| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 20,703 | +GCAAGAACCTGCAA | intergenic (‑195/+112) | insA1 ← / ← rpsT | IS1 family protein InsA/30S ribosomal subunit protein S20 |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 20703 | 2 (0.040) | 26 (0.600) +GCAAGAACCTGCAA |
20/450 | 0.9 | 93.2% | intergenic (‑195/+112) | insA1/rpsT | IS1 family protein InsA/30S ribosomal subunit protein S20 |
| ? | NC_000913 | 20704 = | 2 (0.040) | intergenic (‑196/+111) | insA1/rpsT | IS1 family protein InsA/30S ribosomal subunit protein S20 | |||||
TCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGTACAACGGCATGTCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGTCAGGTTAGCCTTATGACGTGCAGCTTTGTTTTTGTGGATCAGACCTTTAGCAGCCTGACGGTCCACGATCGGTTGCATTTCGTTAAATGCTTTCTGTGCAGCAGCTTTGTCGC > NC_000913/20530‑20954 | tcatACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGCGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCAGGAAGAGTTCAGATAGTACAACGGCATGTCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAACAACCCGCTTgcg > 2:454868/1‑251 (MQ=255) aaaatagagtggtcttaagtttaatacctcaatgtgtatcacaatatccacattctttgtagggggtctggagattgagtagatattcttgttcagaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCtt > 1:305898‑M2/178‑251 (MQ=255) tcttaagtttaatacctcaatgtgtatcacaatatccacattctttgtagggggtctggagattgagtagatattcttgttcagaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCtttt > 1:232909‑M2/166‑251 (MQ=255) aagtttaatacctcaatgtgtatcacaatatccacattctttgtagggggtctggagattgagtagatattcttgttcagaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGggctttttaac > 1:224553‑M2/162‑248 (MQ=255) taccgCAATGGGTATCACAATATACACATTCTTTGTCGGGG‑GTCTGGCGTTTGAGTCGATATTCTTGTTCAGATTGTATCAGCCGATGGTTCTACGATTCTTAAGCCACTAAGAGTTCAGATACTACCACGGCATGTCTGCAAGCACCTGCAACTTTTGACTATCTGGCCACCGGCAGTGTGTTCTCTACCGCATCACAAAAGCATCCGGCCCAAAAAATACCGCTTTTGCAGGCTTTTTCACAAAACTTc > 2:31573/1‑251 (MQ=255) atacctcaatgtgtatcacaatatccacattctttgtagggggtctggagattgagtagatattcttgttcagaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCtt > 1:169582‑M2/155‑251 (MQ=255) caatgtgtatcacaatatccacattctttgtagggggtctggagattgagtagatattcttgtccagaatgtatcagccgatggttctactattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCa < 1:156224‑M2/102‑1 (MQ=255) aatgtgtatcacaatatccacattctttgtagggggtctggagattgagtagatattcttgttcagaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAgtgtgt > 1:147465‑M2/148‑177 (MQ=255) aatgtgtatcacaatatccacattctttgtagggggtctggagattgagtagatattcttgttcagaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAgtgtgt < 2:147465‑M2/30‑1 (MQ=255) aatgtgtatcacaatatccacattctttgtagggggtctggagattgagtagatattcttgttcagaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCaa > 1:348856‑M2/148‑250 (MQ=255) cacaatatccacattctttgtagggggtctggagattgagtagatattcttgttcagaatgtatcagccgatgggtctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGAt < 2:232909‑M2/112‑1 (MQ=255) ccacattctttgtagggggtctggagattgagtagatattcttgttcagaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGt < 1:480818‑M2/121‑1 (MQ=255) ggtctggagattgagtagatattcttgttcagaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCAGAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGt < 1:315173‑M2/138‑1 (MQ=255) gggatttagtagatatacgtggtcagaatgtagcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGTCAGGtt < 2:408592‑M2/144‑1 (MQ=255) tcttgttcagaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGAGCAGTCTGGTTAGCCTTATGACGTGc > 2:321475‑M2/92‑250 (MQ=255) agaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGTCAGGTTAGCCTTATGACGTGCAGCTTTGtt < 1:208804‑M2/168‑1 (MQ=255) aatgtatcagccgatggttctacgtttcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGTCAGGTTAGCCTTATGACGTGCAGCTTTGtttt < 1:239796‑M2/170‑1 (MQ=255) tatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACCAAAGCAGCAGGCATaaaa > 1:361050‑M2/78‑141 (MQ=255) tatcagccgatggatctacgattcttaagccacgaagagttcagatagttcaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATaaaa < 2:361050‑M2/64‑1 (MQ=255) atggttttacgattcttaagccacgaagagttcagatagttcaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGTCAGGTTAGCCTTATGACGTGCAGCTTTGTTTTTGTGGATCAGAcc < 2:270921‑M2/183‑1 (MQ=255) acgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCAt > 1:253620‑M2/61‑120 (MQ=255) acgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCAt < 2:253620‑M2/60‑1 (MQ=255) aagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGTCAGGTTAGCCTTATGACGTGCAGCTTTGTTTTTGTGGATCAGACCTTTAGCAGCCTGACGGTCCACGATc > 1:151795‑M2/44‑251 (MQ=255) agagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAACAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGCTCTGTGCAGTCAGGtt > 2:403923‑M2/43‑186 (MQ=255) agagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGTCAGGtt < 1:403923‑M2/144‑1 (MQ=255) agtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGTCAGGTTAGCCTTATGACGTGCAGCTTTGTTTTTGTGGATCAGACCTTTAGCAGCCTGACGGTCCACGATCGGTTGCATTTc < 2:151795‑M2/219‑1 (MQ=255) gtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCCTCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTATGCCAGTTTGTTGATCTGTGCAGTCTGGTTAGCCTTATGACGTGCAGCTTTGTTTTTGTGGATCAGACCTTTAGCAGCCTGACGGACCACGATCGGTTGCATTTCGt > 2:5630‑M2/31‑251 (MQ=255) gcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGTCAGGTTAGCCTTATGACGTGCAGCTTTGTTTTTGTGGATCAGACCTTTAGCAGCCTGACGGTCCACGATCGGTTGCATTTCGTTAAATGCt > 1:194145‑M2/23‑251 (MQ=255) aaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGTCAGGTTAGCCTTATGACGTGCAGCTTTGTTTTTGTGGATCAGACCTTTAGCAGCCTGACGGTCCACGATCGGTTGCATTTCGTTAAATGCTTTCTGTGCAGCAGCTTTGTc > 2:326627‑M2/3‑251 (MQ=255) ctTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGTCAGGTTAGCCTTATGACGTGCAGCTTTGTTTTTGTGGATCAGACCTTTAGCAGCCTGACGGTCCACGATCGGTTGCATTTCGTTAAATGCTTTCTGTGCAGCAGCTTTGTCGc > 2:56390/1‑251 (MQ=255) | TCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGTACAACGGCATGTCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGTCAGGTTAGCCTTATGACGTGCAGCTTTGTTTTTGTGGATCAGACCTTTAGCAGCCTGACGGTCCACGATCGGTTGCATTTCGTTAAATGCTTTCTGTGCAGCAGCTTTGTCGC > NC_000913/20530‑20954 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |