New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2170171 =	NA (NA)	36 (1.110) +CAACACTTTAAAATGCCCTATATAGGGTTAACCAGTAATTATCTGTATGATAGCTTTGAGTTCGGGAGGA	21/338	0.5	NA	noncoding (1/1258 nt)	IS3	repeat region
	?	NC_000913	= 4519239	NA (NA)					noncoding (768/768 nt)	IS1	repeat region

GGCCTTTGAGGTCGTGGTATAGATGACGGATGGCTGGCCGCTGTATGAATCACGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCGACCATGTTTATTTCATACATTGTGGGTATTGTTCTTATTATCGCCGCTAATCAATAAAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCT  >  NC_000913/4518993‑4519480                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                  ggCCTTTGAGGTCGTGGTATAGATGACGGATGGCTGGCCGCTGTATGAATCACGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcct                                                                                                                                                                                                                                               >  1:145113‑M2/1‑247 (MQ=255)      ttGAGGTCGTGGTATAGATGACGGATGGCTGGCCGCTGTATGAATCACGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTTCCtcctccc                                                                                                                                                                                                                                            >  1:361962‑M2/1‑242 (MQ=255)      ttGAGGTCGTGGTATAGATGACGGATGGCTGGCCGCTGTATGAATCACGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctccc                                                                                                                                                                                                                                            >  1:471698‑M2/1‑242 (MQ=255)             cGTGGTATAGATGACGGATGGCTGGCCGCTGTATGAATCACGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaa                                                                                                                                                                                                                                    <  2:33978‑M2/250‑16 (MQ=255)              gTGGTATAGATGGCGGAGGGCTGGCCGCTGTATGAATCACGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaag                                                                                                                                                                                                                                  >  2:283456‑M2/1‑234 (MQ=255)                   aaagaTGACGGATGGCTGGCCTCTGTATGAATCACGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACGCTATCAGTAAGTTGGAGTCATTTCCtcctcccgaactcaaagctatc                                                                                                                                                                                                                             >  2:377999‑M2/3‑229 (MQ=255)                    gagATGACGGATGGCTGACCGCTTTAGGAATCACGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACCCGCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGGTACTGTCGTTCTCAAAATCGGGGGAGTTGCATGACAAGGTCATCGTGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatc                                                                                                                                                                                                                             >  2:10615‑M2/2‑228 (MQ=255)                                     gcCGCTGTATGAATCACGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACCCTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggt                                                                                                                                                                                                           >  2:107024‑M2/1‑211 (MQ=255)                                       cGCTGTATGAATCACGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggtta                                                                                                                                                                                                         >  2:463678‑M2/1‑209 (MQ=255)                                              tGAATCACGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctat                                                                                                                                                                                                  <  1:55342‑M2/251‑50 (MQ=255)                                                 aTCACGCCTGCAGGGAATGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtccttccgaactcaaagctatcatccagaaaattactggttaaccctatat                                                                                                                                                                                                <  2:401370‑M2/250‑52 (MQ=255)                                                                          gTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGGAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagatacttactggttaaccctatatagggcattttaacgtgttgtgatctt                                                                                                                                                                      <  1:308212‑M2/251‑78 (MQ=255)                                                                           ttATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatctt                                                                                                                                                                      <  2:165339‑M2/250‑78 (MQ=255)                                                                             aTCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacc                                                                                                                                                                   <  1:226234‑M2/251‑81 (MQ=255)                                                                             aTCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGGTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacc                                                                                                                                                                   >  2:188932‑M2/1‑171 (MQ=255)                                                                                         tACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtg                                                                                                                                                        >  1:70361‑M2/1‑159 (MQ=255)                                                                                                  cgcATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggc                                                                                                                                              <  2:189608‑M2/251‑102 (MQ=255)                                                                                                  cgcATTAAGCGACATAATCTGAATATGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGTCAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGCGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatctaacccagcaatagtggcaacgcggc                                                                                                                                              <  2:427161‑M2/251‑102 (MQ=255)                                                                                                    cATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggct                                                                                                                                             <  1:368917‑M2/250‑103 (MQ=255)                                                                                                          gCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACAGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagag                                                                                                                                        <  2:265615‑M2/249‑108 (MQ=255)                                                                                                           cGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagt                                                                                                                                     >  1:97648‑M2/1‑141 (MQ=255)                                                                                                              cATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGACATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaa                                                                                                                                   <  1:230160‑M2/250‑113 (MQ=255)                                                                                                                               acaacaTCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtga                                                                                                                 >  1:165339‑M2/1‑121 (MQ=255)                                                                                                                               acaacaTCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagacagaggtga                                                                                                                 >  2:226234‑M2/1‑121 (MQ=255)                                                                                                                               acaacaTCTGGCAAGGCTGGGACGGAAGTTACTGGCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtga                                                                                                                 >  1:83965‑M2/1‑121 (MQ=255)                                                                                                                                        ggCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacaag                                                                                                         >  1:117465‑M2/1‑112 (MQ=255)                                                                                                                                        ggCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacaa                                                                                                          >  2:99361‑M2/1‑112 (MQ=255)                                                                                                                                          cAAGGCTGGGAAGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgcgtaaactctcagtcagaggtgactcacaagacc                                                                                                      <  2:308628‑M2/251‑142 (MQ=255)                                                                                                                                                 gggACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacaagacaaaacag                                                                                                >  1:422961‑M2/1‑103 (MQ=255)                                                                                                                                                    aCGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacaagacaaaacagtttc                                                                                            >  1:194175‑M2/1‑100 (MQ=255)                                                                                                                                                           ttACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacaagacaaaacagtttcaaccagt                                                                                     <  2:243154‑M2/251‑159 (MQ=255)                                                                                                                                                           ttACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacaagacaa                                                                                                     <  1:35396‑M2/235‑143 (MQ=255)                                                                                                                                                           ttACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacaagacaa                                                                                                     >  2:35396‑M2/1‑93 (MQ=255)                                                                                                                                                                ttcGTTCTCAAAATCGGTGGAGTTGCATGACTAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccatcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacaagacaaaacagtttcaaccagtaaa                                                                                  >  1:447599‑M2/2‑88 (MQ=255)                                                                                                                                                                   gTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacaagacaaaacagtttcaaccagtaaaaaaac                                                                             >  2:97293‑M2/1‑85 (MQ=255)                                                                                                                                                                           aagcggtTGAGTTGCATGACAAGGTCATCTGGCCTTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCgccttccgaactcaaagctatcatacagataattactgggtaaccctatatagggcattttaaagggttgtgatcttacctagcaatagtggactcgcggctaagtgagtaaactctcagtctgatgtgactcacaagacaaaacagtttcaaccagtaaaaaaacttaaacac                                                                     >  1:301967‑M2/4‑77 (MQ=255)                                                                                                                                                                           aaTCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacaagacaaaacagtttcaaccagtaaaaaaacgtaaacac                                                                     <  1:281134‑M2/251‑175 (MQ=255)                                                                                                                                                                                  ggAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacaagacaaaacagtttcaaccagtaaaaaaacgtaaacaccattcgc                                                              >  1:76807‑M2/1‑70 (MQ=255)                                                                                                                                                                                  ggAGTTGCATGACAAGGTCAGCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacaagacaaaacagtttcaaccagtaaaaaaacgtaaacaccattcg                                                               >  1:168780‑M2/1‑70 (MQ=255)                                                                                                                                                                                             aCAAGGTCATCGGGCATTATCCGAACATAAAACACTATCAGTAAGGTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagttgacacgcggctaagtgagtaaactcacagtcagaggtgactcacaagacaaaacagtttcaatcagtaaaaaaacgtaaaccccattcgcatgaatttcgt                                                   >  2:70005‑M2/1‑59 (MQ=255)                                                                                                                                                                                                aGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacaagacaaaacagtttcaaccagtaaaaaaacgtaaacaccattcgcatgaatttcgtagt                                                >  1:189608‑M2/1‑56 (MQ=255)                                                                                                                                                                                                aGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacaagacaaaacagtttcaaccagtaaaaaaacgtaaacaccattcgcatgaattagatagg                                                <  2:259951‑M2/251‑196 (MQ=255)                                                                                                                                                                                                aGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacaagacaaaacagtttcaaccagtaaaaaaacgtaaacaccattcgcatgaatt                                                       >  1:259951‑M2/1‑56 (MQ=255)                                                                                                                                                                                                 ggTCTTCGGGCATTATCTGAACAGAAAACACTACCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacaagacaaaacagtttcaaccagtaaaaaaacgtaaactccattcgcatgaatttcgtagtt                                               >  2:317787‑M2/1‑55 (MQ=255)                                                                                                                                                                                                        gggCATTATCTGAACATAAAACACTATCAGTAAGATGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacaagacaaaacagtttcaaccagtaaaaaaacgtaaacaccattcgcatgaatttcgtagtaaagatct                                        <  1:375355‑M2/251‑204 (MQ=255)                                                                                                                                                                                                                                              aGTCCTTACCtcctcccgaacgcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacaagacaaaacagtttcaaccagtaaaaaaacgtaaacaccattcgcatgaatttcgtagttaagatctgaagcttgcagaatgcatcggtgttactgccggagtcc  >  2:108574‑M2/1‑10 (MQ=255)                                                                                                                                                                                                                                              aGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacaagacaaaacagtttcaaccagtaaaaaaacgtaaacaccattcgcatgaatttcgtagttaagatctgaagcttgcagaatgcatcggtgttactgccggcgtcc  <  1:66110‑M2/251‑242 (MQ=255)                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                  GGCCTTTGAGGTCGTGGTATAGATGACGGATGGCTGGCCGCTGTATGAATCACGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCGACCATGTTTATTTCATACATTGTGGGTATTGTTCTTATTATCGCCGCTAATCAATAAAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCT  >  NC_000913/4518993‑4519480

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.