| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 66,635 | C→T | intergenic (‑85/+200) | araD ← / ← araA | L‑ribulose‑5‑phosphate 4‑epimerase AraD/L‑arabinose isomerase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 66,635 | 0 | C | T | 96.8% | 177.4 / ‑4.4 | 62 | intergenic (‑85/+200) | araD/araA | L‑ribulose‑5‑phosphate 4‑epimerase AraD/L‑arabinose isomerase |
| Reads supporting (aligned to +/- strand): ref base C (1/1); new base T (39/21); total (40/22) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01 | |||||||||||
GTCAGCGGTCATGACGCTGTAATCGACGCCGGAAGGTTTGATCACAAAGACGCCGCGCTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGC‑CTACAAAATCGCA‑GCGTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCAGGCGTTACATACCGGATGCGGCTACTTAGCGACGAAACCCGTAATACACTTCGTTCCAGCGCAGCGCGT > NC_000913/66389‑66878 | gTCAGCGGTCATGACGCTGTAATCGACGCCGGAAGGTTTGATCACAAAGACGCCGCGCTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGC‑CTACAAAATCGCA‑GCGTGTAGGCCTGATAAGACGCGCCAGCGTCGTATCa < 1:117712/251‑1 (MQ=255) cAGCGGTCATGACGCTGTAATCGACGCCGGAAGGTTTGACCACAAAGACGCCGCGCTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCTTGACCATGTTGTGTTTTTGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTTAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGC‑CTACAAAATCGCA‑GCGTGTAGGCCTGATAAGACGCGCCAGCGTCGTATCAgg < 2:254985/251‑1 (MQ=255) ggTCATGACGCTGTAATCGACGCCGGAAGGTTTGATCACAAAGACGCCGCGCTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGAGGCGCTTTGCTTATCCGGC‑CTACAAAATCGCA‑GCGTGTAGGCCTGATAAGACGCGCCAGCGCCGTATCAGGCGtt > 2:286598/1‑251 (MQ=255) gTCATGACGCTGTAATCGACGCCGGAAGGTTTGATCACAAAGACGCCGCGCTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCAGC‑CTACAAAATCGCA‑GCGTGTAGGCCTGTTAAGAGGCGCCATCCTCGTATCAGGCGTTg > 2:299659/1‑251 (MQ=255) cATGACGCTGTAATCGACGCCGGAAGGTTTGATCACAAAGACGCCGCGCTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGC‑CTACAAAATCGCA‑GCGTGTAGGCCTGATAAGACGCGCCAGCGTCGTATCAGGCGTTGa > 1:186665/1‑250 (MQ=255) aagcGACGCCGGAAGGTTTGACCACAAAGACGCCGCGCTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTGTGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCGTCTTGCCGGATGCGCTTTGCTTATCCGGC‑CTACAAAATCGCA‑GCGTGTAGGCCTGATAAGACGCGCCAGCGTCGTATCAGGCGTTGAATGCCGGATgcg < 2:230660/248‑1 (MQ=255) gcGACGCCGGAAGGGTTGATCACAAAGACGCCGCGCTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGC‑CTACAAAATCGCA‑GCGTGTAGGCCTGATAAGACGCGCCAGCGTCGTATCAGGCGTTGAATGCCGGATGCGCt < 2:148259/250‑1 (MQ=255) cGACGCCGGAAGGTTGGATCACAAAGACGCCGCGCTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGC‑CTACAAAATCGCA‑GCGTGTAGGCGTGATAAGACGCGCCAGCGTAGCATCAGGCGTTGAATGCCGGATGCGCtt < 2:54997/251‑1 (MQ=255) gCCGGCAGGTTTTATCACAAAGTCGCCGCGCTCGCGATCAACGGCGCTGACGTGGCCCCATGTGAGCGTTACCAGGTTGTTTTTTGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGC‑CTACAAAATCGCA‑GCGTGTAGGCCTGATAAGACGCGCCAGCGTCGTATCAGGCGTTGAATGCCGGATGCGCTTTGCt < 2:244064/251‑1 (MQ=37) cGGAAGGTTTGATCACAAAGACGCCGCGCTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGC‑CTACAAAATCGCA‑GCGTGTAGGCCTGATAAGACGCGCCAGCGTCGTATCAGGCGTTGAATGCCGGATGCGCTTTGCtt > 1:88462/1‑250 (MQ=255) aaGGTTTGATCACAAAGACGCCGCGCTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGC‑CTACAAAATCGCA‑GCGTGTAGGCCTGATAAGACGCGCCAGCGTCGTATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATcc < 1:329919/251‑1 (MQ=255) caAAGACGCCGCGCTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCTGC‑CTACAAAATCGCA‑GCGTGTAGGCCTGATAAGACGCGCCAGCGTCGTATCAGGCGTTGAATGCCGGATTCGCTTTGCTTATCCGTCCTACAAAAt > 2:357129/1‑251 (MQ=255) aaaGACGCCGCGCTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGC‑CTACAAAATCGCA‑GCGTGTAGGCCTGATAAGACGCGCCAGCGTCGTATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCCACAAAATc > 2:258731/1‑251 (MQ=255) gccgcgttccggtgcAACGGCGCTGGCTTTGCCCCATGTGAGCGTGACCAGTTTGGGTTTGTGCAGCGCCAGGTTGGCTTCTAATACCTTGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGTAGGCGCTTTGCTTATCCGGC‑CTATAAATTCGCA‑GCGTGTAGGCCTGATAAGACGCGCCAGCGTCGTATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGTCCTACAAAATCGCAgcg < 2:80549/237‑1 (MQ=21) gcgcTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGC‑CTACAAAATCGCA‑GCGTGTAGGCCTGATAAGACGCGCCAGCGTCGTATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGt > 1:297435/1‑251 (MQ=255) gcTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGC‑CTACAAAATCGCA‑GCGTGTAGGCCTGATAAGACGCGCCAGCGTCGTATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGt > 2:470369/1‑249 (MQ=255) cgcgATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGC‑CTACAAAATCGCA‑GCGTGTAGGCCTGATAAGACGCGCCAGCGTCGTATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGcc > 2:471454/1‑251 (MQ=255) gATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGC‑CTACAAAATCGCA‑GCGTGTAGGCCTGATAAGACGCGCCAGCGTCGTATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTg > 1:326144/1‑250 (MQ=255) aTCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGC‑CTACAAAATCGCA‑GCGTGTAGGCCTGATAAGACGCGCCAGCGTCGTATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTggt > 2:28067/1‑249 (MQ=255) aaCGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGC‑CTACAAAATCGCA‑GCGTGTAGGCCTGATAAGACGCGCCAGCGTCGTATCAGGCGTTGAATGCCGGa > 2:97052/1‑201 (MQ=255) aaCGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGC‑CTACAAAATCGCA‑GCGTGTAGGCCTGATAAGACGCGCCAGCGTCGTATCAGGCGTTGAATGCCGGa < 1:97052/201‑1 (MQ=255) tGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGC‑CTACAAAATCGCA‑GCGTGTAGGCCTGATAAGACGCGCAAGCGTCGTATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGACTGATAAGACGCGCCAGCGTCg > 1:415908/1‑251 (MQ=255) gCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGC‑CTACAAAATCGCA‑GCGTGTAGGCCTGATAAGACGCGCCAGCGTCGTATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGgcgc > 2:294545/1‑251 (MQ=255) cATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGC‑CTACAAAATCGCA‑GCGTGTAGGCCTGATAAGACGCGCCAGCGTCGTATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATc > 1:415926/1‑250 (MQ=255) tgAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGC‑CTACAAAATCGCA‑GCGTGTAGGCCTGATAAGACGCGCCAGCGTCGTATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCg > 1:72231/1‑251 (MQ=255) tgAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACATGACGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGC‑CTACAAAATCGCA‑GCGTGTAGGCCTGATCAGACGCGCCAGCGTCGTATCAGGCGTTGAATGCCGCCTGCGCTTTCCTTATCCGGCCTACCAACTCGCATCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCACCAGGCg > 2:266439/1‑251 (MQ=21) tGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGC‑CTACAAAATCGCA‑GCGTGTAGGCCTGATAAGACGCGCCAGCGTCGTATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAAt > 2:475547/1‑251 (MQ=255) gACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGC‑CTACAAAATCGCA‑GCGTGTAGGCCTGATAAGACGCGCCAGCGTCGTATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAAt < 1:28067/250‑1 (MQ=255) aGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGC‑CTACAAAATCGCA‑GCGTGTAGGCCTGATAAGACGCGCCAGCGTCGTATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGCATGCCgg > 1:351260/1‑251 (MQ=255) gttgtgttgtGTCGGCGCCAGGGTGCCTTCTTATACCTGGCTGTAGATATCTGCTAACATGTTGGCTCCTGCGGGGCGGATGCGCGTTGCTTTTCCGGCGCT‑CAAAATCGGATGC‑TGAAGGCCTGATAAGACGTGCCTGCGGCGTATCAGCCCTTGCATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGAt < 2:219167/251‑1 (MQ=9) ttGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGC‑CTACAAAATCGCA‑GCGTGTAGGCCTGATAAGACGCGCCAGCGTCGTATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATg > 1:359158/1‑251 (MQ=255) tttGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTAAGATCTTCTAACGTGTTATCTCCTTCGTGCCGGTTGCGCTTTGCTTATCCGCA‑CTACAAAATCGAA‑GCGTGTAGACCTGATACGACACGCCAGCGTCGCATCAGGCGATAGATGCCGGATGCCCTTTGCTTCTCCGGCCTGCAAAATCGCCGCCCGTAGCCCTATTAGGACGACCCAGCTTCGCATAAGGCGTTGCGTGCCGCGTGCGCttt > 1:441273/1‑251 (MQ=255) ccAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGC‑CTACAAAATCGCA‑GCGTGTAGGCCTGATAAGACGCGCCAGCGTCGTATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGAGGCGCTTTGATTATCCgg > 1:458199/1‑251 (MQ=255) aGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGC‑CTACAAAATCGCA‑GCGTGTAGGCCTGATAAGACGCGCCAGCGTCGTATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGcc < 1:475547/251‑1 (MQ=255) tGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGC‑CTACAAAATCGCA‑GCGTGTAGGCCTGATAAGATGCGCCAGCGTCGTATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTAc > 1:424685/1‑250 (MQ=255) ggCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGC‑CTACAAAATCGCA‑GCGTGTAGGCCTGATAAGACGCGCCAGCGTCGTATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTaaa > 1:312770/1‑248 (MQ=255) aaTACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGC‑CTACAAAATCGCA‑GCGTGTAGGCCTGATAAGCCGCGCCAGCGTCGTATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGCCCTACAAAATCGCAGCGCGGTGGCCAGATACGACGCGCCAGCGTCGCACCAGTAGTTGAAGGCCGGATTCCCTTTGCTTGTCCGGACTAccaacactcc > 2:147830/1‑242 (MQ=18) cGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGC‑CTACAAAATCGCA‑GCGTGTAGGCCTGATAAGACGCGCCAGCGTCGTATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAgg < 1:470369/251‑1 (MQ=255) tttGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGC‑CTACAAAATCGCA‑GCGTGTAGGCCTGATAAGACGCGCCAGCGTCGTATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATa > 1:150228/1‑171 (MQ=255) tttGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGC‑CTACAAAATCGCA‑GCGTGTAGGCCTGATAAGACGCGCCAGCGTCGTATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATa < 2:150228/171‑1 (MQ=255) tttGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGC‑CTACAAAATCGCA‑GCGTGTAGGCCTGATAAGACGCGCCAGCGTCGTATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGcc > 1:247584/1‑251 (MQ=255) ttGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGA‑CTACAAAATCGCA‑GCGTGTAGGCCTGATAAGACGCGCCAGCGTCGTATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGcc > 1:478197/1‑250 (MQ=255) cttctAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGC‑CTACAAAATCGCA‑GCGTGTAGGCCTGATAAGACGCGCCAGCGTCGTATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCAGATa > 1:279803/1‑248 (MQ=255) ttctAACATGTAGACTCCTTCGTGCCGGATGAGCTTTACTTATCCGAC‑CTACAAAATCGCA‑GCGAGTAGGCCTGATAAGACGCGCCAGCGTCGTATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGACCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCAGATAAGAc > 1:137357/1‑251 (MQ=21) aaCATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGC‑CTACAAAATCGCA‑GCGTGTAGGCCTGATAAGACGCGCCAGCATCGTATCAGGCGTTGCATGCAGGATGCGCTTTGCTTACCCGGCCTACAAAATCGCAGCGCGTAGGACTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCAGATAAGACGCGt > 1:199723/1‑251 (MQ=255) cATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGC‑CTACAAAATCGCA‑GCGTGTAGGCCTGATAAGACGCGCCAGCGTCGTATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCAGATAAGACGCGTc > 1:93901/1‑250 (MQ=255) gTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGC‑CTACAAAATCGCA‑GCGTGTAGGCCTGATAAGACGCGCCAGCGTCGTATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCa > 1:446148/1‑234 (MQ=255) gTTGACGCCTGCGGGCCGGAGGCGCTGTTCGTACCCGGC‑CTACAAAATCGCA‑GCGTTTAGGCCTGATAAGACGCGCCAGCGTCGTATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGGTGAAGGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCa < 2:446148/234‑1 (MQ=18) gACTCCGTCGTGCCGGATGCGCTTTGCTTATCCGGC‑CTACAAAATCGCA‑GCGTGTAGGCCTGATAAGACGCGCCAGCGTCGTATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCAGATAAGACGCGTCAGCGTCg < 1:294545/251‑1 (MQ=255) ccccTTCGTGCCGGATGCGCTTTGCTTATCCGGC‑CTACAAAATCGCA‑GCGTGTAGGCCGGATAAGGCGCGCCAGCGTCGTATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCAGATAAGACGCGTCAGCGTCGCa < 2:359158/249‑1 (MQ=255) ccgtCGTGCCGGATGCGCTTGTCTCTTCCGGC‑CCACAAAACCGTA‑GCGTGTAGGCCGGATAAGACGCGCCAGCGTCGTATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCAGATAAGACGCGTCAGCGTCGCAt < 2:93901/247‑1 (MQ=18) ccTTCGTGCCGGATGCGCTTTGCTTATCCGGC‑CTACAAAATCGCA‑GCGTGTAGGCCTGATAAGACGCGCCAGCGTCGTATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCAGATAAGACGCGTCAGCGTCGCAt < 1:473699/250‑1 (MQ=255) ccTTCGTGCCGGATGCGCTTTGCTTATCCGGC‑CTACAAAATCGCA‑GCGTGTAGGCCTGATAAGACGCGCCAGCGTCGTATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCAGATAAGACGCGTCAGCGTCGCATc < 1:225790/251‑1 (MQ=255) cgcTTTGCTTATCCGGC‑CTACAAAATCGCA‑GCGTGTAGGCCTGATAAGACGCGCCAGCGTCGTATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCCTTGCTTATCCCGCCTACAAAATCGCCGCGTGTCGGCCAGATAAGGCGCGTCacatgcgcctcaggcgttgaataccg > 2:169634/1‑226 (MQ=18) cTTATCCGGC‑CTACAAAATCGCA‑GCGTGTAGGCCTGATAAGACGCGCCAGCGTCGTATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCAGATAAGCCGCGTCACCGGCGCATCAGGCGTTACATCCCGGATGCgg > 2:257927/1‑251 (MQ=255) cAAAATCGCA‑GCGTGTAGGCCTGATAAGACGCGCCAGCGTCGTATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGAGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAACTCGCAGCGTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCAGGCGTTACATACCGGATGCGGCTACTTCGcgacg > 1:218623/1‑251 (MQ=255) aTCGCA‑GCGTGTAGGCCTGATAATACGCGCCAGCGTCGTATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCAGGCGTTACATACCGGATGCGGCTACTTAGCGACGAAAc < 2:72231/251‑1 (MQ=255) cgtgggttgggctggatcaGACGCGCCAGCGTCTTATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCAGGCGTTACATACCGGATGCGGCTACTTAGCGACGAAACCCGt < 2:186436/233‑1 (MQ=18) ggCCTGATAAGACGCGCCAGCGTCGTATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCAGCTAAGACGCGTCAGCGTCGCATCAGGCGTTACATACCGGATGCGGCTACTTAGCGCCGAACCCCGTAATACACtt > 1:458031/1‑251 (MQ=255) aaGACGCGCCAGCGTCGTATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCAGGCGTTACATACCGGATGCGGCTACTTAGCGACGAAACCCGTAATACACTTCGTTcc > 1:294582/1‑249 (MQ=255) cgcCAGCGTCGTATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGCATGCCGGATGCGCTTTGCTTATCCGGCCTACCAAAACGCAGCGTGTAGGCCAGAAAAGCCGCGTCAGCGTCGCCTCAGGCGTTACATACCGGATGCGGCTCCTTATCAACGCAACCCGTAATACCGTTCGTTCcaccgcagg > 2:291629/1‑250 (MQ=18) aGCGTCGTATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCAGGCGTTACATACCGGATGCGGCTACTTAGCGACGAAACCCGTAATACACTTCGATCCAGCGCAGcgcgg > 1:11203/1‑250 (MQ=255) | GTCAGCGGTCATGACGCTGTAATCGACGCCGGAAGGTTTGATCACAAAGACGCCGCGCTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGC‑CTACAAAATCGCA‑GCGTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCAGGCGTTACATACCGGATGCGGCTACTTAGCGACGAAACCCGTAATACACTTCGTTCCAGCGCAGCGCGT > NC_000913/66389‑66878 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |