| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,560,362 | G→A | intergenic (+496/+260) | rtcR → / ← glpG | DNA‑binding transcriptional activator RtcR/rhomboid protease GlpG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,560,362 | 0 | G | A | 96.0% | 141.8 / NA | 51 | intergenic (+496/+260) | rtcR/glpG | DNA‑binding transcriptional activator RtcR/rhomboid protease GlpG |
| Reads supporting (aligned to +/- strand): ref base G (1/0); major base A (23/25); minor base C (0/2); total (24/27) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.93e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.85e-01 | |||||||||||
AACTGGGAGATAAAATCGAGCGTCGCTTCGCCAATGATCCCGCCATCGCGGCTGCGTAATTCGCCACCGGCGAGAATGATGCGAAAATCTTCTTTTACCATCAACGTGTTAGCAACGTT‑GAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTG‑CCGATATCGATAAACAGCGTCGAGCCATTGGGG‑ATTTGCTCCG‑CCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGC‑CAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAA‑ATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCA > NC_000913/3560119‑3560604 | aaCTGGGAGATAAAATCGAGCGTCGCTGCGCCAATGACCCCGCAATCGCGGCTGCGTAATTCGCCACCGGCGAGAATGATGCGAAAATCTTCTTTTCCCATCAACGTGTTAGCAACGTT‑GAGATTGTTGGTGACAATGCGCAAATTGCTGGGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTG‑CCGATATCGATAAACAGCGGCGAGCCATTGGGG‑ATTTGTTCCG‑CCACTTTGCGGACGATgcg < 2:280166/251‑1 (MQ=255) aaaaTCGAGCGTCGCTTCGCCAATGATCCCGCCATCGCGGCTGCGTAATTCGCCACCGGCGAGAATGATGCGAAAATCTTCTTTTACCATCAACGTGTTAGCAACGTT‑GAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTG‑CCGATATCGATAAACAGCGTCGAGCCATTGGGG‑ATTTGCTCCG‑CCACTTTGCGGACGATGCGCTCTTTttctt > 1:229814/1‑251 (MQ=255) cGAGCGTCGCTTCGCCAATGATCCCGCCATCGCGGCTGCGTAATTCGCCACCGGCGAGAATGATGCGAAAATCTTCTTTTACCATCACCGTGTTAGCAACGTT‑GAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTG‑CCGATATCGATAAACAGCGTCGAGCCATTGGGG‑ATTTGCTCCG‑CCACTTTGCGGACGATGCGCTCTTTTTCTTCGGTc > 2:245431/1‑251 (MQ=255) gAGCGTCGCTTCGCCAATGATCCCGCCATCGCGGCGGCGTAATTCGCCACCGGCGAGAATGATGCGAAAATCTTCTTTTACCATCAACGTGTTAGCAACGTT‑GAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTG‑CCGATATCGATAAACAGCGTCGAGCCATTGGGG‑ATTTGCTCCG‑CCACTTTGCGGACGATGCGCTCTTTTTCTTCGGTCt < 1:484757/251‑1 (MQ=255) cGTCGCTTCGCCAATGATCCCGCCATCGCGGCTGCGAAATTCGCCACCGGCGAGAATGATGCGAAAATCTTCTTTTACCATCAACGTGTTAGCAACGTT‑GAGATTGTTGGTGACAATGCGCCAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTG‑CCGATATCGATAAACAGCGTCGAGCCATTGGGG‑ATTTGCTCCG‑CCACTTTGCGGACGATGCGCTCTTTTTCTTCGGTCTggg > 1:149382/1‑251 (MQ=255) cGTCGATTCGCCAATGATCCCGCCATCGCGGCTGCGTAATTCGCCACCGGCGAGAATGATGCGAAAATCTTCTTTTACCATCCACGTGTTAGCACCGTT‑GAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTG‑CCGATATCGATACACAGCGTCGAGCCATTGGGG‑ATTTGCTCCG‑CCACTTTGCGGACGATGCGCTCTTTTTCTTCGGTCTggg > 2:203499/1‑251 (MQ=255) cGCCAAAGATCCCGCCCTCGCTGCGGCGTAATTCGCCACCTGCGAGAATGATGCGAAAATCGTCTTTTCCCAACAACGTGTTAGCAACGTT‑GAGATTGTTGGTGACAAGGCGCAATTTGCTGTGATTGAGCAGTGCGTGCGCTCCCGCTTCCGGCGTGTGG‑CCGATAGCGATAAACGGCGTCGAGCCTTTGGGG‑ATTTGCTCCG‑CCACTTTGCGGACGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCtt < 2:314128/250‑1 (MQ=255) gCCAATGATCCCGCCATCGCGGCTGCGTAATTCGCCACCGGCGAGAATGATGCGAAAATCTTCTTTTACCATCAACGTGTTAGCAACGTT‑GAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTG‑CCGATATCGATAAACAGCGTCGAGCCATTGGGG‑ATTTGCGCCG‑CCACTTTGCGGACGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGc < 1:313618/251‑1 (MQ=255) gCCAATGATCCCGCCATCGCGGCTGCGTAATTCGCCACCGGCGAGAATGATGCGAAAATCTTCTTTTACCACCAACGTGTAAGCAACGTT‑GAGATTGTGGGTGACAAGGCGCAAATTGCTGTGATTGAGCAGTGCGGGCGCTACCGCTTCCGGCGTGGTG‑CCAATATCGATAAACAGCGTCGAGCCATTGGGG‑ATTTGCTCCG‑CCACTTTGCGGACGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGc < 2:136063/251‑1 (MQ=255) aTGATCCCGCCATCGCGGCTGCGTAATTCGCCACCGGCGAGAATGATGCGAAAATCTTCTTTTACCATCAACGTGTTAGCAACGTT‑GAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTG‑CCGATATCGATAAACAGCGTCGAGCCATTGGGG‑ATTTGCTCCG‑CCACTTTGCGGACGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATc < 1:421010/251‑1 (MQ=255) gATCCCGCCATCGCGGCTGCGTAATTCGCCACCGGCGAGAATGATGCGAAAATCTTCTTTTACCATCAACGTGTTAGCAACGTT‑GAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTG‑CCGATATCGATAAACAGCGTCGAGCCATTGGGG‑ATTTGCTCCG‑CCACTTTGCGGACGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGt < 1:468837/251‑1 (MQ=255) gccaccctggCTGCGTAATGCGCCACCGGCGAGAATGATGCGAAAATCTTCTTTTACCACCAACTTGTTAGCAATGTG‑TAGATTGTTGGTGACAAGGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTG‑CCTAGATCGATAAACGGCGTCGAGCCATTGGGG‑ATTTGCTCCG‑CCACTTTGCGGACGATGCGCTCTTTTTCGTCGGTCTGGGTGGCCTTGCGATCGTTCCACg < 2:443718/243‑1 (MQ=255) cATCCCGGCTGCGTAATTCGCCACCGGCGAGAATGAGGCAAAAATCTTCTTTTACCACAAACGTGTTAGCAACGTT‑GAGATGGTTGGTGACAATGCGCAAATTGCTGTTATTGAGCAGGGCGTGCGCTCCCGCTTCCGGCGTGGTG‑CCGATATCGATAAACAGCGTCGAGCCATTGGGG‑ATTTGCTCCG‑CCACTTTGCGGACGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGc < 2:293107/251‑1 (MQ=255) accgcgGCTGCGTAATTCGCCACCGGCGGGAATGATGCGAAAATCTTTTTTTACCATCAAGGGGGTAGCAACTTT‑GAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGGTCTCGCTTCCGGCGGGGGG‑CCGATATTGATAAACGGTGTCGAGTCATTGGGG‑ATTTGCTCCG‑CCACTTTGCGTACGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCg < 1:457102/249‑1 (MQ=255) gTAATTCGCCACCGGCGAGAATGATGCGAAAATCTTCTTTTACCATCACCGTGTTAGCAACGTG‑GAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGATCAGTGCGTGCGCTACCGTTTCCGGCGTGGTG‑CCGATATCGATAAACAGCGCCGAGCCATTGGGG‑ATTTGCTCCG‑CCACTTTGCGGACGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGaa < 2:136375/251‑1 (MQ=255) gTAATTCGCCACCGGCGAGAATGATGCGAAAATCTTCTTTTACCATCAACGTGTTAGCAACGTT‑GAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTG‑CCGATATCGATAAACAGCGTCGAGCCATTGGGG‑ATTTGCTCCG‑CCACTTTGCGGACGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGa > 1:267677/1‑250 (MQ=255) aaTTCGCCACCGGCGAGAATGATGCGAAAATCTTCTTTTACCATCAACGTGTTAGCAACGTT‑GAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTG‑CCGATATCGATAAACAGCGTCGAGCCATTGGGG‑ATTTGCTCCG‑CCACTTTGCGGACGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACt > 1:92261/1‑251 (MQ=255) cGCCACCGGGGAGAATGAGGCGAAAATCTTCTTTTACCAGAATCGTGTGAGCAACGTT‑GAGATTGTTGGTGCCAATGCGCAAATTGCTGTGATTGAGCAGGGCGTGCGATACCGCTTCCGGCGTGGTG‑CCGATATCGAAAAACAGCGTCGAGCCATTGGGG‑ATTTGCTCCG‑CCACTTTGCGGACGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGaa < 2:137965/251‑1 (MQ=255) ccGGGGAGAAGGATGCGAAAACCTTCTTTTCCCATAAACGTGTTAG‑AATGTTTGAGATTGTTGGTGACAATGCGCTAATTGCTGTGATTGAGCAGTGCGGGCGCTACCGCTTCCGGCGGGGGG‑CCGATATCGATAAACAGCGCCGAGCCATTGGGG‑ATTGGCTCCG‑CCACTTTGCGGACGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAg < 2:229814/251‑1 (MQ=255) cGAGAATGATGCGAAAATCTTCTTTTACCATCAACGTGTTAGCAACGTT‑GAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTG‑CCGATATCGATAAACAGCGTCGAGCCATTGGGG‑ATTTGCTCCG‑CCACTTTGCGGACGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGcgcc > 1:152417/1‑251 (MQ=255) aaaTTTTCTTTTACCAACAACGGTTTAGAAACGTT‑GGGTTTGTGGGTGAAAAGGCGAAAATTGCGGTGATTGAGCAGGGGGGGCGCTCCCGCTCCCGGGGGGGGG‑CCGATATCGAAAAACAGGGGCGAGC‑ATTGGGGGATTTGCTCCG‑CCACTTTGCGGACGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCatgatg < 2:38888/251‑1 (MQ=255) ttttACAATCAACGAGTTAGCAACGTT‑GAGATTGTTGGCGACAATGCGCAAATTGCTGTGATTGAGCAGTGAGTGCGCTACCGCTTCCGGCGAGGTG‑CCGATATCGAAAAACAACGTCGAGCCATTGGGG‑ATGGGCTCGG‑CCACGTTGCGGACGATGCGCTCTTTTTATTCGGCATGTGTGGCCTTGCGATCGTACCAAGGCGTGTTAACCGAACTGGGAGGCAGCGCCGCACCCACATGATGGcgcaggg > 2:258242/1‑245 (MQ=255) cATCAACGTGTTAGCAACGTT‑GAGATTGTTGGTGACAATGCGCAATTTGCTGTGATTGAGCAGTGAGTGCGCTACCGCTTACGGCGTGGTG‑CCGATATCGAGAACAAGCGTCGAGCCATTGGGG‑CTTTGCTCCG‑CCACTTTGCGGACGGTGCGCTCTGTTTCTTCGGTCTGGGTGACCTTGAGATCGTGCCACGGCGAGTTAACAGGACTGGAAGGCAGACCCGCACCGCCaaaaaggagcaggatccagg > 2:278535/1‑232 (MQ=255) gtgtTAGCAACGTT‑GAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTG‑CCGATATCGATAAACAGCGTCGAGCCATTGGGG‑ATTTGCTCCG‑CCACTTTGCGGACGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTc > 1:438611/1‑251 (MQ=255) gtTAGCAACTTT‑GATATTGTTGGTGACAATGCGCAAATTGCTGTGATTGGGCAGTGCGTGCGCTACCGCTTCGGGCG‑GGTGGCCGATATCGATAAACGGCTTCGAGCAATTGGTG‑TTTTGCTCCG‑CCACTTTGCGGACGATGCGCGCTTTTTCTTCGTTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCTAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCg < 1:199071/251‑1 (MQ=255) aaCGTT‑GAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTG‑CCGATATCGATAAACAGCGTCGAGCCATTGGGG‑ATTTGCTCCG‑CCACTTTGCGGACGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCt > 1:34261/1‑251 (MQ=255) cGTT‑GAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTG‑CCGATATCGATAAACAGCGTCGAGCCATTGGGG‑ATTTGCTCCG‑CCACTTTGCGGACGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTc > 1:403270/1‑250 (MQ=255) agaTTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTG‑CCGCTATCGATAAACAGCGTCGAGCCATTGGGG‑ATTTGCTCCG‑CCACTTTGCGGACGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGCTCGTGCCACGGCGTGTTAACCGAACTGGCAGGCAGCGCCGCACCGCCATGATGGCGCCGGATCAGGTTTTTCTCCGCCCGCTCATTg > 2:85535/1‑249 (MQ=255) tgGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTG‑CCGATATCGATAAACAGCGTCGAGCCATTGGGG‑ATTTGCTCCG‑CCACTTTGCGGACGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCCTGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCgcgg > 2:445859/1‑251 (MQ=255) tGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTG‑CCGATATCGATAAACAGCGTCGAGCCATTGGGG‑ATTTGCTCCG‑CCACTTTGCGGACGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCgcggcg > 1:212766/1‑250 (MQ=255) cAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTG‑CCGATATCGATAAACAGCGTCGAGCCATTGGGG‑ATTTGCTCCG‑CCACTTTGCGGACGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAAt > 2:85024/1‑250 (MQ=255) aTGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTG‑CCGATCTCGATAAACAGCGTCGAGCCATTGGGG‑ATTTGCTCCG‑CCACTTTGCGGACGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGt > 1:205599/1‑251 (MQ=255) gATTGAGCAGTGCGTGAGCTACCGCTTCCGGCGTGGTG‑CCGATATCGATAAACAGCGTCGAGCCATTGGGG‑ATTTGCTCCG‑CCACTTTGCGGACGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGGGGTAGCGGCGACTAGTCTGCGGGCTGACgg > 2:102939/1‑249 (MQ=255) gcgtgcgCTCCCGCTCCCGGCTGGGTC‑CCGATATCAATAACCAGCGTCGGCCCATTGGGG‑GTTTGCTCCG‑CCACTTTGCGGACGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTTTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAA‑ATGCTCTAc < 1:409653/251‑1 (MQ=255) gcTACCGCTTCCGGCGTGGTG‑CCGATATCGATAAACAGCGTCGAGCCATTGGGG‑ATTTGCTCCG‑CCACTTTGCGGACGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGCAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCCGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAT‑ATGCTCTACAAGctc > 2:318568/1‑251 (MQ=255) ccgggcgggggacagATATGGAAAAACAGGGTCGA‑CCATTGGGG‑GTTTGGTCCGGCCACTTTGCGGACGATGCGCTCTTTTCCTTCGGTGTGGGTGGCCTTGCGATCGTGCCACGGCGTTTTACCCGAACGGGAAGGCGGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAA‑ATGCTCTACCAGCTCTTCGGTa < 2:236679/235‑1 (MQ=255) ccGGCGGGGTG‑CATATATCAAAAAACAGCGTCGGGCCATTGGGG‑TTTTGCCCCG‑CCACTTTGCGGACGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAA‑ATGCTCTACCAGCTCTTCGGTACt < 1:479921/250‑1 (MQ=255) ccGGCGGGGGG‑CCAATATCGATAAACGGCGCCGGGCAATGGGGG‑TTTTGCTCCG‑CCACTTGGCGGACGATGCGCTCTTTTTCTTCGGTCGGGGTGGCCTGGCGATCGTGCCACGGCGTGTTACCCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAA‑ATGCTCTACCAGCTCTTCGGTACTg < 1:245431/251‑1 (MQ=255) tg‑CCGATAACGCTAAACAGCGTCAAGCCATTGGGG‑ATTTGCTCCG‑CCACTTTGCGGACGAAGCGCTCTTTTTCTTCGGTCTGGGTGGCCTAGCGATCGTGCCACGGCGCGTTAACCGAACTGGAAGGCATCGCGGCACCACCAAGATGGCGCAGGATCAGGATTTGCTCCGCCAGCTCATTGAGGGCACGACGAATCATCTGCGGGCTGACGGAGAA‑ATGCTCTAACAAGTCTTCGGTAcggccatcaccc > 2:436504/1‑240 (MQ=255) ggctgattacgaaaagcggCGTCGAGCCATTGGGG‑TTTTCCCCCG‑CCACTTTGCGGACGATGCGCTCTTTTTCTTCGGTCGGGGGGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAA‑ATGCTCTACCAGCTCTTCGGTACTGACATAAccc < 1:445859/233‑1 (MQ=255) ccGATATCGATAAACAGCGTCGAGCCATTGGGG‑ATTTGCTCCG‑CCACTTTGCGGACGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAAACGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCCGCTCATTGAGGTCGCGGCGAATAGACTGCGGGCTGACGGAGAA‑ATGCTCTACCAGCTCTTCGGTAATGACATAACCctt > 1:285036/1‑250 (MQ=255) atatCGAAAAACAGCTTCGAGCCATTGGGG‑ATTTGCTCCG‑CCACTTTGCGGACGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAA‑ATGCTCTACCAGCTCTTCGGTACTGACATAACCctgctg < 1:27026/251‑1 (MQ=255) gataaccggctgcgggCCATGGGGG‑TTTTGCTCCG‑CCACTTTGCGGACGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAA‑ATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTaa < 1:411853/236‑1 (MQ=255) gATAAACCGAGTCGAGCCATTGGGG‑ATTTGCTCCG‑CCACTTTGCGGGAGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACAGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCCGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGGCTGCGGGCGGACGGGGAACATG‑TATACCAGCTCTTCGGTACTGAAATAACCCTGCTGTTTa > 2:56022/1‑250 (MQ=255) gATAAACAGCGTCGAGCCATTGGGG‑ATTTGCTCCG‑CCACTTTGCGGACGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCCGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGCCGGAGAA‑ATGCTCTACCAGCTCTTCGGTACTGACATAACCCTTCTGTTTa > 2:122443/1‑250 (MQ=255) cGAGCCATTGGGG‑ATTTGCTCCG‑CCACTTTGCGGACGCTGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGACCTGGAAGGCAGCGCCGCACCGCCATGGTGGCGAAGGACCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGTCGACTATTCTCCGGGCTGCCGTGGAA‑ATGCACTACCAACTCTTCGTTACTGACCTAACCCTGCTGTTTAACCAGTTCGata > 2:247380/1‑250 (MQ=255) gccccG‑CCACTTTGCGGACGAGGCTCTCTTTTTCTGCGGTCTGGGTGGCCTGGCGATCGTGCCACGGCGTGTTAACCGAACGGGAAGGCAGCGCCGAACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAA‑ATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTtg < 1:122443/247‑1 (MQ=255) ccgtcACTTTGCGGACGATGCGCTCTTTTTCTTCGGTCGGGGTGGCCTTGCGATGGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAA‑ATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTtgtg < 1:385351/245‑1 (MQ=255) ccctcTTTGCGGACGATGCGCTTTTTTTCGTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTACCCGAACTGGAAGGCAGCGCCGCCCCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAA‑ATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTTACGTTGtgtttg < 1:425714/247‑1 (MQ=255) ccccTTTGCGGCCGAGGCGCTCTTTCGCTTCGGTCTGGGTGTCCTGGCGATCGGGCCACGGCGTGTTAACCGAACTGGAAGGCAGGCCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAA‑ATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGtgttt < 1:203499/246‑1 (MQ=255) tggCGGCCGATGCGCTCTTTTTCTTGGGGTGGGGTGGCCTGGCGAGCGTGCCCCGGGGTGTTACCCGAACTGGAAGGCTGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAA‑ATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTGCGATAATACCGTTGTGACGTTGTGTTTGTTTCa < 2:205599/248‑1 (MQ=255) | AACTGGGAGATAAAATCGAGCGTCGCTTCGCCAATGATCCCGCCATCGCGGCTGCGTAATTCGCCACCGGCGAGAATGATGCGAAAATCTTCTTTTACCATCAACGTGTTAGCAACGTT‑GAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTG‑CCGATATCGATAAACAGCGTCGAGCCATTGGGG‑ATTTGCTCCG‑CCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGC‑CAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAA‑ATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCA > NC_000913/3560119‑3560604 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |