| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,204,395 | T→A | intergenic (+106/‑201) | yehK → / → yehL | uncharacterized protein YehK/putative AAA(+) MoxR family ATPase YehL |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,204,395 | 0 | T | A | 95.5% | 62.6 / NA | 22 | intergenic (+106/‑201) | yehK/yehL | uncharacterized protein YehK/putative AAA(+) MoxR family ATPase YehL |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base A (8/13); total (8/14) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TAATAAATGATGCGTTGATTTATATAAGAGATGAGTGTATTGATGAGCGGAAATTACGAGGTGAATCACCTGAAACTGTAATAGCAATTTTTAATCGTGAACTACAGAATATATTCAACCAAGAAATAGAATAATATACTCTAAATAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAATACATTTCAGGGAT > NC_000913/2204156‑2204589 | taataaATGATGCGTTGATTTATATAAGAGATGAGTGTATTGATGAGCGGAAATTACGAGGTGAATCACCTGAAACTGTAATAGCAATTTTTAATCGTGAACTACAGAATATATTCAACCAAGAAATAGAATAATATACTCTAAATAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAAATCGTTCGTTgg > 1:483269/1‑251 (MQ=255) aataaATGATGCGTTGATTTATATAAGAGATGAGTGTATTGATGAGCGGAAATTACGAGGTGAATCACCTGAAACTGTAATAGCAATTTTTAATCGTGAACTACAGAATATATTCAACCAAGAAATAGAATAATATACTCTAAATAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATAAATCTCATTATCGTAATTGCAACGGGGTCCAGCCGTGGTTATAAATCGTTCGTTgg < 1:383577/250‑1 (MQ=255) atgatgCGTTGATTTATATAAGAGATGAGTGTATTGATGAGCGGAAATTACGAGGTGAATCACCTGAAACTGTAATAGCAATTTTTAATCGTGAACTACAGAATATATTCAACCAAGAAATAGAATAATATACTCTAAATAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAAATCGTTCGTTGGAACACg > 1:436723/1‑251 (MQ=255) gTTGATTTATATAAGAGATGAGTGTATTGATGAGCGGAAATTACGAGGTGAATCACCTGAAACTGTAATAGCAATTTTTAATCGTGAACTACAGAATATATTCAACCAAGAAATAGAATAATATACTCTAAATAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAAATCGTTCGTTGGAACACGATGTTGc < 1:256519/251‑1 (MQ=255) tttATATAAGAGATGCGGGTATTGATGAGCGGAAATTACGAGGTGAATCACCTGAAACTGTAATAGCAATTTTTAATCGTGAACTACAGAATATATTCAACCAAGAAATAGAATAATATACTCTAAATAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCAAGCCGTGGTTATAAATCGTTCGTTGGAACACGATGTTGCAAAgg > 2:435023/1‑251 (MQ=255) aaGAGATGAGTGTATTGATGAGCGGAAATTACGAGGTGAATCACCTGAAACTTTAATAGCAATTTTTAATCGTGAACTACAGAATATATTCAACCAAGAAATAGAATAATATACTCTAAATAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAAATCGTTCGTTGGAACACGATGTTGCACAGGTTgtgg < 1:1878/250‑1 (MQ=255) tGAGTGTATTGATGAGCGGAAATTACGAGGTGAATCACCTGAAACTGTAATAGCAATTTTTAATCGTGAACTACAGAATATATTCAACCAAGAAATAGAATAATATACTCTAAATAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAAATCGTTCGTTGGAACACGATGTTGCACAgg < 1:418519/238‑1 (MQ=255) tGAGTGTATTGATGAGCGGAAATTACGAGGTGAATCACCTGAAACTGTAATAGCAATTTTTAATCGTGAACTACAGAATATATTCAACCAAGAAATAGAATAATATACTCTAAATAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAAATCGTTCGTTGGAACACGATGTTGCACAgg > 2:418519/1‑238 (MQ=255) gAGTGTATTGATGAGCGGAAATTACGAGGTGAATCACCTGAAACTGTAATAGCAATTTTTAATCGTGAACTACAGAATATATTCAACCAAGAAATAGAATAATATACTCTAAATAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAAATCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGc < 1:483824/251‑1 (MQ=255) aTTGATGAGCGGAAATTACGAGGTGAATCACCTGAAACTGTAATAGCAATTTTTAATCGTGAACTACAGAATATATTCAACCAAGAAAGAGAATAATATACTCTAAATAATTCAAATTGGTCCGATCCGGCGCAACGGCCCAATGGCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAAATCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGaa < 2:345182/250‑1 (MQ=255) gatgaGCGGAAATTACGAGGTGAATCACCTGAAACTGTAATAGCAATTTTTAATCGTGAACTACAGAATATATTCAACCAAGAAATAGAATAATATACTCTAAATAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAAATCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAAt > 1:253174/1‑250 (MQ=255) gCAATTTTTAATCGTGAACTACAGAATATATTCAACCAAGAAATAGAATAATATACTCTAAATAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAAATCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTtttattt > 1:138258/1‑250 (MQ=255) gTGAACTACAGAATATATTCAACCAAGAAATAGAATAATATACTCTAAATAATTCAAATTGGTCCGACCCGGCGCAACTTCCCAATGGCCTGGATTATAAAGCTCATTAGCTTAATGGCAATGGTGTCCATCCGTGGTTATAAATCGTGCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTTCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCtt < 1:304306/251‑1 (MQ=255) aaaTATATTCAACCAAGAAACAGAATAATATACTCTAAATAAATCAAATTGTTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAAATCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTTAAAATAGTAAATAAAATAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGatatg < 1:377054/250‑2 (MQ=255) aataatATACTCTAAATAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAAATCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATgcgc > 1:342998/1‑251 (MQ=255) ataCTCTAAATAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATAAATCTCATTAGCTTAATTGCAACGGGGTCCAGCCGTGGTTATAAATCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAAc < 1:475807/250‑1 (MQ=255) aataatTCAAATTGGACCGATCCGGCGCAACGTCCCAATGGCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAAATCGTTCGTTGGAACACGATGTTGCACAGGATGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTACAGATATTTTTCGCTCTAACAACTAATGCGCCAAACATTTATTgt > 1:331328/1‑250 (MQ=255) tggtactaTCCGTCGCAACGTCCCAATGGCCTGGATTATAAATCTCATTATCTTAAGTGCAACGGGGTCCAGCCGTGGTTATAAATCGTTCGTTGGAACACGATGTTTCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAatat < 1:93332/243‑1 (MQ=255) ccGAACCGGCGCAACGTCCCAATGGCCTGGATTATAAAACTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTAAAAAACGTTCGTTGGAACACTATGTTGCACAGGCTGGGGTGATAGGCCTGAAAATAGTAAATAAAAGAACCTGCCACACCAGCAGGTTTTTTTAGTTATTGTGATCTGCTTTCCAGATATTTGTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGttt < 1:285195/251‑1 (MQ=255) cggcgaatcgccccAATGGCCTGGATTAAAAATCTCATTATCTGACTTGCAACGTGGTCCATCCGTGGTTAGAATTCGTTCGTTTGAACACGATGATGCACAAGCTGTTGTGTTAGGCCTGAAAATAGTAAATAAAAGTACCTGCCTCACCAGCAGGTTTTTTCATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGTCAAACATTTATTGCGCGTAAAATATCGTGTATTTc < 1:286526/239‑1 (MQ=255) cGTCCCAATGGCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAAATCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAATACa < 2:223130/251‑1 (MQ=255) gCCTGGTTTATAAAGCCTATTAACTGAATTGAAACGGGGTTCAGCCGTGGTTATAAATCGTGCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGACAAACATTTATTGCGTGTAAAATATCGTTTATTTCATTAATACATTGCAGGGAt < 2:76944/251‑1 (MQ=255) | TAATAAATGATGCGTTGATTTATATAAGAGATGAGTGTATTGATGAGCGGAAATTACGAGGTGAATCACCTGAAACTGTAATAGCAATTTTTAATCGTGAACTACAGAATATATTCAACCAAGAAATAGAATAATATACTCTAAATAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAATACATTTCAGGGAT > NC_000913/2204156‑2204589 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |