| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,075,528 | C→T | A1119T (GCA→ACA) | putA ← | fused DNA‑binding transcriptional repressor/proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase PutA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,075,528 | 0 | C | T | 94.9% | 213.7 / ‑1.1 | 78 | A1119T (GCA→ACA) | putA | fused DNA‑binding transcriptional repressor/proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase PutA |
| Reads supporting (aligned to +/- strand): ref base C (1/3); new base T (35/39); total (36/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.20e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01 | |||||||||||
GCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGTTCACCCGTCGGCCCCGGCAGCAATCGTTGTGTTCCTGCCTGCGCCAGCTCGCCATATTGCGTACATAACGCCTGCAATTCTGGACGATTTGCTGCCCATTCCCGCAGTGCATTTAGCGGCTGAGTCAATGCGGCTTTCAACTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGCCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGGTACCGGACAACCCTTCGCCGCCGAACGGCTGCACACCAACCACTGCGCCCACCATATTACGGTTAACATACAGGTTACCAACATGGGCCGAGCCAGTGACCTGGGCGATGGTTTCATCAATGCGCGTATGGACGCCAAGCGTCAGACCATAACCGGAAGCGTTAATCTGCTCGAT > NC_000913/1075282‑1075771 | gCTCATCATCGGCAATACACAACCCGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGTTCACCCGTCGGCCCCGGCAGCAATCGTTGTGTTCCTGCCTGCGCCAGCTCGCCATATTGCGTACATAACGCCTGCAATTCTGGACGATTTGCTGCCCATTCCCGCAGTGCATTTAGCGGCTGAGTCAATGCGGCTTTCAACTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAg < 1:366953/250‑1 (MQ=255) catcatCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGTTCACCCGTCGGCCCCGGCAGCAATCGTTGTGTTCCTGCCTGCGCCAGCTCGCCATATTGCGTACATAACGCCTGCAATTCTGGACGATTTGCTGCCCATTCCCGCAGTGCATTTAGCGGCTGAGTCAATGCGGCTTTCAACTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAgcgc < 1:240168/250‑1 (MQ=255) catcatCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGTTCACCCGTCGGCCCCGGCAGCAATCGTTGTGTTCCTGCCTGCGCCAGCTCGCCATATTGCGTACATAACGCCTGCAATTCTGGACGATTTGCTGCCCATTCCCGCAGTGCATTTAGCGACTGAGTCAATGCGGCTTTCAACTGCGCATCGACCGGATACTTTGCATCCTAACGCGCGAGCGACAC‑CGTCAgcgcc > 2:409762/1‑250 (MQ=255) atcGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGTTCACCCGTCGGCCCCGGCAGCAATCGTTGTGTTCCTGCCTGCGCCAGCTCGCCATATTGCGTACATAACGCCTGCAATTCTGGACGATTTGCTGCCCATTCCCGCAGTGCATTTAGCGGCTGAGTCAATGCGGCTTTCAACTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACttt < 1:403427/251‑1 (MQ=255) cGGCAATACTCAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGTTCACCCGTCGGCCCCGGCAGCAATCGTTGTGTTCCTGCCTGCGCCAGCTCGCCATATTGCGTACATAACGCCTGCAATTCTGGACGATTTGCTGCCCATTCCCGCAGTGCATTTAGCGGCTGAGTCAATGCGGCTTTCAACTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACTTTcc < 1:318698/251‑1 (MQ=255) gCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGTTCACCCGTCGGCCCCGGCAGCAATCGTTGTGTTCCTGCCTGCGCCAGCTCGCCATATTGCGTACATAACGCCTGCAATTCTGGACGATTTGCTGCCCATTCCCGCAGTGCATTTAGCGGCTGAGTCAATGCGGCTTTCAACTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCCGCGCGCTTTCCgg > 2:234025/1‑251 (MQ=255) acaacaCGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGTTCACCCGTCGGCCCCGGCAGCAATCGTTGTGTTCCTGCCTGCGCCAGCTCGCCATATTGCGTACATAACGCCTGCAATTCTGGACGATTTGCTGCCCATTCCCGCAGTGCATTTAGCGGCTGAGTCAATGCGGCTTTCAACTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGCCAGCGCACTTTCCGGGCGATTc < 1:141171/251‑1 (MQ=255) cgGCAGCAGCGTCCAGGTGTTGCGTTCACCCGTCGGCCCCGGCAGCAATCGTTGTGTTCCTGCCTGCGCCAGCTCGCCATATTGCGTACATAACGCCTGCAATTCTGGACGATTTGCTGCCCATTCCCGCAGTGCATTTAGCGGCTGAGTCAATGCGGCTTTCAACTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTaga < 1:404442/251‑1 (MQ=255) ggCAGCAGCGTCCAGGTGTTGCGTTCACCCGTCGGCCCCGGCAGCAATCGTTGTGTTCCTGCCTGCGCCAGCTCGCCATATTGCGTACATAACGCCTGCAATTCTGGACGATTTGCTGCCCATTCCCGCAGTGCATTTAGCGGCTGAGTCAATGCGGCTTTCAACTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACttt < 2:77727/223‑1 (MQ=255) ggCAGCAGCGTCCAGGTGTTGCGTTCACCCGTCGGCCCCGGCAGCAATCGTTGTGTTCCTGCCTGCGCCAGCTCGCCATATTGCGTACATAACGCCTGCAATTCTGGACGATTTGCTGCCCATTCCCGCAGTGCATTTAGCGGCTGAGTCAATGCGGCTTTCAACTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACttt > 1:77727/1‑223 (MQ=255) gcagcGTCCAGGTGTTGCGTTCACCCGTCGGCCCCGGCAGCAATCGTTGTGTTCCTGCCTGCGCCAGCTCGCCATATTGCGTACATAACGCCTGCAATTCTGGACGATTTGCTGCCCATTCCCGCAGTGCATTTAGCGGCTGAGTCAATGCGGCTTTCAACTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTAGAGATag < 2:80674/251‑1 (MQ=255) gcGTCCAGGTGTTGCTTTCACCCGTCGGCCCCGGCAGCAATCGTTGTGTTCCTGCCTGCGCCAGCTCGCCATATTGCGTACATAACGCCTGCAATTCTGGACGATTTGCTGCCCATTCCCGCAGTGCATTTAGCGGCTGAGTCAATGCGGCTTTCAACTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTAGAGATAGAGc < 1:105513/251‑1 (MQ=255) cGTCCAGGTGTTGCGTTCACCCGTCGGCCCCGGCAGCAATCGTTGTGTTCCTGCCTGCGCCAGCTCGCCATATTGCGTACATAACGCCTGCAATTCTGGACGATTTGCTGCCCATTCCCGCAGTGCATTTAGCGGCTGAGTCAATGCGGCTTTCAACTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACTTTcc < 1:310213/217‑1 (MQ=255) cGTCCAGGTGTTGCGTTCACCCGTCGGCCCCGGCAGCAATCGTTGTGTTCCTGCCTGCGCCAGCTCGCCATATTGCGTACATAACGCCTGCAATTCTGGACGATTTGCTGCCCATTCCCGCAGTGCATTTAGCGGCTGAGTCAATGCGGCTTTCAACTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACTTTcc > 2:310213/1‑217 (MQ=255) tCCAGGTGTTGCGTTCACCCGTCGGCCCCGGCAGCAATCGTTGTGTTCCTGCCTGCGCCAGCTCGCCATATTGCGTACATAACGCCTGCACTTCTGGACGATTTGCTGCCCATTCCCGCAGTGCATTTAGCGGCTGAGTCAATGCGGCTTTCAACTGCGCATCGACCGGATACTTTGCATCATGACGCGAGAGCGTCAC‑TGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTAGAGATagctcgg > 2:118930/1‑245 (MQ=255) cAGGTGTTGCGTTCACCCGTCGGCCCAGGCAGCAATCGTTGTGTTCCTGCCTGCGCCAGCTCGCCATATTGCGTACATAACGCCTGCAATTCTGGACGATTTGCTGCCCATTCCCGCAGTGCATTTAGCGGCTGAGTCAATGCGGCTTTCAACTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGGAGAGATAGAGCGGAcc > 1:380862/1‑251 (MQ=255) aGGTGTTGCGTTCACCCGTCGGCCCCGGCAGCAATCGTTGTGTTCCTGCCTGCGCCAGCTCGCCATATTGCGTACATAACGCCTGCAATTCTGGACGATTTGCTGCCCATTCCCGCAGTGCATTTAGCGGCTGAGTCAATGCGGCTTTCAACTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTAGAGATAGAGCGGACCg < 1:429987/251‑1 (MQ=255) gtgtGGCGTTCACCCGCCGGCACCGTCAGCAAGCGTTGTGTTCCTTCCTGCGCCAGCTCGCCATATTGCGTACATAACGCCGGCAATTCTGGACGATTTGCTGTCCATTCCCGCAGTGCATTTAGCGGCTGAGTCAATGCGGCTTTCAACTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTAGAGATAGAGCGGACCGcc < 2:286552/251‑1 (MQ=255) ggCAGCAATCGTTGTGTTCCTGCCTGCGCCAGCTCGCCATATTGCGTACATAACGCCTGCAATTCTGGACGATTTGCTGCCCATTCCCGCAGTGCATTTAGCGGCTGAGTCAATGCGGCTTTCAACTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGAAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGGTCCCGGACa > 2:256116/1‑250 (MQ=255) gatattCGTTGTGTTCCTGCCGGCGCCAGCTCGCCATATTGCGTACATAACGCCTGCAATTCTGGACGATTTGCTGCCCATCCCCGCAGTGCATTTAGCGGCTGAGTCAATGCGGCTTTCAACTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACTTTCCGGGCGATTCGGCAGCAGACGGTAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGTTACCGGATAAccc < 2:121715/246‑1 (MQ=255) agcaATCGTTGTGTTCCTGCCTGCGCCAGCTCGCCATATTGCGTACATAACGCCTGCAATTCTGGACGATTTGCTGCCCATTCCCGCAGTGCATTTAGCGGCTGAGTCAATGCGGCTTTCAACTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGGTACCGGACAAccc > 1:147984/1‑251 (MQ=255) caATCGTTGTGTTCCTGCCTGCGCCAGCTCGCCATATTGCGTACATAACGCCTGCAATTCTGGACGATTTGCTGCCCATTCCCGCAGTGCATTTAGCGGCTGAGTCAATGCGGCTTTCAACTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGGTACCGGACAACCCtt < 1:429448/251‑1 (MQ=255) atgcGTTGTGTTCCTGCCTCCGCCAGCTCGCCATATTGCGTACATAACGCCTGCAATTCTGGACGATTTGCTGCCCATGCCCGCAGTGCATTTAGCGGCTGAGTCAATGCGGCTTTCAACTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCCC‑TGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGGTACCGGACAACCCTTc < 2:431271/248‑1 (MQ=255) ggtggtgtCCCTGCCCGCGCCAGCCCGCCATATTGCGCACATAACGACTGAAAGTCTGGACGATTTGCTGCCCATCCCCGCAGTGCATTTAGCGGCTGAGTCAATGCGGCTTTCAACTGCGCATCGCCCGGATACTTTGCATCCGGACGCGCGAGCGTCAC‑TGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGGTACCGGACAACCCTTcgcc < 2:1455/247‑1 (MQ=255) gTTGTGTTCCTGCCTGCGCCAGCTCGCCATATTGCGTACATAACGCCTGCAATTCTGGACGATTTGCTGCCCATTCCCGCAGTGCATTTAGCGGCTGAGTCAATGCGGCTTTCAACTGCGCCTCGACCGGCTACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTAGAGATCGAGCGGACCGCCTGCTTTCGGCCCGGTACCGGCCAACCCTTcgccc > 2:98866/1‑250 (MQ=255) gTTGTGTTCCTGCCTGCGCCAGCTCGCCATATTGCGTACATAACGCCTGCAATTCTGGACGATTTGCTGCCCATTCCCGCAGTGCATTTAGCGGCTGAGTCAATGCGGCTTTCAACTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGGTACCGGACAACCCTTcgccg > 2:333811/1‑251 (MQ=255) gcgcCAGCTCGCCATATTGCGTACATAACGCCTGCAATTCTGGACGATTTGCTGCCCATTCCCGCAGTGCATTTAGCGGCTGAGTCAATGCGGCTTTCAACTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGGTACCGGACAACCCTTCGCCGCCGAACGGCTGca < 1:227926/249‑1 (MQ=255) ccAGCTCGCCATATTGCGTACATAACGCCTGCAATTCTGGACGATTTGCTGCCCATTCCCGCAGTGCATTTAGCGGCTGAGTCAATGCGGCTTTCAACTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGGTACCGGACAACCCTTCGCCGCCGAACGGCTGCACacc > 1:482945/1‑250 (MQ=255) aGCTCGCCATATTGCGTACATAACGCCTGCAATTCTGGACGATTTGCTGCCCATTCCCGCAGTGCATTTAGCGGCTGAGTCAATGCGGCTTTCAACTGCGCATCGACCGGATACTTTGCATCCTGCCGCGCGAGCGTCAC‑TGTCAGCGCACTTTCCGGGCGCTTCGCCAGCAGACGGTAGAGATGGAACGGACCGCCTGCTTTCGGCCCGGTCCCGGCCAACCCTTCGCCCCCGCACGGCTGCACacccac > 2:329670/1‑248 (MQ=255) gCTCGCCATATTGCGTACATAACGCCTGCAATTCTGGACGATTTGCTGCCCATTCCCGCAGGGTATTTAGCGGCTGAGTCAATGCGGCTTTCAACTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACTTCCCGGGCGATTCGACAGCAGACGGTAGAGAGAGAGCGGACCGCCTGCTTTCGGCCCGGTACCGGACAACCCTTCGCCGCCGAACGGCTGCACaccaacc < 2:188252/251‑1 (MQ=255) cGCCATATTGCGTACATAACGCCTGCAATTCGGGACGATTTGCTGCCCATTCCCGCAGTGCATTTAGCGGCTGAGTCAATGCGGCTTTCAACTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTAGAGATATAGCGGACCGCCTGCTTTCGGCCCGGTACCGGACAACCCTTCGCCGCCGAACGGCTGCACACCAACCAc < 1:42452/250‑1 (MQ=255) cATATTGCGTACATAACGCCTGCAATTCTGGACGATTTGCTGCCCATTCCCGCAGTGCATTTAGCGGCTGAGTCAATGCGGCTTTCAACTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGGTCCCGGACAACCCTTCGCCGCCGAACGGCTGCACaccaacccccgcc > 2:34066/1‑245 (MQ=255) tGCGTACATAACACCTGCACTTCTGGACGATTTGCTGCCCATTCCCGCAGTGCATTTAGCGGCTGAGTCAATGCGGCTTTCAACTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTAGAGTTAGAGCGGACCGCCTGCTTTCGGCCCGGTACCGGACAACCCTTCGCCGCCGAACGGCTGCACACCACCCCCTACGCccac > 2:225125/1‑251 (MQ=255) cGTACATCACGCCTGCAATTCTGGACGATTTGCTGCCCATTCCCGCAGTGCATTTAGCGGCTGAGTCAATGCGGCTTTCAACTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑AGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGGTACCGGACAACCCTTCGCCGCCGAACGGCTGCACACCAACCACTGCGCccacca < 1:157242/251‑1 (MQ=255) cGTACATACCGCCTGCAATTCTGGACGATTTGCTGCCCATTCCCGCAGTGAATTTAGCGGCTGAGTCAATGAGGCTTTCAACTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTCGAGATCGAGCGGACAGCCTGCTTTCGGCCCGGTACCGGACAACCCTTCACCGCCGCCCGGGTGCACACCACCCACTCCGCccacc > 2:465597/1‑250 (MQ=255) cGTACATAACGCCTGCAATTCTGGCCGATTTGCTGCCCATTCCCGCAGTGCATTTAGCGGCTGAGTCAATGCGGCTTTCAACTGCACATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGGTACCGGACAACCCCTAGCCGCCGAACGGCGGCACACCAACCACCGCCCccaccc > 2:252940/1‑250 (MQ=255) aCATAACGCCTGCAATTCTGGACGATTTGCTGCCCATTCCCGCAGTGCATTTAGCGGCTGAGTCAATGCGGCTTTCAACTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTa > 2:392287/1‑162 (MQ=255) aCATAACGCCTGCAATTCTGGACGATTTGCTGCCCATTCCCGCAGTGCATTTAGCGGCTGAGTCAATGCGGCTTTCAACTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTa < 1:392287/162‑1 (MQ=255) aaaccccggCAATTCTGGCCGATTGGCTGCCCATTCCCGCAGTGCATTTAGCGGCTGAGTCAATGCGGCTTTCATCTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCCC‑TGTCAGCGCATTTTCCGGGCAATTCGCCAGCAGACGGTAGAGATAGGGCGGACCGCCTGCTTTCGGCCCGGTACCGGACAACCCTTCGCCGCCGAACGGCTGCACACCAACCACTGCGCCCACCATATTAc < 2:132803/243‑1 (MQ=255) aaCGCCTGCAATTCTGGACGATTTGCTGCCCATTCCCGCAGTGCATTTAGCGGCTGAGTCAATGCGGCTTTCAACTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGGTACCGGACAACCCTTCGCCGCCGCACGGCTGCACACCAACCACTGCGCCCACCATATTACg > 1:171590/1‑251 (MQ=255) cccTGCAATTCTGGACGATTTGCTGCCCATTCCCGCATTGCATTTAGCGGCTGAGTCAATGCGGCTTTCAACGCCGCATCGACCGGATACTTTGCATCCTGACGCTCGAGCGTCAC‑TGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGGTACCGGACAACCCTTCGCCGCCGAACGGCTGCACACCAACCACTGCGCCCACCATATTACGGtt < 2:232494/250‑1 (MQ=255) ccTGCAATTCTGGTCGATTTGCTGCCCATTCCCGCAGTGCATTTAGCGGATGAGTCAATGTGGCTTTCCACTGCGCATCGACAGGATACTTTTCATCCTGACGCGCGAGCGTCAC‑TTTCAGAGCACTTTCCTGGCGATTCGCCAGCAGTCGGTAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGGGACCGGAACACCCTTCGCCGCAGAACGGCTGCACCCCAACCACTTCGCCCACCATATTACGGttt > 2:258832/1‑250 (MQ=255) aaaTTCTGGACGATTTGCTGCCCATTCCCGCAGTGCATTTAGGGGCTGAGTCAATGCGGCTTTCAACTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACGTTCCGGGCGATTCGCCAGCAGACGGTAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGGTACCGGACAACCCTTCGCCGCCGAACGGCTGCACACCAACCACTGCGCCCACCATATTACGGTTAACAt < 2:32728/250‑1 (MQ=255) cTGGACGATTTGCTGCCCATTCCCGCAGTGCATTTAGCGGCTGAGTCAATGCGGCTTTCAACTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGGTACCGGACAACCCTTCGCCGCCGAACGGCTGCACACCAACCACTGCGCTCACCATATTCCGGTTACCATACAgg > 2:118436/1‑251 (MQ=255) gACGATTTGCTGCCCATTCCCGCAGTGCATTTAGCGGCTGAGTCAATGCGGCTTTCAACTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGGTACCGGACAACCCTTCGCCGCCGAACGGCTGCACACCAACCACTGCGCCCACCATATTACGGTTAACATACAGGTTa < 1:326567/251‑1 (MQ=255) tgcCCATTCCCGCAGTGCATTTAGCGGCTGAGTCAATGCGGCTTTCAACTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGGTACCGGACAACCCTTCGCCGCCGAACGGCTGCACACCAACCACTGCGCCCACCATATTACGGTTAACATACAGGTTACCAACATggg > 1:11270/1‑251 (MQ=255) ccccATTCCCGCAGCTCATTGAGCTGCTGAGTCAATGCGGCTTTCAACTGCGCATCGGCCGGATTCTTTGCATCCGGACGCGCGAGCGTCAC‑TGTCAGCGCACTTGCCGGGCGATTCGCCCGCAGACGTGAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGGTACCGGACACCCCTTCGCCGCCTAACGGCTGCACACCAACCACGGCGCCCACCATATTACGGTTAACATACAGGTTACCAACATGGGc < 2:96760/250‑1 (MQ=255) cccATTCCCGCAGTGCATTTAGCGGCTGAGTCAATGCGGCTTTCAACTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGGTACCGGACAACCCTTCGCCGCCGAACGGCTGCACACCAACCACTGCGCCCACCATATTACGGTTAACATACAGGTTACCAACATGGGcc < 1:329977/251‑1 (MQ=255) ccATTCCCGCAGTGCATTTGGCGGCTGAGTCAATGCGGCTTTCACCTGTGCATCGACCGGATACTTTGCCTCCGGACGCGCGAGCGTCAC‑TGTCAGCGCTCTTTCCGGGCGATTCGCCAGCAGACGGTAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGGTACCGGACAACCCTTCGCCGCCGAACGGCTGCACACCAACCACTGCGGCCTCCATATTACGGTTAACATACAGGTTACCAACATGGGCCg < 2:143417/251‑1 (MQ=255) tCCCGCAGTGCATTTAGCGGCTGAGTCAATGCGGCTTTCAACTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGGTACCGGACAACCCTTCGCCGCCGAACGGCTGCACACCAACCACTGCGCCCACCATATTACGGTTAACATACAGGTTACCAACATGGGCCGAGc < 1:4907/250‑1 (MQ=255) ccccGCAGTGCATTTAGCGGCTGAGTCAATGCGGCTTTCAACTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGGTACCGGACAACCCTTCGCCGCCGAACGGCTGCACACCAACCACTGCGCCCACCATATTACGGTTAACATACAGGTTACCAACATGGGCCGAGcc < 1:363942/250‑1 (MQ=255) ccGCAGTGAATTTAGCGGCTGGGTCAATGCGGCTCTCAACGGCGCCACGACCGGATCCTTGGCAACCTGACGCGCGAGCGTCAC‑TGTCAGCGCTCTTTCCGGTCGATCCGCCGGCAGACGGTAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGGTACCGGACAACCCTTCGCCGCCGAACGGCTGCACACCAACCACTGCGCCCACCATATTACGGTTAACATACAGGTTACCAACATGGGCCGAGCCAg < 2:134744/251‑1 (MQ=255) gCAGTGCATTTAGCGTCTTAGTCAATGCGGCTTTCAACTGGGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGGTACCGGACAACCCTTCGCCGCCGAACGGCTGCACACCAACCACTGCGCCCACCATATTACGGTTAACATACAGGTTACCAACATGGGCCGAGCCAGTg < 1:310637/251‑1 (MQ=255) gTGCATTTAGCGGCTGAGTCAATGCGGCTTTCAACTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGGTACCGGACAACCCTTCGCCGCCGAACGGCTGCACACCAACCACTGCGCCCACCATATTACGGTTAACATACAGGTTACCAACAt > 1:78698/1‑234 (MQ=255) gTGCATTTAGCGGCTGAGTCAATGCGGCTTTCAACTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGGTACCGGACAACCCTTCGCCGCCGAACGGCTGCACACCAACCACTGCGCCCACCATATTACGGTTAACATACAGGTTACCAACAt < 2:78698/234‑1 (MQ=255) cATTTAGCGGCTGAGTCAATGCGGCTTTCAACTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGGTACCGGACAACCCTTCGCCGCCGAACGGCTGCACACCAACCACTGCGCCCACCATATTACGGTTAACATACAGGTTACCAACATGGGCCGAGCCAGTGACCTgg < 1:352955/251‑1 (MQ=255) cATTTAGCGGCCGTGTCAATCCGGCTTTCAAATACGAATCGACCGGATATTTTCCCTACTGCCGCGCGAGCATCAC‑TGTCCGCGCGCTTTCCGGGCGATTCGCCAGCAGCCGGTAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGGTCACGGACAACACTTCTCCGCCGAACCGCTGCAAACCAACCACGGCGCCCACCCTATTACGGATAACATACAGGTTACCAACCTggcctgcgccaaagacacgg > 2:475815/1‑233 (MQ=255) ggCTGAGTCAATGCGGCTTTCAACTGCGCATCTACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGTGAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGGTACCGGACAACCCTTCGCCGCCGAACGGCTGCACCCCAACCACTGCGCCCCCCATATTACGGTTAACATACAGGTTACCAACATGGGCCGAGCCAGTGACCTGGGCGATGGt < 1:62143/251‑1 (MQ=255) tGAGTCAATGCGGCTTTCAACTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGGTACCGGACAACCCTTCGCCGCCGAACGGCTGCACACCAACCACTGCGCCCACCATATTACGGTTAACATACAGGTTACCAACATGGGCCGAGCCAGTGACCTGGGCGATGGTTtc > 1:65436/1‑251 (MQ=255) tCAATGCGGCTTTCAACTGCGCATCGAACGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGGTACCGGACAACCCTTCGCCGCCGAACGGCTGCACACCAACCCCTGCGCCCACCATATTACGGTTAACATACAGGTTACCAACATGGGCCGAGCCAGTGACCTGGGCGCTGGTTtcatc > 1:145293/1‑250 (MQ=255) cgtatcTTTCAACTGCGCATCGACCGGAGTCTTTGCATCCGGACGCGCGAGCGTCAC‑GGTCAGCGCACTGTCCGGGCGATGCGCCAGCAGACGGTAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGGTACCGGACAACCCTTCGCCGCCGAACGGCTGCACACCAACCACTGCGCCCACCATATTACGGTTAACATACAGGTTACCAACATGGGCCGAGCCAGTGACCTGGGCGATGGTTTCATCAAt < 2:434001/244‑1 (MQ=255) gCGGCTTTCAACTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGGTACCGGACAACCCTTCGCCGCCGAACGGCTGCACACCAACCACTGCGCCCACCATATTACGGTTAACATACAGGTTACCAACATGGGCCGAGCCAGTGACCTGGGCGATGGTTTCATCAATgcg > 1:165328/1‑251 (MQ=255) cGGCTTTCAACTGCGCATCGACCGGCTACTTTGCATCGTGACGCGCTAGCGTCAC‑TTTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACAGAAGAGCTAGAGCGGACCGCCTGCTTTCGGCCCGGTACCGGACAACCCTTCGCCGCCGAACGGCTGAACAACAACGACTTCGCCCACCATATTACGGTTAACATACAGGTTACCGACATTGGCCGAACCACAGACCAGGGCGCAGGCTTCATCATTgcgc > 1:321041/1‑251 (MQ=255) ttCAACTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGGTACCGGACAACCCTTCGCCGCCGAACGGCTGCACACCAACCACTGCGCCCACCATATTACGGTTAACATACAGGTTACCAACATGGGCCGAGCCAGTGACCTGGGCGATGGTTTCATCAAt > 1:434001/1‑242 (MQ=255) aaCTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGGTACCGGACAACCCTTCGCCGCCGAACGGCTGCACACCAACCACTGCGCCCACCATATTACGGTTAACATACAGGTTACCAACATGGGCCGAGCCAGTGACCTGGGCGATGGTTTCATCAATGCGCGTATGGAc > 1:174666/1‑251 (MQ=255) aaCTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGGTACCGGACAACCCTTCGCCGCCGAACGGCTGCACACCAACCACTGCGCCCACCATATTACGGTTAACATACAGGTTACCAACATGGGCCGAGCCAGTGACCTGGGCGATGGTTTCATCAATGCGCGTATGGAc < 1:154981/251‑1 (MQ=255) gcGACCGGATCCTTTGCTCCCTGACGCGCTAGCGACCC‑TGTCAGCCCACTTTCCGGGCGATTCGCCAGCAGACGGTAGAGATAGGGAGGACCGCCTGCTTTCGGCCCGGTACCGGACAACCCTTCGCCGCCGACCGGCTGCACACCAACCACTGCGCCCACCATATTACGGTTAACATACAGGTTACCAACATGGGCCGAGCCAGTGACCTGGGCGATGGTTTCATCAATGCGCGTATGGACGCCAAGCg < 2:264989/249‑1 (MQ=255) acGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGGTACCGGACAACCCTTCGCCGCCGAACGGCTGCACACCAACCACTGCGCCCACCATATTACGGTTAACATACAGGTTACCAACATGGGCCGAGCCAGTGACCTGGGCGATGGTTTCATCAATGCGCGTATGGACGCCAAGCGt < 1:234025/250‑1 (MQ=255) cGACCGGATACTTTGCACCCTGACGCGCGAGCGTCAC‑TGCCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGGTACCGGACAACCCTACGCCGCCGAACGGCTGCACACCAACCACTGCGCTCACCATATTACGGTTAACATACAGGTTACCAACATGGGCCGAGCCAGTGACCTGGGCGATGGGTTCATCAATGCGCGTATGGACGCCAAGCGt < 1:118436/250‑1 (MQ=255) cccGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGGTACCGGACAACCCTTCGCCGCCGAACGGCTGCACACCAACCACTGCGCCCACCATATTACGGTTAACATACAGGTTACCAACATGGGCCGAGCCAGTGACCTGGGCGATGGTTTCATCAATGCGCGTATGGACGCCAAGCGTCAg < 1:241952/250‑1 (MQ=255) aCTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGGTACCGGACAACCCTTCGCCGCCGAACGGCTGCACACCAACCACTGCGCCCACCATATTACGGTTAACATACAGGTTACCAACATGGGCCGAGCCAGTGACCTGGGCGATGGTTTCATCAATGCGCGTATGGACGCCAAGCGTCAGACCATa > 1:34866/1‑250 (MQ=255) cTTTGCATCCTGACGCGCGAGCGTCAC‑TGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGGTACCGGACAACCCTTCGCCGCCGAACGGCTGCACACCAACCACTGCGCCCACCATATTACGGTTAACATACAGGTTACCAACATGGGCCGAGCCAGTGACCTGGGCGATGGTTTCATCAATGCGCGTATGGACGCCAAGCGTCAGACCATAAc > 1:101843/1‑251 (MQ=255) taaCGCGCGAGCGTCAC‑AGCCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGGTACCGGACAACACTTCGCCGCCGAACGGCTGCACACCAACCACTGCGCCCACCATATTACGGTTAACATACAGGTTACCAACATGGGCCGAGCCAGTGACCTGGGCGATGGTTTCATCAATGCGCGTATGGACGCCCCGCGTCAGACCATAACCGGAAGcctt > 2:24752/3‑248 (MQ=255) cgcgggAGCGTCACGTGC‑AGCGCACGTTCCGGGCGTTTTGCCAGCAGACGGGAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGGTACCGGACAACCCTTCGCCGCCGAACGGCTGCACCCCAACCACTGCGCCCACCATATTACGGTTAACATACAGGTTACCAACATGGGCCGAGCCAGTGACCTGGGCGATGGTTTCATCAATGCGCGTATGGACGCCAAGCGTCAGACCATAACCGGAAGCGTTAAt < 2:319001/251‑1 (MQ=255) cgcgcgAGCGTCAC‑TGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGGTACCGGACAACCCTTCGCCGCCGAACGGCTGCACACCAACCACTGCGCCCACCATATTACGGTTAACATACAGGTTACCAACATGGGCCGAGCCAGTGACCTGGGCGATGGTTTCATCAATGCGCGTATGGACGCCAAGCGTCAGACCATAACCGGAAGCGTTAAt > 1:276210/1‑251 (MQ=255) gAGCGTCAC‑TGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGGTACCGGACAACCCTTCGCCGCCGAACGGCTGCACACCAACCACTGCGCCCACCATATTACGGTTAACATACAGGTTACCAACATGGGCCGAGCCAGTGACCTGGGCGATGGTTTCATCAATGCGCGTATGGACGCCAAGCGTCAGACCATAACCGGAAGCGTTAATCTGcc > 2:245125/1‑250 (MQ=255) cGTCAC‑TGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGGTACCGGACAACCCTTCGCCGCCGAACGGCTGCACACCAACCACTGCGCCCACCATATTACGGTTAACATACAGGTTACCAACATGGGCCGAGCCAGTGACCTGGGCGATGGTTTCATCAATGCGCGTATGGACGCCAAGCGTCAGACCATAACCGGAAGCGTTAATCTGCTCg > 1:327947/1‑250 (MQ=255) gTCAC‑TGTCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGGTACCGGACAACCCTTCGCCGCCGAACGGCTGCACACCAACCACTGCGCCCACCATATTACGGTTAACATACAGGTTACCAACATGGGCCGAGCCAGTGACCTGGGCGATGGTTTCATCAATGCGCGTATGGACGCCAAGCGTCAGACCATAACCGGAAGCGTTAATCTGCTCGAt > 1:347380/1‑251 (MQ=255) | GCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGTTCACCCGTCGGCCCCGGCAGCAATCGTTGTGTTCCTGCCTGCGCCAGCTCGCCATATTGCGTACATAACGCCTGCAATTCTGGACGATTTGCTGCCCATTCCCGCAGTGCATTTAGCGGCTGAGTCAATGCGGCTTTCAACTGCGCATCGACCGGATACTTTGCATCCTGACGCGCGAGCGTCAC‑TGCCAGCGCACTTTCCGGGCGATTCGCCAGCAGACGGTAGAGATAGAGCGGACCGCCTGCTTTCGGCCCGGTACCGGACAACCCTTCGCCGCCGAACGGCTGCACACCAACCACTGCGCCCACCATATTACGGTTAACATACAGGTTACCAACATGGGCCGAGCCAGTGACCTGGGCGATGGTTTCATCAATGCGCGTATGGACGCCAAGCGTCAGACCATAACCGGAAGCGTTAATCTGCTCGAT > NC_000913/1075282‑1075771 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |