| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,834,564 | G→A | Q456* (CAA→TAA) | yicJ ← | putative xyloside transporter YicJ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,834,564 | 0 | G | A | 96.5% | 173.9 / ‑1.9 | 58 | Q456* (CAA→TAA) | yicJ | putative xyloside transporter YicJ |
| Reads supporting (aligned to +/- strand): ref base G (2/0); new base A (30/25); total (33/25) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.99e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.93e-01 | |||||||||||
GAAAATGCTCAATCCGCACACCGACAATACCTTCCTGTGGGGAGAAAAAGCGCAACGTAAATAAAGGCGTATCAAGCTGCCAGGTACGTTCACGCACATCACGGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTTGAGAGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCC > NC_000913/3834321‑3834808 | gAAAATGCTCAATCCGCACACCGACAATACCTTCCTGTGGGGAGAAAAAGCGCAACGTAAATAAAGGCGTATCAAGCTGCCAGGTACGTTCACGCACATCACGGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTTAAGAgg < 1:160572/249‑1 (MQ=255) ataccGCACACCGACAATACCTTACTGTTGTGAGAAAAAGCGCAACGTAAATTAAGGCGTATCAAGCTGCCAGGTACGTTCACGCACAACACGGGGGGCAGCATAGACAACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTGCCATCGCTAAATTCCATTGCGTTTCCTTAGTTGTGCTCTTCTTAAGACGTGAAtggttgtt < 2:424650/248‑3 (MQ=255) aaTCCGCACACCGACAATACCTTCCTGTGGGGAGAAAAAGCGCAACGTAAATAAAGGCGTATCAAGCTGCCAGGTACGTTCACGCACATCACGGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACGTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTTAAGAGGTGAATTGTTGCt < 2:374665/251‑1 (MQ=255) aaTCCGCACACCGACAATACCTTCCTGTGGGGAGAAAAAGCGCAACGTAAATAAAGGCGTATCAAGCTGCCAGGTACGTTCACGCACATCACGGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTTAAGATGTGAATTGTTGCt > 1:145879/1‑251 (MQ=255) cGACAATACCTTCCTGTGGGGAGAAAAAGCGCAACGTAAATAAAGGCGTATCAAGCTGCCAGGTACGTTCACGCACATCACGGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCAAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTTAAGAGGTGAATTGTTGCTGGCAACGGCGt > 1:441811/1‑251 (MQ=255) cTGTGGGGAGAAAAAGCGCAACGTAAATAAAGGCGTATCAAGCTGCCAGGTACGTTCACGCACATCACGGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTTAAGAGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGcc > 2:201737/1‑250 (MQ=255) ggggAGAAAAAGCGCAACGTAAATAAAGGCGTATAAAGCTGCCAGGTACGTTCCCGCACATCACGGGGGGCAGCATAGACCACCATTTCATTATCCTCATGTTCAACCTCGAACACCTGACGCGGGCGAATCAACTTGAGACCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTAATTGCCGTTCCTTAGTTCTGCACTTCTTAAGAGTAGACTTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTg > 1:467451/1‑251 (MQ=255) ggggAGAAAAAGCGCAACGTAAATAAAGGCGGATCAAGCTGCCAGGTACGTTCACGCACATCACGGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTTAAGAGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTg < 2:21380/251‑1 (MQ=255) gaAACAGCGCAACGTAAATAAAGGCGTATCAAGCTGCCAGGTACGTTCACGCACATCACGGGGGGAAGCATAGACCACCATTTCATAATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCAATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCCCTTCTTCAGAGGTGACTTGGTGCTGGCAACTGCGTTTACCGTGAGCCAGCAGttac > 2:391594/1‑248 (MQ=255) aaataaaGGCTTAACAATCTGCCAGGTACGTTCACGCCCATCACGGGGGTCAGCATAGACCACCATTTCATGTTCCCGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCATGTTGAATCAACCAGTTTCCAGCGCTAATTTTCATTGACGTTCCTTAGTTCTGCCGTTCTTAAGAGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTTTTCCATAACGGTTGTCAGAt < 2:288978/251‑1 (MQ=255) aaataaaGGCGTATCAAGCTGCCAGGTACGTTCACGCACATCACGGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTTAAGAGGTGAATTGTTGCTGGCAACGGCGTTTCCCCTGAGCCAGCTGTTCCATAACGGTTTTCAGa < 1:405786/250‑1 (MQ=255) aaaGGCGTATCAAGCTGCCAGGTACGTTCACGCACATCACGGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTTAAGAGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATtgtg < 1:357385/251‑1 (MQ=255) aaGGCGTATCAAGCTGCCAGGTACGTTCACGCACATCACGGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTTAAGAGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGc > 2:227514/1‑251 (MQ=255) aGGCGTATCAAGCTGCCAGGTACGTTCACGCACATCACGGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTTAAGAGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGcg > 1:203770/1‑251 (MQ=255) gCGTATCAAGCTGCCATGTACGTTCACGCACATCACGGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTTAAGAGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGcgtc < 1:363084/251‑1 (MQ=255) aaGCTGCCAGGTACGTTCACGCACATAACGGGGGGCAGCATAGAACACCATTTCATTATCCTGCTGTTAAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTTAAGTGGTGAATTGTTGCTGGTAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCgtgagtg > 1:179336/1‑251 (MQ=255) ggCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTTAAGAGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTTAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCa < 1:337326/251‑1 (MQ=255) ggCAGAATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGAGAATCAAATTGAGGCCAGGTTGAATCAACCAGATTCCATCGCTAATTTTCATTGCCGTTCCTTAGATCTGCACTTCTTAAGAGGTGCATTGTTGCTGGCAACGGCGTTTACACTGAGCCAGCTGTTCCATAACGGTTATCAGATTGTGCGTCGTGAGTGAGTAGTATCGTTTAGCGATAATCGCGCTCAGc > 1:318506/1‑250 (MQ=255) caTAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTTAAGAGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATa > 2:373454/1‑250 (MQ=255) gACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTTAAGAGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGa < 1:345288/251‑1 (MQ=255) ccaccaTTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATTAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTTAAGAGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATc < 1:433059/251‑1 (MQ=255) ccaccaTTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTTAAGAGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATc < 1:273798/251‑1 (MQ=255) ccaTTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTTAAGAGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGcc > 2:154747/1‑251 (MQ=255) tATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTTAAGAGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAAt < 2:167472/250‑1 (MQ=255) ccTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTTAAGAGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGt < 1:154747/250‑1 (MQ=255) tgctgTTCAACCTCGAACACCTGACGAGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTTGAGAGGTGACTTGTTGCTGGCAACGTCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGa > 1:87686/1‑250 (MQ=255) tgTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTTAAGAGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAAt > 1:6398/1‑249 (MQ=255) gAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTTAAGAGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGGGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAACGCAATAatg > 2:91419/1‑250 (MQ=255) acacCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTTAAGAGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAatgatg > 1:413229/1‑251 (MQ=255) gAAGCGGGTGAATCAAATTGCGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTTAAGAGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGTTAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGTTGCTAATc > 2:376946/1‑251 (MQ=255) aGCGGGTGAATCAAATTGAGGCCATGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTTCTTAGTTCTGCACTTCTTAAGAGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGt < 1:454438/251‑1 (MQ=255) aGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTTGAGAGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGt > 1:231673/1‑251 (MQ=255) gctggttaaTCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTTAAGAGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTGCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGGAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTTAATAGCGCACTAAGGATGCTAATCGTg < 2:274677/244‑1 (MQ=255) tGAATCAAATTGAGGCAAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTTAAGAGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCt > 2:481124/1‑251 (MQ=255) aaTCAAATTGAGGCCAGGTTGAATCAACCATTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTTAAGAGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGTTTTTCAGATTGTGCGTCTTGAGTGAGTAGTATCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGt < 1:397367/251‑1 (MQ=255) cAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTTAAGAGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCt > 2:253687/1‑251 (MQ=255) aaaTTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTTAAGAGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGAAGCTAATCGTGGCGCTGTTCTg > 2:376755/1‑251 (MQ=255) aGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTTAAGAGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTg > 1:449087/1‑251 (MQ=255) gTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTTAAGAGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGcc < 1:99542/251‑1 (MQ=255) tGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTTAAGAGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATtgt < 1:401834/127‑1 (MQ=255) tGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTTAAGAGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATtgt > 2:401834/1‑127 (MQ=255) tGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTTAAGAGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCACTAATGATGCTAATCGt < 2:356662/224‑1 (MQ=255) tGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTTAAGAGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGt > 1:356662/1‑224 (MQ=255) aCCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTTAAGAGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCatat > 1:387517/1‑251 (MQ=255) cctgcGCTAATTTTCATTGCCGTTCCTTATTTCTGCACTTCTTAAGAGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGCCGTGAGTGAGTAGTAGCTTTTAGCGATAATCGCGCTCAGAAAATAACAGATCGCCGGAACAATCGTAAATAGCGCAATATTGATGCAAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATa < 1:271105/247‑1 (MQ=255) ccATCGTTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTTAAGGGGTGATTTGTTGCTGGCAACGGCGTTTGCCCTGAGCCTGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGAGATAATCGCGCTCAGCATATAACAGATCGCCGGAACAATCGTGAAGTGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGATTTTTCTGCCGcatcattgccgcc < 2:467451/248‑8 (MQ=255) cATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTTAAGAGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATa > 2:293909/1‑250 (MQ=255) cGCTAATTTTCATTGCCGTTCCTTAGTTCTGCCCTTCTTAAGAGGTGAATTGTTGCTGTCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGTTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGAAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTTTTCTGCTCTTTTTCTGCCGCATCATATCCGCCATAAGc < 1:110982/250‑1 (MQ=255) aTTTTCATTGCCGTTCCTTAGTTCTGCACTTCTTAAGAGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCa > 1:108816/1‑250 (MQ=255) aTTTTCATTGCCGTTCCTTAGTTCTGCACTTCTTAAGAGGGGAATTGTTGCTGGCAACGGCGTTTACCCGGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGATTGAGTAGGAGCTTTTAGCGATAATCCCGCTAAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAAAAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCa < 2:108816/250‑1 (MQ=255) tttCATTGCCGTTCCTTAGTTCTGCACTTCTTAAGAGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGcctcat > 2:198665/1‑230 (MQ=255) tttCATTGCCGTTCCTTAGTTCTGCACTTCTTAAGAGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGcatcat < 1:198665/230‑1 (MQ=255) acTTAGTTCTGCACTTCTTAAGAGGTGAATTGTTGCTGGCCACGGCGTTTACCCTGAGCCAGCTGTTCCCTAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTAAGCAAATAACAGATCGCCGGAACAATCGTGACTAGCGCAATAATGATGCTAATCGTGGCCCTGTTCTGCGCTTTTTCTGCCGCATCCTATCCGCACTAAGCCAGCATCCCGCCGATAATAgc > 2:335529/2‑251 (MQ=255) cTTAGTTCTGCACTTCTTAAGAGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAgcg > 1:463355/1‑251 (MQ=255) gTTCTGCACTTCTTAAGAGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCCATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCCGCATCCAGCCGATAAGAGcgccgc > 2:445954/1‑251 (MQ=255) gCACTTCTTAAGAGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGa > 2:49178/1‑249 (MQ=255) gCACTTCTTAAGAGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGACATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGa > 1:221539/1‑249 (MQ=255) cttcttAAGAGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGcc > 1:146427/1‑251 (MQ=255) | GAAAATGCTCAATCCGCACACCGACAATACCTTCCTGTGGGGAGAAAAAGCGCAACGTAAATAAAGGCGTATCAAGCTGCCAGGTACGTTCACGCACATCACGGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTTCTTGAGAGGTGAATTGTTGCTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCC > NC_000913/3834321‑3834808 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |