 2:208867/1‑251 (MQ=255) gcgAGATTAAACATGAAATCGAGCTGGCCCTGACCTCCGCCAACCACTTTCTGCGTCAACAGCAAGATGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGGATGATTCGGAGCCGTTAAGCGAGATTCGTACCCGCTGTGAGACACTGTTACAGACGGCGCAGAACACCATCAGTC‑GCGACTTTACGCTGCGTTTTGCCGAGCTTGAATCCACCCTTTGCCGGGTGTTAACCGATGTTATTCGCCCCAtt < 2:239422/251‑1 (MQ=255) cgAGATTAAACATGAAATCGAGCTGGCCCTGACCTCCGCCAACCACTTTCTGCGTCAACAGCAAGACGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGGATGATTCGGAGCCGTTAAGCGAGATTCGTACCCGCTGTGAGACACTGTTACAGACGGCGCAGAACACCATCAGTC‑GCGACTTTACGCTGCGTTTTGCCGAGCTTGAATCCACCCTTTGCCGGGTGTTAACCGATGTTATTCGCCCCATTg < 1:295189/251‑1 (MQ=255) cgAGATTAAACATGAAATCGAGCTGGCCCTGACCTCCGCCAACCACTTTCTGCGTCAACAGCAAGACGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGGATGATTCGGAGCCGTTAAGCGAGATTCGTACCCGCTGTGAGACACTGTTACAGACGGCGCAGAACACCATCAGTC‑GCGACTTTACGCTGCGGTTTGCCGAGCTTGAATCCACCCTATGCCGGGTGTTAACCGATGTTATTCGCCCCAtgg > 1:369582/1‑249 (MQ=255) ggaTTAAACATGAAACCGAGCGGGCCCTGACCTCCGCCAACCACTTTCTGCGTCAACAGCAAGACGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGGATGATTCGGAGCCGTTAAGCGAGATTCGTACCCGCTGTGAGACACTGTTACAGACGGCGCAGAACACCATCAGTC‑GCGACTTTACGCTGCGTTTTTCCGAGCTTGAATCCACCCTTTGCCGGGTGTTAACCGATGTTATTCGCCCCATTGAg < 2:278982/250‑1 (MQ=255) aaaactaGCTGGCCCTGATCTCCGCCATACACTTTCTGCGTCAACATCAAGACGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGTATGATTCGGAGCCGTTAAGCGAGATTCGTACCCGCTGTGAGACACTGTGACAGACGGCGCAGAACACCATCAGTA‑GCGATTTTACGCTGCGTTTTGCCGAGCTTGAATCCCCCCTTTTCCGGGTGTTAACCTATGTTATTCGCCCCATTGAGCTACAAGTCaaa < 1:131874/245‑1 (MQ=255) gAGCTGGCCCTGACCTCCGCCAACCACTTTCTGCGTCAACAGCAAGACGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGGATGATTCGGAGCCGTTAAGCGAGATTCGTACCCGCTGTGAGACACTGTTACAGACGGCGCAGAACACCATCAGTC‑GCGACTTTACGCTGCGTTTTGCCGAGCTTGAATCCACCCTTTGCCGGGTGTTAACCGATGTTATTCGCCCCATTGAGCAACAAGTCAAAATGGa < 1:428730/251‑1 (MQ=255) aGCTGGCCCTGACCTCCGCCAACCACTTTCTGCGTCAACAGCAAGACGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGGATGATTCGGAGCCGTTAAGCGAGATTCGTACCCGCTGTGAGACACTGTTACAGACGGCGCAGAACACCATCAGTC‑GCGGCTTTACGCTGCGTTTTGCCGAGCTTGAATCCACCCTTTGCCGGGTGTTAACCGATGTTCTTCGCCCCTTTGAGCACCGAGTCAAAATGGa > 2:205757/1‑250 (MQ=255) ccTGACCTCCGCCAACCACTTTCTGCGTCAACAGCAAGACGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGGATGATTCGGAGCCGTTAAGCGCGATTCGTACCCGCTGTGAGACACTGTTACAGACGGCGCAGAACACCATCAGTC‑GCGACTTTACGCTGCGTTTTGCCGAGCTTGAATCCACCCTTTGCCGGGTGTTAACCGATGTTATTCGCCCCATTGAGCAACAAGACACAATGGAATTggg > 2:86640/1‑247 (MQ=255) ccTGACCTCCGCCAACCACTTTCTGCGTCAACAGCAAGACGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGGATGATTCGGAGCCGTTAAGCGAGATTCGTACCCGCTGTGAGACACTGTTACAGACGTCGCAGAACACCATCAGTC‑GCGACTTTACGCTGCGTTTTGCCGAGCTTGAATCCACCCTTTGCCGGGTGTTAACCGATGTTATTCGCCCCATTGAGCAACAAGTCAAAATGGAATTGAGCg > 2:137061/1‑251 (MQ=255) ccgccGCCATCCACTTTCTGCGTCAACAGCAAGACGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGGATGATTCGGAGCCGTTAAGCGAGATTCGTACCCGCTGTTAGACACTGTTACAGACGGCGCAGAACACCATCAGTC‑GCGACTTTACGCTGCGTTTTGCCGAGCGTGAATCCTCCCTTTGCCGGGTGTTAACCGATGTTATTCGCCCCATTGAGCAACAAGTCAAAATGGAATTGAGCGAGTCa < 1:448940/248‑1 (MQ=255) gCCAACCACTTTCTGCGTCAACAGCAAGATGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGGATGATTCGGAGCCGTTAAGCGAGATTCGTACCCGCTGTGAGACACTGTTACAGACGGCGCAGAACACCATCAGTC‑GCGACTTTACGCTGCGTTTTGCCGAGCTTGAATCCACCCTTTGCCGGGTGTTAACCGATGTTATTCGCCCCATTGAGCAACAAGTCAAAATGGAATTGAGCGAGTCAGGGtt > 2:168212/1‑251 (MQ=255) ccAACCACTTTCTGCGTCAACAGCAAGACGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGGATGATTCGGAGCCGTTAAGCGAGATTCGTACCCGCTGTGAGACACTGTTACAGACGGCGCAGAACACCATCAGTC‑GCGACTTTACGCTGCGTTTTGCCGAGCTTGAATCCACCCTTTGCCGGGTGTTAACCGATGTTATTCGCCCCATTGAGca > 1:13507/1‑217 (MQ=255) ccAACCACTTTCTGCGTCAACAGCAAGACGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGGATGATTCGGAGCCGTTAAGCGAGATTCGTACCCGCTGTGAGACACTGTTACAGACGGCGCAGAACACCATCAGTC‑GCGACTTTACGCTGCGTTTTGCCGAGCTTGAATCCACCCTTTGCCGGGTGTTAACCGATGTTATTCGCCCCATTGAGCAACAAGTCAAAATGGAATTGAGCGAGTCAGGGttt < 1:28857/251‑1 (MQ=255) ccAACCACTTTCTGCGTCAACAGCAAGACGCGCTGAAGGGGCAGTTAGCCGCCTTGTTTCAGGATGATTCGGAGCCGTTAAGCGAGATTCGTACCCGCTGTGAGACACTGTTACAGACGGCGCAGAACACCATCAGTC‑GCGACTTTACGCTGCGTTTTGCCGAGCTTGAATCCACCCTTTGCCGGGTGTTAACCGATGTTATTCGCCCCATTGAGca < 2:13507/217‑1 (MQ=255) accccTTTCTGGGTCAACAGCAAGACGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGGATGTGTCGGAGCCGTTAAGCGAGATTCGTACCCGCTGTGAGACACTGTTACAGACGGCGCAGAACACCATCAGTC‑GCGACGTTACGCTGCGTTTTGCCGAGCTTGAATCCACCCTTTGCCGGGTGTTAACCGATGTTATTCGCCCCATTGAGCAACAAGTCAAAATGGAATTGAGCGAGTCAGGGTTTCGt < 2:445496/247‑1 (MQ=255) tCTGCGTCAACAGCAAGACGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGGATGATTCGGAGCCGTTAAGCGAGATTCGTACCCGCTGTGAGACACTGTTACAGACGGCGCAGAACACCATCAGTC‑GCGACTTTACGCTGCGTTTTGCCGAGCTTGAATCCACCCTTTGCCGGGTGTTAACCGATGTTATTCGCCCCATTGAGCAACAAGTCAAAATGGAATTGAGCGAGTCAGGGTTTCGTCCTggg < 1:478688/250‑1 (MQ=255) cGTCAACAGCAAGACGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGGCTGCTTCGGAGCCGTTAAGCGAGATTCGTACCCGCTGCGAGCCACTGTTACAGACGGCGCAGAACACCATCAGTC‑GCGACTTTACGCTGCGTTTTGCCGAGCTTGAATCCACCCTTTGCCGGGTGTTAACCGATGTTATTCGCCCCATTGAGCACCAAGTCAAAATGGAATTGAGCGAGTCAGGGTTTCGTCCTGGGTTTc > 1:465286/1‑250 (MQ=255) cAACAGCAAGACGCGTTGGTGGTGCAGTTAGCCGCCTTGTTTCAGGATGATTCGGAGCCGTTAAGCGAGATTCGTACCCGCTGTGAGACACTGTTACAGACGGCGCAGAACACCATCAGTC‑GCGACTTTACGCTGCGTTTTGCCGAGCTTGAATCCACCCTTTGCCGGGTGTTAACCGATGTTATTCGCCCCATTGAGCAACAAGTCAAAATGGAATTGAGCGAGTCAGGGTTTCGTCCTGGGTTTCAtt < 1:483100/250‑1 (MQ=255) aaCAGCAAGACGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGGATGATTCGGAGCCGTTAAGCGAGATTCGTACCCGCTGTGAGACACTGTTACAGACGGCGCAGAACACCATCAGTC‑GCGACTTTACGCTGCGTTTTGCCGAGCTTGAATCCACCCTTTGCCGGGTGTTAACCGATGTTATTCGCCCCATTGAGCAACAAGTCAAAATGGAATTGAGCGAGTCAGGGTTTCGTCCTGGGTTTCAtttt < 1:450141/251‑1 (MQ=255) aaCAGCAAGACGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGGATGATTCGGAGCCGTTAAGCGAGATTCGTACCCGCTGTGAGACACTGTTACAGACGGCGCAGAACACCATCAGTC‑GCGACTTTACGCTGCGTTTTGCCGAGCTTGAATCCACCCTTTGCCGGGGGTTAACCGATGTTATTCGCCCCATTGAGCAACAAGTCCAAATGGCATTGAGCGAGTCAGGGTTTCGTCCTGGGTTTCGtttt > 2:137112/1‑251 (MQ=255) cAAGACGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGGATGATTCGGAGCCGTTAAGCGAGATTCGTACCCGCTGTGAGACACTGTTACAGACGGCGCAGAACACCATCAGTC‑GCGACTTTACGCTGCGTTTTGCCGCGCTTGAATCCACCCTTTGCCGGGTGTTAACCGATGTTATTCGCCCCCTTGAGCAACAAGTCAAAATGGAATTGCGCGAGTCAGGGTTTCGTCCTGGGTTTCATTTTCCTGt > 2:310758/1‑251 (MQ=255) aaGATGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGGATGATTCGGAGCCGTTAAGCGAGATTCGTACCCGCTGTGAGACACTGTTACAGACGGCGCAGAACACCATCAGTC‑GCGACTTTACGCTGCGTTTTGCCGAGCTTGAATCCACCCTTTGCCGGGTGTTAACCGATGTTATTCGCCCCATTGAGCAACAAGTCAAAATGGAATTGAGCGAGTCAGGGTTTCGTCCTGGGTTTCATTTTCCTGtt < 2:233598/251‑1 (MQ=255) aaGACGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGGATGATTCGGAGCCGTTAAGCGAGATTCGTACCCGCTGTGAGACACTGTTACAGACGGCGCAGAACACCATCAGTC‑GCGACTTTACGCTGCGTTTTGCCGAGCTTGAATCCACCCTTTGCCGGGTGTTAACCGATGTTATTCGCCCCATTGAGCAACAAGTCAAAATGGAATTGAGCGAGTCAGGGTTTCGTCCTgg > 2:291045/1‑235 (MQ=255) aaGACGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGGATGATTCGGAGCCGTTAAGCGAGATTCGTACCCGCTGTGAGACACTGTTACAGACGGCGCAGAACACCATCAGTC‑GCGACTTTACGCTGCGTTTTGCCGAGCTTGAATCCACCCTTTGCCGGGTGTTAACCGATGTTATTCGCCCCATTGAGCAACAAGTCAAAATGGAATTGAGCGAGTCAGGGTTTCGTCCTgg < 1:291045/235‑1 (MQ=255) aaGACGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGGATGATTCGGAGCCGTTAAGCGAGATTCGTACCCGCTGTGAGACACTGTTACAGACGGCGCAGAACACCATCAGTC‑GCGACTTTACGCTGCGTTTTGCCGAGCTTGAATCCACCCTTTGCCGGGTGTTAACCGATGTTATTCGCCCCATTGAGCAACAAGTCAAAATGGAATTGAGCGAGTCAGGGTTTCGTCCTGGGTTTCATTTTCCTGtt < 1:232435/251‑1 (MQ=255) | CTCGTTGTATGCTCTGCGATCTGCCGCGCATAAACTGTTGAATTACGCGCAGCAGGCGCGGGAATACCTGGATTTTCGTGCGCACGGGTTAAACGTCGCTTGTGAACAATTGCGGCAAAATATCCACCAGATCGAAGAAAGTTTGCAGCTATTGCAACTCAATCAGGCGCAGGTGAGCGGCGAGATTAAACATGAAATCGAGCTGGCCCTGACCTCCGCCAACCACTTTCTGCGTCAACAGCAAGATGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGGATGATTCGGAGCCGTTAAGCGAGATTCGTACCCGCTGTGAGACACTGTTACAGACGGCGCAGAACACCATCAGTC‑GCGACTTTACGCTGCGTTTTGCCGAGCTTGAATCCACCCTTTGCCGGGTGTTAACCGATGTTATTCGCCCCATTGAGCAACAAGTCAAAATGGAATTGAGCGAGTCAGGGTTTCGTCCTGGGTTTCATTTTCCTGTT > NC_000913/4328376‑4328868 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |