Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,647,949	C→T	intergenic (‑161/‑114)	dinQ ← / → agrA	membrane toxin DinQ/small RNA AgrA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,647,949	0	C	T	100.0%	130.7 / NA	44	intergenic (‑161/‑114)	dinQ/agrA	membrane toxin DinQ/small RNA AgrA
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (18/26);  total (18/26)

ATCAGTTCAGAAGCTGAAGCAGAAAGCGGATCAGTTCCAGCAGCGCAATTAACGCCCCTAGAACGATGATTGCTTTATCAATCACCCGTTTTCTCCATGCGATGGAGTGAGAATGCATCCGCTTACTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATGCGCATTGCCAGAGTGAAAATGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTT‑ACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTA  >  NC_000913/3647704‑3648193                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                      aTCAGTTCAGAAGCTGAAGCAGAAAGCGGATCAGTTCCAGCAGCGCAATTAACGCCCCTAGAACGATGATTGCTTTATCAATCACCCGTTTTCTCCATGCGATGGAGTGAGAATGCATCCGCTTACTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATGTGCAt                                                                                                                                                                                                                                                   <  2:21275/250‑1 (MQ=255)        cAGAAGCTGAAGCAGAAAGCGGATCAGTTCCAGCAGCGCAATTAACGCCCCTAGAACGATGATTGCTTTATCAATCACCCGTTTTCTCCATGCGATGGAGTGAGAATGCATCCGCTTACTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGCCTTTGAAAGCGTTTATGTGCATTGCCag                                                                                                                                                                                                                                             >  2:364669/1‑249 (MQ=255)           aaGCTGAAGCAGAAAGCGGATCAGTTCCAGCAGAGCAATTAACGCCCCTAGAACGATGATTGCTTTATCAATCACCCGTTTTCTCCATGCGATGGAGTGAGAATGCATCCGCTTACTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTACCGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATGTGCATTGCCAGAGTg                                                                                                                                                                                                                                         >  2:193054/1‑250 (MQ=255)                gAAGCAGAAAGCGGATCAGTTCCAGCAGCGCAATTAACGCCCCTAGAACGATGATTGCTTTATCAATCACCCGTTTTCTCCATGCGATGGAGTGAGAATGCATCCGATTACTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAACGCGTTTATGTGCATTGCCAGAGTGAAAATg                                                                                                                                                                                                                                   >  1:452773/1‑251 (MQ=255)                    cAGAAAGCGGATCAGTTCCAGCAGCGCAATTAACGCCCCTAGAACGATGATTGCTTTATCAATCACCCGTTTTCTCCATGCGATGGAGTGAGAATGCATCCGCTTACTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATGTGCATTGCCAGAGTGAAAATGCCTc                                                                                                                                                                                                                               <  1:193054/251‑1 (MQ=255)                     aGAAAGCGGATCAGTTCCAGCAGCGCAATTAACGCCCCTAGAACGATGATTGCTTTATCAATCACCCGTTTTCTCCATGCGATGGAGTGAGAATGCATCCGCTTACTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATGTGCATTGCCAGAGTGAAAATGCCTc                                                                                                                                                                                                                               >  1:274603/1‑250 (MQ=255)                        aaGCGGATCAGTTCCAGCAGCGCAATTAACGCCCCTAGAACGATGATTTCTTTATCAATCTCCCGTTTTCTCCATGCGATGGAGTGAGAATGCATCCTCTTACTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATGTGCATTGCCAGAGTGAAAATGCCTCagag                                                                                                                                                                                                                           <  2:255791/251‑1 (MQ=255)                                cAGTTCCAGCAGCGCAATTAACGCCCCTAGAACGATGATTGCTTTATCAATCACCCGTTTTCTCCATGCGATGGAGTGAGAATGCATCCGCTTACTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATGTGCATTGCCAGAGTGAAAATGCCTCAGAGCTAACTg                                                                                                                                                                                                                    <  1:66148/250‑1 (MQ=255)                                     ccAGCAGCGCAATTAACGCCCCTAGAACGATGATTGCTTTATCAATCACCCGTTTTCTCCATGCGATGGCGTGAGAATGCATCCGCTTACTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGCTAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGCCCAGGACTTTGACAGCGTTTATGTGCATTGCCAGAGTGAAAATGCCTCAGAACTAACTGGATAAt                                                                                                                                                                                                              >  2:301643/1‑251 (MQ=255)                                     ccAGCAGCGCAATTAACGCCCCTAGAACGATGATTGCTTTATCAATCACCCGTTTTCTCCATGCGATGGAGTGAGAATGCATCCGCTTACTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATGTGCATTGCCAGAGTGAAAATGCCTCAGAGCTAACTGGATAAt                                                                                                                                                                                                              <  1:300761/251‑1 (MQ=255)                                             gcAATTAACGCCCCTAGAACGATGATTGCTTTATCAATCCCCCGTTTTCTCCATGCGATGGAGTGAGAATGCATCCGCTTACTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATGTGCATTGCCAGAGTGAAAATGCCTCAGAGCTAACTGGATAATCATACAGt                                                                                                                                                                                                      <  2:297542/251‑1 (MQ=255)                                                    aCGCCCCTAGAACGATGATTGCTTTATCAATCACCCGTTTTCTCCATGCGATGGAGTGAGAATGCATCCGCTTACTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATGTGCATTGCCAGAGTGAAAATGCCTCAGAGCTAACTGGATAATCATACAGTACATGCa                                                                                                                                                                                               <  1:212481/251‑1 (MQ=255)                                                        cccTAGAACGATGATTGCTTTATCAATCACCCGTTTTCTCCATGCGATGGAGTGAGAATGCAGCCGCTTACTCATCCACTGCCTGTCACGGCGCATGTCTCAGTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATGTGCATTGCCAGAGTGAAAATGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGtt                                                                                                                                                                                           <  2:187252/251‑1 (MQ=255)                                                              aaCGATGATTGCTTTATCAATCACCCGTTTTCTCCATGCGATGGAGTGAGAATGCATCCGCTTACTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATGTGCATTGCCAGAGTGAAAATGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATaaaa                                                                                                                                                                                     <  1:457461/251‑1 (MQ=255)                                                                      ttGCTTTATCAATCACCCGTTTTCTCCATGCGATGGAGTGAGAATGCATCCGCTTACTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAACGCGTTTATGTGCATTGCCAGAGTGAAAATGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACg                                                                                                                                                                             >  1:284761/1‑251 (MQ=255)                                                                                aatcaCCCGTTTTCTCCATGCGATGGAGTGAGAATGCATCCGCTTACTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATGTGCATTGCCAGAGTGAAAATGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAAt                                                                                                                                                                   <  1:205443/251‑1 (MQ=255)                                                                                                 aTGCGATGGAGTGAGAATGCATCCGCTTACTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATGTGCATTGCCAGAGTGAAAATGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTAtt                                                                                                                                                  <  1:415109/251‑1 (MQ=255)                                                                                                                     aTCCGCTTACTCATCCACTGCCTGTCCCGGCGCATGTCTCAGTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATGTGCATTGCCAGAGTGAAAATGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAgatga                                                                                                                              <  2:274603/251‑1 (MQ=255)                                                                                                                     aTCCGCTTACTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATGTGCATTGCCAGAGTGAAAATGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAgatga                                                                                                                              <  1:282714/251‑1 (MQ=255)                                                                                                                              cTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATGTGCATTGCCAGAGTGAAAATGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTAtct                                                                                                                     >  2:419131/1‑251 (MQ=255)                                                                                                                                cATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATGTGCATTGCCAGAGTGAAAATGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTAtctc                                                                                                                    >  1:301430/1‑250 (MQ=255)                                                                                                                                aaTCCACTGCCTGTCACGGCGTATGTCGCATTGTTAGATAAGAAATCTATCAATCCGGCCAGAGCATCAGTTAACGGCACCTCCCGTACTTATGATCAGGACTTTGAAAGCGTTTATGTGCATTGCCAGAGGTAAAATGCCTCAGAGCTAACTGGATAATAATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTGTCAGTATGGTAGTAGCATTGATGCGTTAGATGATGGCTATCTCa                                                                                                                   <  2:250033/250‑1 (MQ=255)                                                                                                                                   ccACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATGTGCATTGCCAGAGTGAAAATGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACt                                                                                                                 <  1:419131/250‑1 (MQ=255)                                                                                                                                           tGTCACGACGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATGTGCATTGCCAGAGTGAAAATGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCAAGTCCTTGCAATAGTTTCAGTATGGAATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTc                                                                                                           >  2:296216/1‑248 (MQ=255)                                                                                                                                                  gcgcATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATGTGCATTGCCAGAGTGAAAATGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGAAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGccacc                                                                                                  >  1:136965/1‑250 (MQ=255)                                                                                                                                                                gTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATGTGCATTGCCAGAGTGAAAATGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGa                                                                                    <  1:445875/250‑1 (MQ=255)                                                                                                                                                                     aTAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATGTGCATTGCCAGAGTGAAAATGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTaa                                                                              <  1:402286/251‑1 (MQ=255)                                                                                                                                                                          aaCTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATGTGCATTGCCAGAGTGAAAATGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAAc                                                                         >  1:431853/1‑251 (MQ=255)                                                                                                                                                                                        ggCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGCCCAGGACTTTGAAAGCGTTTATGTGCATTGCCAGAGTGAAAATGCCTCAGAGCTAACTGGATAATCATACAATACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGATTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACTCAAAGTCgg                                                           >  1:303169/1‑251 (MQ=255)                                                                                                                                                                                                   cAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATGTGCATTGCCAGAGTGAAAATGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACTCAAAGTCGGTTTTTTT‑ACAt                                               <  2:301430/251‑1 (MQ=255)                                                                                                                                                                                                     gTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATGTGCATTGCCAGAGTGAAAATGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTT‑ACATcc                                             <  1:92940/251‑1 (MQ=255)                                                                                                                                                                                                            gCACCACCCCGACTTCTGACCAGGACGTTGAAAGCGGTTATGTGCATTGCCAGAGGGAAAATGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTT‑ACATCCGGATTCg                                      <  2:249332/251‑1 (MQ=255)                                                                                                                                                                                                             caccacCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATGTGCATTGCCAGAGTGAAAATGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTT‑ACATCCGGATTCgg                                     >  2:73521/1‑251 (MQ=255)                                                                                                                                                                                                                               ccAGGACTTTGAAAGCGTTTATGTGCATTGCCAGAGTGAAAATGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTT‑ACATCCGGGTTCGGACAAGGCTTAATATGACg                   >  2:187268/1‑251 (MQ=255)                                                                                                                                                                                                                                cAGGACTTTGAAAGCGTTTATGTGCATTGCCAGAGTGAAAATGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCCGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAGGTCGGTTTTTTT‑ACATCCGGATTCGGCCAAGGCTTAATATGACg                   >  1:181687/1‑250 (MQ=255)                                                                                                                                                                                                                                          aaaGCGTTTATTTGCATTGCCAGAGTGAAAATGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGt         <  2:347898/251‑1 (MQ=255)                                                                                                                                                                                                                                          aaaGCGTTTATGTGCATTGCCAGAGTGAAAATGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAACGTCGGTTTTTTT‑ACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTg        >  2:369889/1‑251 (MQ=255)                                                                                                                                                                                                                                          aaaGCGTTTATGTGCATTGCCAGAGTGAAAATGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTc                                                             <  2:112866/199‑1 (MQ=255)                                                                                                                                                                                                                                          aaaGCGTTTATGTGCATTGCCAGAGTGAAAATGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTc                                                             >  1:112866/1‑199 (MQ=255)                                                                                                                                                                                                                                            agtggttATGTGCATTGCCAGAGTGAAAATGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACAAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGGTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTT‑ACATCCGTATTCGGACAAGGCTTAATATGACGATGACCCAGTGaa      <  1:12561/246‑1 (MQ=255)                                                                                                                                                                                                                                              cGTTTATGTGCATTGCCAGAGTGAAAATGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTT‑ACATCCGGAtt                                        <  2:296426/215‑1 (MQ=255)                                                                                                                                                                                                                                              cGTTTATGTGCATTGCCAGAGTGAAAATGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTT‑ACATCCGGAtt                                        >  1:296426/1‑215 (MQ=255)                                                                                                                                                                                                                                                 ttATGTGCATTGCCAGAGTGAAAATGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTT‑ACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGta  <  1:301643/250‑1 (MQ=255)                                                                                                                                                                                                                                                 ttATGTGCATTGCCAGAGTGAAAATGCCTAAGAGCTAACTGGATAATCAAACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTT‑ACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGta  <  2:393791/250‑1 (MQ=255)                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                      ATCAGTTCAGAAGCTGAAGCAGAAAGCGGATCAGTTCCAGCAGCGCAATTAACGCCCCTAGAACGATGATTGCTTTATCAATCACCCGTTTTCTCCATGCGATGGAGTGAGAATGCATCCGCTTACTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATGCGCATTGCCAGAGTGAAAATGCCTCAGAGCTAACTGGATAATCATACAGTACATGCAGGTTATAAAACCAGCACGTCCTTGCAATAGTTTCAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTT‑ACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTA  >  NC_000913/3647704‑3648193

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑