New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3584195	NA (NA)	42 (0.910)	39/478	0.2	95.5%	noncoding (768/768 nt)	IS1	repeat region
	?	NC_000913	4250983 =	2 (0.040)					intergenic (+509/‑1523)	malM/ubiC	maltose regulon periplasmic protein/chorismate lyase

TAACTCTTTGATGAAACATGATGTGGTGCAAGGAAATAATATAGTAGATCTTGATTTACTACGTAATTTAAATGGGGTGCCAGGTTTAAACAGAGATAACTTTATTTATATCAGCAATATTTTTTCAAATATAAAACAACGGAACGAAAAAATCATGCAATAAATATGTTTCGTGAAGTCTCAATCAGTAATGATACTATAAGTGTAAAATTCTACAGAAATGAAAAAAATTGAATGCGCTTGCAATTTTCTGATGGATAAAGATGCGCAGGGGTATATCGACCTGTCTGATTTGGATTTAACAAGTTGTCATTTTAAAGGTGACGTTATATCGAAGGTGTCTTTTTTATCATCAAATCTACAACATGTAACATTCGAATGTAAAGAAATTGGGGATTGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGA  >  NC_000913/4250735‑4251195                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                     caccctttgacgtggtgatatggatgaaggatggctggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcatcacctgaatctgaggcagcacctggcacggctgggacggaagacgctgtcgttctcaaaatcggtggtgctgcatgaaataggcatcgggcattatttgaacataaaacactatcaataagttggagtcatttccttt                                                                                                                                                                                                                    >  2:23507‑M2/249‑250 (MQ=255)   ccattggacgtggtgatagggatgagggatggctggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTTCTg                                                                                                                                                                                                                  <  2:224011‑M2/5‑1 (MQ=255)           cgtggtgatatggatgacggatggctggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTTCTGATGGATaa                                                                                                                                                                                                          <  1:29869‑M2/13‑1 (MQ=255)                        atgacggatggctgggcgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTTCTGATGGATAAAGATGCGCAgggg                                                                                                                                                                                             <  2:429909‑M2/26‑1 (MQ=255)                          gacggatggctggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTTCTGATGGATAAAGATGCGCAGGGGt                                                                                                                                                                                            <  1:93980‑M2/27‑1 (MQ=255)                            cggatggctggccgtcgtatgactcccgcctgaagggaaagctgcacttaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgagccagcacctggcacggctgggacggaagtcgctgtcggtctcaaaatcggtgtagctgcatgacaaagtcatcgggcagtatctgaacataaaacactagcaataagttggagtcattgccTTCCGATGGATACAGATGCGCAGGTGtata                                                                                                                                                                                         <  2:208342‑M2/30‑1 (MQ=255)                             ggatggctggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTTCTGATGGATAAAGATGCGCAGGGGTatat                                                                                                                                                                                        >  2:41422‑M2/221‑251 (MQ=255)                             ggatggctggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTTCTGATGGATAAAGATGCGCAGGGGTatat                                                                                                                                                                                        >  2:104507‑M2/221‑251 (MQ=255)                               atggctggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTTCTGATGGATAAAGATGCGCAGGGGTATATCg                                                                                                                                                                                      <  1:104507‑M2/33‑1 (MQ=255)                                 ggctggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacgtaagtcgctgtcgttctcaaaatcggtggagcggcatgacaaagtcatcgggcattatcttaacataaaacactatcaataagttggagtcattaccTTCTGATGGATAAAGATGCGCAGGGGTATATCGAc                                                                                                                                                                                    <  1:61498‑M2/35‑1 (MQ=255)                                  gctggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagtggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTTCTGATGGATAAAGATGCGCAGGGGTATATCGAcc                                                                                                                                                                                   <  2:485387‑M2/36‑1 (MQ=255)                                        cgctggatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatattcgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTTCTGATGGATAAAGATGCGCAGGGGTATATCGACCTGTCTg                                                                                                                                                                             <  1:45358‑M2/42‑1 (MQ=255)                                            gtatgaaacccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaaggcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTTCTGATGGATAAAGATGCGCAGGGGTATATCGACCTGTCTGAtt                                                                                                                                                                          <  1:469841‑M2/45‑1 (MQ=255)                                                 aatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTTCTGATGGATAAAGATGCGCAGGGGTATATCGACCTGTCTGATTTGGAtt                                                                                                                                                                    >  2:247905‑M2/201‑251 (MQ=255)                                                   tcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTTCTGATGGATAAAGATGCGCAGGGGTATATCGACCTGTCTGATTTGGAttt                                                                                                                                                                   >  1:399926‑M2/199‑250 (MQ=255)                                                       gcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTTCTGATGGATAAAGATGCGCAGGGGTATATCGACCTGTCTGATTTGGATTTAACaa                                                                                                                                                              <  1:321064‑M2/57‑1 (MQ=255)                                                                              atcagcaagcgatatacgcagcgaattgggcggcataaccggaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTTCTGATGGATAAAGATGCGCAGGGGTATAGCGACCTGTCTTATTTGGATTTAACAAGGTGTCATTTTAAAGGTGACGtt                                                                                                                                       <  2:450467‑M2/80‑1 (MQ=255)                                                                                              cgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTTCTGATGGATAAAGATGCGCAGGGGTATATCGACCTGTCTGATTTGGATTTAACAAGTTGTCA‑TTTAAAGGTGACGTTATATCGAAGGTGTCttt                                                                                                                      <  1:46961‑M2/96‑1 (MQ=255)                                                                                                cagcgaattgagcggcataacctgaatctgaggcagctccttgcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcattacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTTTTGATGGATAAAGATGCGCAGGGGTATATCGACCTGTCTGATTTGGTTTTATCAAGTTGGCATTTTAAAGGTGACGTTATATCGAAGGTGTCtttt                                                                                                                     <  2:475469‑M2/98‑1 (MQ=255)                                                                                                     tttatttaTATCAGCAATATTTTTTCAAATATAAAACAACGGAACGAAAAAATCATGCAATAAATATGTTTCGTGAAGTCTCAATCAGTAATGATACTATAAGTGTAAAATTCTACAGAAATGAAAAAAATTGAATGCGCTTGCAATTTTCTGATGGATAAAGATGCGCAGGGGTATATCGACCTGTCTGATTTGGATTTAACAAGTTGTCATTTTAAAGGTGACGTTATATCGAAgg                                                                                                                             <  1:182756/238‑1 (MQ=255)                                                                                                     tttatttaTATCAGCAATATTTTTTCAAATATAAAACAACGGAACGAAAAAATCATGCAATAAATATGTTTCGTGAAGTCTCAATCAGTAATGATACTATAAGTGTAAAATTCTACAGAAATGAAAAAAATTGAATGCGCTTGCAATTTTCTGATGGATAAAGATGCGCAGGGGTATATCGACCTGTCTGATTTGGATTTAACAAGTTGTCATTTTAAAGGTGACGTTATATCGAAgg                                                                                                                             >  2:182756/1‑238 (MQ=255)                                                                                                                  aacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTTCTGATGGATAAAGATGCGTAGGGGTATATCGACCTGTCTGATTTGGATTTAACAAGTTGTCATTTTAAAGGTGACGTTATATAGAAGGTGTCTTTTTTATCATCAAATCTaca                                                                                                    >  1:28298‑M2/136‑250 (MQ=255)                                                                                                                    ccggaatctgagtcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTTCTGATGGATAAAGATGCGCAGGGGTATATCGACCTGTCTGATTTGGATTTAACAAGTTGTCATTTTAAAGGTGACGTTATATCGAAGGTGTCTTTTTTATCATCAAATCTccaaca                                                                                                 <  1:190514‑M2/118‑1 (MQ=255)                                                                                                                       gaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTTCTGATGGATAAAGATGCGCAGGGGTATATCGACCTGTCTGATTTGGATTTAACAAGTTGTCATTTTAAAGGTGACGTTATATCGAAGGTGTCTTTTTTATCATCAAATCTACAACATGt                                                                                              >  1:410856‑M2/131‑251 (MQ=255)                                                                                                                        aatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTTCTGCTGGATAAAGATGCGCAGGGGTATATCGAc                                                                                                                                                                                    >  1:320274‑M2/130‑164 (MQ=255)                                                                                                                        aatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTTCTGATGGATAAAGATGCGCAGGGGTATATCGAc                                                                                                                                                                                    <  2:320274‑M2/35‑1 (MQ=255)                                                                                                                        aagcggaggcagcacctggcatggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTTCTGATGGATAAAGATGCGCAGGGGTATATCGACCTGTCTGATTTGGATTTAACAAGTTGTCATTTTAAAGGTGACGTTATATCGAAGGTGTCTTTTTTATCATCAAATCTACAACATGTa                                                                                             <  2:355737‑M2/122‑1 (MQ=255)                                                                                                                                                  gggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTTCTGATGGATAAAGATGCGCAGGGGTATATCGACCTGTCTGATTTGGATTTAACAAGTTGTCATTTTAAAGGTGACGTTATATCGAAGGTGTCTTTTTTATCATCAAATCTACAACATGTAACATTCGAATGTAAAGAAATTGGGGa                                                                   <  2:353969‑M2/148‑1 (MQ=255)                                                                                                                                                     acggaagtcgctgtcgttctcaatatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaagaagttggagtcattaccTTCTGATGGATAAAGATGCGCAGGGGTATATCGACCTGTCTGATTTGGATTTAACAAGTTGTCATTTTAAAGGTGACGTTATATCGAAGGTGTCTTTTTTATCATCAAATCTACAACATGTAACATTCGAATGTAAAGAAATTGGGGATTg                                                                <  1:415319‑M2/151‑1 (MQ=255)                                                                                                                                                       ggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTTCTGATGGATAAAGATGCGCAGGGGTATATCGACCTGTCTGATTTGGATTTAACAAGTTGTCATTTTAAAg                                                                                                                                               <  1:3440‑M2/72‑1 (MQ=255)                                                                                                                                                       ggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTTCTGATGGATAAAGATGCGCAGGGGTATATCGACCTGTCTGATTTGGATTTAACAAGTTGTCATTTTAAAg                                                                                                                                               >  2:3440‑M2/99‑170 (MQ=255)                                                                                                                                                                               cggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTTCTGATGGATAAAGATGCGCAGGGGTATATCGACCTGTCTGATTTGGATTTAACAAGTTGTCATTTTAAAGGTGACGTTATATCGAAGGTGTCTTTTTTATCATCAAATCTACAACATGTAACATTCGAATGTAAAGAAATTGGGGATTGCAATTTTACTACTACAATAGTTGAt                                       <  1:17095‑M2/176‑1 (MQ=255)                                                                                                                                                                                      gcggaatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTTCTGATGGATAAAGATGCGCAGGTGTATATCGACCTGTCTGATTTGGATTTAACAAGTTGTCATTTTAATGGTGACGTTATATAGAGGGAGTCTTTTTTATCATCAAATCTACAACATGAAACATTCGATTGTAAGGAAATTGGGGATTGCAATTTTACTACTGCAAAAGTTGATAAAGTCat                               >  2:261985‑M2/68‑251 (MQ=255)                                                                                                                                                                                        tgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTTCTGATGGATAAAGATGCGCAGGGGTATATCGACCTGTCTGATTTGGATTTAACAAGTTGTCATTTTAAAGGTGACGTTATATCGAAGGTGTCTTTTTTATCATCAAATCTACAACATGTAACATTCGAATGTAAAGAAATTGGGGATTGCAATTTTACTACTGCAATAGTTGATAATGTCatat                             >  1:124952‑M2/66‑251 (MQ=255)                                                                                                                                                                                           atgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTTCTGATGGATAAAGATGCGCAGGGGTATATCGACCTGTCTGATTTGGATTTAACAAGTTGTCATTTTAAAGGTGACGTTATATCGAAGGTGTCTTTTTTATCATCAAATCTACAACATGTAACATTCGAATGTAAAGAAATTGGGGATTGCAATTTTACTACTGCAATAGTTGATAATGTCATAttt                           >  1:91436‑M2/63‑250 (MQ=255)                                                                                                                                                                                             gacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTTCTGATGGATAAAGATGCGCAGGGGTATATCGACCTGTCTGATTTGGATTTAACAAGTTGTCATTTTAAAGGTGACGTTATATCGAAGGTGTCTTTTTTATCATCAAATCTACAACATGTAACATTCGAATGTAAAGAAATTGGGGATTGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGa                        <  2:323201‑M2/191‑1 (MQ=255)                                                                                                                                                                                                aaagtcatcgggcaatatctgaacataaaactctattaataagttggagtcattaccTTCTGATGGATAAAGATGCGCAGGGGTATATCGACCTGTCTTATTTGGATTTAACAAGTTGTCATTTTAAAGGTGACGTTATATCGAAGGTGTCTTTTTTATCATCAAATCTACAACATGTAACATTCGAATGTAAAGAAATTGGGGAGTGCAATTTTACTACTGCAATAGTTGATAATGTCATAGTTAGATGt                     <  1:109587‑M2/194‑1 (MQ=255)                                                                                                                                                                                                    tcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTTCTGATGGATAAAGATGCGCAGGGGTATATCGACCt                                                                                                                                                                                  <  1:25542‑M2/37‑1 (MQ=255)                                                                                                                                                                                                    tcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTTCTGATGGATAAAGATGCGCAGGGGTATATCGACCt                                                                                                                                                                                  >  2:25542‑M2/54‑90 (MQ=255)                                                                                                                                                                                                      atcgggcattatctgaacataaaacactatcaataagttggagtcattaccTTCTGATGGATAAAGATGCGCAGGGGTATATCGACCTGTCTGATTTGGATTTAACAAGTTGTCATTTTAAAGGTGACGTTATATCGAAGGTGTCTTTTTTATCATCAAATCTACAACATGTAACATTCGAATGTAAAGAAATTGGGGATTGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGt               <  1:106895‑M2/200‑1 (MQ=255)                                                                                                                                                                                                            cattatctgaacataaaacactatcaataagttggagtcattaccTTCTGATGGATAAAGATGCGCAGGGGTATATCGACCTGTCTGATTTGGATTTAACAAGTTGTCATTTTAAAGGTGACGTTATATCGCAGGTGTCTTTTTTATCATCAAATCTACAACATGTAACATTCGAATGTAAAGAAATTGGGGATTGCAATTTtac                                                       >  1:294802‑M2/46‑205 (MQ=255)                                                                                                                                                                                                            cattatctgaacataaaacactatcaataagttggagtcattaccTTCTGATGGATAAAGATGCGCAGGGGTATATCGACCTGTCTGATTTGGATTTAACAAGTTGTCATTTTAAAGGTGACGTTATATCGAAGGTGTCTTTTTTATCATCAAATCTACAACATGTAACATTCGAATGTAAAGAAATTGGGGATTGCAATTTtac                                                       <  2:294802‑M2/160‑1 (MQ=255)                                                                                                                                                                                                               tatctgaacataaaacactatcaataagttggagtcattaccTTCTGATGGATAAAGATGCGCAGGGGTATATCGACCTGTCTGATTTGGATTTAACAAGTTGTCATTTTAAAGGTGACGTTATATCGAAGGTGTCTTTTTTATCATCAAATCTACAACATGTAACATTCGAATGTAAAGAAATTGGGGATTGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAAt      >  1:416040‑M2/43‑251 (MQ=255)                                                                                                                                                                                                                    gaacataaaacactatcaataagttggagtcattaccTTCTGATGGATAAAGATGCGCAGGGGTATAGCGACCTGTCTGATTTGGATTTAACAAGTTGTCATTTTAAAGGTGACGTTATATCGAAGGTGTCTTTTTTATCATCAAATCTACAACATGTAACATTCGAATGTAAAGAAATTGGGGATTGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGa  <  1:87445‑M2/213‑1 (MQ=255)                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                     TAACTCTTTGATGAAACATGATGTGGTGCAAGGAAATAATATAGTAGATCTTGATTTACTACGTAATTTAAATGGGGTGCCAGGTTTAAACAGAGATAACTTTATTTATATCAGCAATATTTTTTCAAATATAAAACAACGGAACGAAAAAATCATGCAATAAATATGTTTCGTGAAGTCTCAATCAGTAATGATACTATAAGTGTAAAATTCTACAGAAATGAAAAAAATTGAATGCGCTTGCAATTTTCTGATGGATAAAGATGCGCAGGGGTATATCGACCTGTCTGATTTGGATTTAACAAGTTGTCATTTTAAAGGTGACGTTATATCGAAGGTGTCTTTTTTATCATCAAATCTACAACATGTAACATTCGAATGTAAAGAAATTGGGGATTGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGA  >  NC_000913/4250735‑4251195

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.