New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 275508	2 (0.040)	27 (0.610)	26/458	0.6	96.6%	coding (184/1404 nt)	mmuP	S‑methyl‑L‑methionine transporter
	?	NC_000913	372749 =	0 (0.000)					coding (635/810 nt)	mhpD	2‑hydroxypentadienoate hydratase

TTGGATGTTTAGATGTCCATACGTTTAGAAGGTTATATGCAAACAACACAACAAAATGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGTTATGCAGTGTCTGGGCGAGCTGTCGGTCGCGATGCCGGAGACCGGAGCGTTTCACGTTTATGCCGCGCGCTATCTTGGTCCGGCTACCGGGTATACCGTGGCCTGGCTTTACTGGCTGACCTGGACCGTGGCGCTGGGTTCGAGCTTTACCGCCGCTGGATTCTGTATGCAGTACTGGTTTCCACAGGTGCCGGTATGGGTCTGGTGCGTGGTGTTCTGCGCGATTATTTTTGGTCTGAAT  >  NC_000913/275289‑275750                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                   ttGGATGTTTAGATGTCCATACGTTTAGAAGGTTATATGCAAACAACACAACAAAATGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaacc                                                                                                                                                                                                                        <  1:232048‑M1/248‑29 (MQ=255)             aTGTCCATACGTTTAGAAGGTTATATGCAAACAACACAACAAAATGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGGGCGGTGGGGGGCTGGCTGGgacgcaaaatagcaaggctgggggaaacgctgcgcacccgggg                                                                                                                                                                                                         >  1:278133‑M1/1‑208 (MQ=255)                  cATACGTTTAGAAGGTTATATGCAAACAACACAACAAAATGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGGAAGCTGCTGGCCTTTCTTATTTGTGCGCTGGTGGTCTGGCTGGcccgcaaaatagccagtctggggggaccgctgcgcaccggggatatcc                                                                                                                                                                                                    >  1:239871‑M1/1‑203 (MQ=255)                              aGGTTATATGCAAACAACACAACAAAATGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAAAGCTGCTGGCCTCTCTGATTGGTTCGCCGGTGGTCTGGATGGcacgcaaaaaggcccggatgggggtaccgctgcgccccggcgaaatcattattaccggtg                                                                                                                                                                                        >  1:343450‑M1/1‑191 (MQ=255)                                   atatGCAAACAACACAACAAAATGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcatta                                                                                                                                                                                   <  1:216798‑M1/251‑66 (MQ=255)                                        cAAACAACACAACAAAATGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGGACGCTGCCGGCCCATCTGAATTGTGCGCGGGGGGTCTGGCTGGcacgcaaaatgggcagtctggggggaacgccgcgccccggagaaatcattctttccggggcattcagtac                                                                                                                                                                              >  1:314516‑M1/1‑181 (MQ=255)                                                            gcCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgg                                                                                                                                                          <  1:428406‑M1/251‑91 (MQ=255)                                                                              gAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATGGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcggtcgatcgttttgaagccc                                                                                                                                        <  2:278133‑M1/251‑109 (MQ=255)                                                                                             gATTATGCTTTCCGTGGGCGGGGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaaggcgggcgatcgttttgaagcccatattgaaggcatag                                                                                                                         <  2:432786‑M1/251‑124 (MQ=255)                                                                                                      gacctgggtcgtcgtgattgccacagTATGATTCGTCAATACCGCGTACATCATTGCCACCACGGGAGCGGATGGAACGCTGCTGGCTTATCTGATTGGTGCGCGGTTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggctatcgttttgaagcacatattgaaggcataggttcagtt                                                                                                                 <  2:191831‑M1/238‑132 (MQ=255)                                                                                                           tGGGCGGCGTTATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgatcgttttgaagcccatattgaaggcataggttcagttgctgc                                                                                                            <  2:314516‑M1/250‑137 (MQ=255)                                                                                                                           cacaGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgatcgttttgaagcccatattgaaggcataggttcagttgctgcgacagtttcaagcgcag                                                                                           <  2:300581‑M1/251‑154 (MQ=255)                                                                                                                                              acctggtacaGCATTTCCGCCACTGGCGCGGCGTGAACGCTGCTGGCCTAGCTGATTGGTGCGCTGGTGGTCTTGCTTGcccgcaaaatggtcagtctgtgggaaccgctgcgcaccggagatatcattcttaccggtgcattaggtcctatggtggcggtgaatgcgggcgatcgttttgaagcccatattgaaggcatatggtcagttgctgcgacattttcaagcgcagccccaaaaggaagtctgt                                                                         <  2:50215‑M1/246‑172 (MQ=255)                                                                                                                                                   gttcatcatttcCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattagggccgatggtggcggtgaatgcgggcgatcgttttgaagcccatattgaaggcataggttcagttgctgcgacatttgcaagcgcagccccaaaaggaagtctgtcatgag                                                                   <  2:243130‑M1/248‑178 (MQ=255)                                                                                                                                                   gTACAGCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGGGCGCTGGTGGGCTGGCGGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgatcgttttgaagcccatattgaaggcataggttcagttgctgcgacattttcaagcgcagccccaaaaggaagtctgtcatgag                                                                   <  2:239871‑M1/251‑178 (MQ=255)                                                                                                                                                         catTTCCCCCACGGGGGCGGCGGGACCTCTGCTGGCTTATCTGATTGGTGCGCTGGTGGTCTGGCTGTTTAGGCAGTGTCTGGGCGAGCTGTCGGTCGCGATGCCGGAGACCGGAGCGTTTCCCGTTTATGCCGCGCGCTATCTTGGTCCGGCTCCCGGGTATACCGGGGCCTGGTTTTACTGGCTGACCTGGACCGTGGCGCTGGGTTCGAGCTTTACCGCCGCTGGATTCTGTATGCAGTACTGGTTTc                                                             <  1:163926/251‑1 (MQ=255)                                                                                                                                                              ccaccaCTGGAGCGGCGGGAACGCTGCTGGCCTAGCTGATTGGGGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgatcgttttgaagcccatattgaaggcataggttcagttgctgcgacattttcaagcgcagccccaaaaggaagtctgtcatgagtaagcgtaaag                                                        <  2:406201‑M1/251‑189 (MQ=255)                                                                                                                                                                              gggAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgatcgttttgaagcccatattgaaggc                                                                                                                             >  2:226698‑M1/1‑47 (MQ=255)                                                                                                                                                                              gggAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgatcgttttgaagcccatattgaaggc                                                                                                                             <  1:226698‑M1/166‑120 (MQ=255)                                                                                                                                                                                   cGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgatcgttttgaagcccatattgaaggcataggttcagttgctgcgacattttcaagcgcagccccaaaaggaagtctgtcatgagtaagcgtaaagtcgccattatcggttctggca                                   <  2:180010‑M1/251‑210 (MQ=255)                                                                                                                                                                                          ggCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgatagttttgaagcccatattgaaggcataggttaagttgctgcgacattttcaagcgcagccccaaaaggaagtctgtcatgagtaagcgtaaagtcgccattatcggttctggcaacattgg                            >  2:465125‑M1/1‑35 (MQ=255)                                                                                                                                                                                              tATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgatcgttttgaagcccatattgaaggcataggttcagttgctgcgacattttcaagcgcagccccaaaaggaagtctgtcatgagtaagcgtaaagtcgccattatcgattctggcaacattggtacc                        >  1:281002‑M1/1‑31 (MQ=255)                                                                                                                                                                                                  tGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgatcgttttgaagcccatattgaaggcataggttcagttgctgcgacattttcaagcgcagccccaaaaggaagtctggcatgagtaagcgtcaagtcgccattatcggttctggccacaatggtaccgttc                    >  2:156820‑M1/1‑27 (MQ=255)                                                                                                                                                                                                   gATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgatcggtttgaagcccatattgaaggcataggttcagttgctgcgacattttcaagcgcagccccaaaaggaagtctgtcatgagtaagcgtaaagtcgccattatcggttctggcaacattggtaccgat                     <  2:23333‑M1/249‑224 (MQ=255)                                                                                                                                                                                                    aTTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgacccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgatcgttttgaagcccatattgaaggcataggatcagttgctgcgacattttcaagcgcagccccaaaaggaagtctgtcatgagtaagcgtaaaggcgccattatcggttctggcaacattgggaccgttctg                  >  2:139454‑M1/1‑25 (MQ=255)                                                                                                                                                                                                      gggtGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgatcgttttgaagcccatattgaaggcataggttcagttgctgcgacattttcaagcgcagccccaaaaggaagtctgtcatgagtaagcgtaaagtcgccattatcggttctggcaacattggtaccgatctgat                <  2:225810‑M1/250‑229 (MQ=255)                                                                                                                                                                                                             cTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgatcgttttgaagcccatattgaaggcataggttcagttgctgcgacattttcaagcgcagccccaaaaggaagtctgtcatgagtaagcgtaaagtcgccattatcggttctggcaacattggaaccgatctgatgattaa          >  1:301468‑M1/1‑16 (MQ=255)                                                                                                                                                                                                                  ggtCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgctcgttttgaagcccatattgacggcataggatcagttgctgcgacattttcaagcgcagccccaaaaggaagtctgtcatgagtaagcgtaaagtcgccattatcggttctggcaaccttggtaccgatctgatgattaaaatttt    >  1:308853‑M1/1‑11 (MQ=255)                                                                                                                                                                                                                       ggctggTTATGTAGTGTTTGGCCGGGCTGTCGGTCGCGATGCGGGAGGCCGTTGCGTTTCGCGTTTGGGCCGCGCGCTATCTGGTTCCGGCTCCCGGTTATTCGGGGGCTTGGCTTCACGGGCTGACGGGGGCCGTGGGGCTGGTTTCGGCCTTTACCGCCGCTGGATTCTGTATGCAGTACTGGTTTCCACAGGTGCCGGTATGGGTCTGGTGCGTGGTGTTCTGCGCGATTATTTTTGGTCTGAAt  <  1:120745/248‑1 (MQ=255)                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                   TTGGATGTTTAGATGTCCATACGTTTAGAAGGTTATATGCAAACAACACAACAAAATGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGTTATGCAGTGTCTGGGCGAGCTGTCGGTCGCGATGCCGGAGACCGGAGCGTTTCACGTTTATGCCGCGCGCTATCTTGGTCCGGCTACCGGGTATACCGTGGCCTGGCTTTACTGGCTGACCTGGACCGTGGCGCTGGGTTCGAGCTTTACCGCCGCTGGATTCTGTATGCAGTACTGGTTTCCACAGGTGCCGGTATGGGTCTGGTGCGTGGTGTTCTGCGCGATTATTTTTGGTCTGAAT  >  NC_000913/275289‑275750

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.