| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,105,699 | IS1 (+) +9 bp | coding (286‑294/312 nt) | ymdA → | uncharacterized protein YmdA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 290634 = | NA (NA) | 41 (0.890) | 36/478 | 0.3 | 100% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | NC_000913 | 1105699 = | 0 (0.000) | coding (286/312 nt) | ymdA | uncharacterized protein YmdA | |||||
| * | ? | NC_000913 | = 291401 | NA (NA) | 21 (0.460) | 21/478 | 1.0 | 100% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 1105707 | 0 (0.000) | coding (294/312 nt) | ymdA | uncharacterized protein YmdA | |||||
GCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/291158‑291401‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCAC‑TTTTACTGAGGCTATTTGCGCGTTTTTGACATTGCCGCTCATTAACGCTTTGCTGGAGTAGGTTTTGCCCGGAATAGAACCATTCTGTGGGCAGTTCATTTCTACGGGTGATGACTGGGTGCTGACGTCACATGCCGGTTCCACAATTTGGCCATAAAAATGGATCACGCCCCCTTGCACGGTGCTTCCAGCAATGGCAATAAAAGGAA < NC_000913/1105707‑1105460 GCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACA < 1:60419/251‑1 CATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGC > 1:337530/1‑251 ATGATTTTCTGGTGCGGACCGTGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTCTGTTTAT < 1:416449/251‑1 GATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTCTGTTTATCA < 1:449574/251‑1 TCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTCTGTTTATCAAGAT < 1:90949/250‑1 ACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTGTCTGTTTATCAAGATACTGCAC‑TTT < 1:145402/250‑1 GGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGAAGCATCACCCATTACAGCCAGCTTTTTCTGTTTTTCAAGATACTGCAC‑TTTTACT > 2:199535/1‑251 AAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCAC‑TTTTACTGAGGCTAT < 1:262352/251‑1 AGCGGGGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGGTAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTCTGTTTAGCAAGATACTGCAC‑TTTTACTGAGGCTATT < 1:220218/251‑1 TACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCAC‑TTTTACTGAGGCTATTTGCGCGTTTTTGACATTGCCGCTCATTAACG < 1:297113/250‑1 ACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCAC‑TTTTACTGAGGCTATTTGCGCGGTTTTGACATTGCCGCTCATTAACGCT < 1:134778/251‑1 CGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCAC‑TTTTACTGAGGCTATTTGCGCGTTTTTGACATTGCCGCTCATTAACGCTT < 2:133376/251‑1 AGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCAC‑TTTTACTGAGGCTATTTGCGCGTTTTTGACATTGCCGCTCATTAACGCTTTGCT > 2:42758/1‑251 GAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCAC‑TTTTACTGAGGCTATTTGCGCGTTTTTGACATTGCCGCTCATTAACGCTTTGCTGGAGTAGTTTTTGCCCGGAATAGAACCATTCTGTGGGCAGTTCATTTCTACGGGTGATGACTGGGTG < 1:289071/250‑1 cCAAAAACACCATCAGACACGAAACCAGTAAGTTGGCAGCATAGCCCAGAACAGCCAGCTTTTTCTGTTTATCAAGATACTGCAC‑TATTACTGAGGCTATTTGCGCGTTTTTGATGTTGCCGCTCATTAACGCTTTGCTGGAGGAGGTTTTGCCCGGAATAGAACCATTCTGTGGGCAGTTCATTTCTACGGGCGATGACTTGGTGCTGACGTCACATGCCGGTTCCACAAATTGGCCATAAAATTGGATC < 2:202016/250‑1 CAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCAC‑TTTTACTGAGGCTATTTGCGCGTTTTTGACATTGCCGCTCATTAACGCTTTGCTGGAGTAGGTTTTGCCCGGAATAGAACCATTCTGTGGGCAGTTCATTTCTACGGGTGATGACTGGGTGCTGACGTCACATGCCGGTTCCACAATTTGGCCATAAAAATGGATCA < 1:199535/251‑1 AAATGAGTAATTTGGCAGCATCACCCAGTACAGCTAGCTTTTTCCGTTTATCAATATACTGCTCGTTATA‑TGGGGCTTGTTGCGCGTTTTTGACATTGCCGCTCATTAACGCTTTGCTGGAGTAGGGTTTGCCCGGAATAGAACCATTCTGGGGGCAGTTCATTTCTACGGGTGATGACTGGGTGCTGACGTCGCATGCCGGTGCCACAATTTGGCCATAAAAATGGATCACGCCCCCTTGCACGGTGCTT < 2:336428/251‑1 AAATCAGTAAGTTGGCTGCATCACCCATGACAGCCAGCTTTTTCTGTTTATCAAGATACTGCAC‑GTTTACTGAGGCTATTTGCGCGTTTTTGACATTGCCGCTCATTAACGCTTTGCTGGAGTAGGTTTTGCCCGGAATAGAACCATTCTTTGGGCAGTTCATTTCTACGGGTGATGACTGGGTGCTGACGTCACATGCCGGTTCCACAATTTGGCCATAAAAATGGATCACGCCCCCTTGCACGGTGCT < 1:195252/250‑1 ATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTCTTTTTATCAAGATACTGCAC‑TTTTACTGAGGCTATTTGCGCGTTTTTGACATTGCCGCTCATTAACGCTTTGCTGGAGTAGGTTTTGCCCGGAGTAGAACCATTCTGTGGGCAGTTCATTTCTACGGGTGATGACTGGGTGCTGACGTCACATGCCGGTTCCACAATTTGGCCATAAAAATGGATCACGCCCCCTTGCACGGTGCTTCC < 1:261110/251‑1 AGCATCACCCATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCAC‑TTTTACTGAGGCTATTTGCGCGTTTTTGACATTGCCGCTCATTAACGCTTTGCTGGAGTAGGTTTTGCCCGGAATAGAACCATTCTGTGGGCAGTTCATTTCTACGGGTGATGACTGGGTGCTGACGTCACATGCCGGTTCCACAATTTGGCCATAAAAATGGATCACGCCCCCTTGCACGGTGCTTCCAGCAATGGCAATA > 1:315701/1‑250 cCCCATTCCAGCCTGCTTTTTCTGTTTATCAAGATACTGCAC‑TTTTACTGAGGCTATTTGCGCGTTTTTGACATTGCCGCTCATTAACGCTTTGCTGGAGTAGGTTTTGCCCGGAATAGAACCATTCTGTGGGCAGTTCATTTCTACGGGTGATGACTGGGTGCTGACGTCACATGCCGGTTCCACAATTTGGCCATAAAAATGGATCACGCCCCCTTGCACGGTGCTTCCAGCAATGGCAATAAAAGGAA < 2:225792/250‑1 GCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/291158‑291401‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCAC‑TTTTACTGAGGCTATTTGCGCGTTTTTGACATTGCCGCTCATTAACGCTTTGCTGGAGTAGGTTTTGCCCGGAATAGAACCATTCTGTGGGCAGTTCATTTCTACGGGTGATGACTGGGTGCTGACGTCACATGCCGGTTCCACAATTTGGCCATAAAAATGGATCACGCCCCCTTGCACGGTGCTTCCAGCAATGGCAATAAAAGGAA < NC_000913/1105707‑1105460 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |