| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,773,173 | Δ1 bp | coding (893/1914 nt) | mtlA → | mannitol‑specific PTS enzyme IICBA component |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,773,173 | 0 | G | . | 94.0% | 192.4 / 4.5 | 51 | coding (893/1914 nt) | mtlA | mannitol‑specific PTS enzyme IICBA component |
| Reads supporting (aligned to +/- strand): ref base G (3/0); new base . (30/17); total (34/17) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.42e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.66e-01 | |||||||||||
CCCAGGTCCAGGTATGGGCGTGCTGCTGGCGTACATGTTCTTTGGTCGTGGTAGCGCTAAACAGTCTGCGGGCGGTGCGGCAATCATCCACTTCCTGGGGGGTATCCACGAAATCTACTTCCCGTATGTGCTGATGAATCCGCGTCTGATCCTCGCAGTCATCCTCGGCGGTATGACTGGCGTGTTCACGCTGACTATCCTGGGCGGTGGTCTGGTTTCTCCGGCATCTCCGGGTTCTATCCTTGCTGTACTGGCGATGACACCAAAAGGTGCTTACTTCGCTAACATCGCGGGTGTGTGTGCGGCGATGGCTGTCTCCTTCGTTGTCTCTGC‑TATTTTGCTGAAAACCAGCAAAGTGAAAGAAGAAGATGATATTGAAGCAGCAACTCGTCGTATGCAGGACATGAAAGCTGAGTCTAAAGGCGCATCTCCGCTGTCTGCTGGCGATGTGACTAACGACCTGAGCCACGTACGTAAAATC > NC_000913/3772940‑3773420 | cccAGGTCCAGGTATGGGCGTGCTGCTGGCGTTCATTTTCTTTGGTCGTGGTAGCGCTAAACAGTCTGCGGGCTGTGCGGCAATCATCCACTTCTTGGGGGGTATCCACGAAATCTACTTCCCGTATGTGCTGATGAATCCGCGTCTGATCCTCGCAGTCATCCTCGGCGGTATGACTGGCGTGTTCACGCTGACTATCCTGGGCGGTGGTCTGGTTTCTCCGGCATCTCCGG‑TTTTATCCTTGCTGTa < 2:208607/249‑1 (MQ=255) aggtccaggtATGGGCGTGCTGCTGGCGTACATGTTCTTTGGTCGTGGTAGCGCTAAACAGTCTGCGGGCGGTGCGGCAATCATCCACTTCATGGGGGGTATCCACGAAATCTACTTCCCGTATGTGCTGATGAATCCGCGTCTGATCCTCGCAGTCATCCTCGGCGGTATGACTGGCGTGTTCACGCTGCATATCCTGGGCGGGGGTCTGGGTTTGCCGGCGTCTCCGG‑TTTTATCCTTTCTTTACTGGc > 2:234766/1‑251 (MQ=255) gtATGGGCGTGCTGCTGGCGTACATGTTCTTTGGTCGTGGTAGCGCTAAACAGTCTGCGGGCGGTGCGGCAATCATCCACTTCCTGGGGGGTATCCACGAAATCTACTTCCCGTATGTGCTGATGAATCCGCGTCTGATCCTCGCAGTCATCCTCGGCGGTATGACTGGCGTGTTCACGCTGACTATCCTTGGCGGTGGTCTGGTTTCTCCGGCATCTCCGG‑TTTTATCCTTGCTGTACTGGCGATGacac > 1:321322/1‑251 (MQ=255) gctgGCGTACATGTTCTTTGGTCGTGGTAGCGTTAAACAGTCTGCTGGCGGTGCGGCAATCATCCACTTCCTGGGGGGTATCCACGAAATCTACTTCCCGTATGTGCTGATGAATCCGCGTCTGATCCTCGCAGTCATCCTCGGCGGTATGACTGGCGTGTTCACGCTGACTATCCTGGGCGGTGGTCTGGTTTCTCCGGCATCTCCGG‑TTTTATCCTTGCTGTACTGGCGATGACACCAAAAGGTGCtt < 2:82240/250‑1 (MQ=255) gctgGCGTACATGTTCTTTGGTCGTGGTAGCGCTAAACAGTCTGCGGGCGGTGCGGCAATCATCCACTTCCTGGGGGGTATCCACGAAATCTACTTCCCGTATGTGCTGATGAATCCGCGTCTGATCCTCGCAGTCATCCTCGGCGGTATGACTGGCGTGTTCACGCTGACTATCCTGGGCGGTGGTCTGGTTTCTCCGGCATCTCCGG‑TTTTATCCTTGCTGt > 1:392922/1‑224 (MQ=255) gcgggCGTACATGTTCTTTGGGCGTGGTAGCGCTAAACAGTCTGCGGGCGGTGCGGCAATCATCCACTTCCTGGGGGGTATCCACGAAATCTACTTCCCGTATGTGCTGATGAATCCGCGTCTGATCCTCGCAGTCATCCTCGGCGGTATGACTGGCGTGTTCACGCTGACTATCCTGGGCGGTGGTCTGGTTTCTCCGGCATCTCCGG‑TTTTATCCTTGCTGt < 2:392922/221‑1 (MQ=255) actgGCGTACATGTTCTTTGGTCGTGGTAGCGCTAAACAGTCTGCGGGCGGTGCGGCAATCATCCACTTCCTGGGGGGTATCCACGAAATCTACTTCCCGTATGTGCTGATGAATCCGCGTCTGATCCTCGCAGTCATCCTCGGCGGTATGACTGGCGTGTTCACGCTGACTATCCTGGGCGGTGGGCTGGTTTCTCCGGCATC‑CCCGGTTTTATCCTTGCTGTACTGGCGCTGGCACCAAAAggggact > 2:166656/2‑245 (MQ=255) aCATGTCCTTTGGTCGTGGTAGCGCTAAACAGTCTGCGTGCGGTGCGGCAATCATCCACTCCCTGGGGGGTATCCACGAAATCTACTTCCCGTATGTGCTGATGAATCCGCGTCTGATCCTCGCAGTCATCCTCGGCGGTATGACTGGCGTGTTCACGCTGACTATCCTGGGCGGTGGTCTGGTTTCTCCGGCATCTCCGG‑TTTTATCCGTGCTTTACTGGCGATGACACCAAAAGGTGCTTACTTCGCt < 2:246364/250‑1 (MQ=255) atttGGTCGTGGTAGCGCTAAACAGTCTGCGGGCGGTGCGGCAATCATCCACTTCCTGGGGGGTATCCACGAAATCTACTTCCCGTATGTGCTGATGAATCCGCGTCTGATCCTCGCAGTCATCCTCGGCGGTCTGACAGGCGTGTTCACGCTGACTGTCCTGGGCGGGGGGATGGTTTCTCCGGCATCTTCGG‑TTTTATACTTGCTGTGCTGGCGATGTCCCCCAAAGGTGCTTGCTTCGCTAACATcgc > 2:100001/2‑251 (MQ=255) tGCGGGCGGTGCGGCAATCATCCACTTCCTGGGGGGTATCCACGAAATCTACTTCCCGTATGTGCTGATGAATCCGCGTCTGATCCTCGCAGTCATCCTCGGCGGTATGCCTGGCGTGTTCACGCTGACTATCCTGGGCGGTGGTCCGGGTTCTCCGGCATCTCCGG‑TTTTATCCTTGATGTACTGGCGATGGCACCAACAGGGGCTTACTTCGCTACCATCGCGGGTGGGTGTGGGGCGCTGGCTGtctc > 2:442253/1‑251 (MQ=255) gcgggcggTGCGGCAAGCATCCACTTCCTGGGGGGTATCCACGAAATCTACTGCCCGTATGAGCTGATGAATCCGCGTCTGATCCTCGCAGTCATCCGCGGCGGTATGACTGGCGTGTTCACGCTGACTATCCTGGGCGGTGGTCTGGTTTCTCCGGCATCTCCGG‑TTTTATCCTTGCTGTACTGGCGATGACACCAAAAGGTGCTTACTTCGCTAACATCGCGGGTGTGTGTGCGGCGATGGCTGtc < 2:110673/248‑1 (MQ=255) gggcggTGCGGCAATCATCCACTTCCTGGGGGGTATCCACGAAATCTACTTCCCGTATGTGCTGATGAATCCGCGTCTGATCCTCGCAGTCATCCTCGGCGGTATGACTGGCGTGTTCACGCTGACTATCCTGGGCGGTGGTCTGGTTTCTCCGGCATCTCCGG‑TTTTATCCTTGCTGTACTgg < 1:337974/184‑1 (MQ=255) gggcggTGCGGCAATCATCCACTTCCTGGGGGGTATCCACGAAATCTACTTCCCGTATGTGCTGATGAATCCGCGTCTGATCCTCGCAGTCATCCTCGGCGGTATGACTGGCGTGTTCACGCTGACTATCCTGGGCGGTGGTCTGGTTTCTCCGGCATCTCCGG‑TTTTATCCTTGCTGTACTgg > 2:337974/1‑184 (MQ=255) catcCACTTCCTGGGGGGTATCCACGAAATCTACTTCCCGTATGTGCTGATGAATCCGCGTCTGATCCTCGCAGTCATCCTCGGCGGTATGACTGGCGTGTTCACGCTGACTATCCTGGGCGGTGGTCTGGTTTCTCCGGCATCTCCGG‑TTTTATCCTTGCTGTATTGGCGATGACACCAAAAGGTGCTTACTTCGCTAACATCGCGGGTGTGTGTGCGGCGATGGCTGTCTCCTTCGTTGTCTCTGC‑TAt > 1:179399/1‑251 (MQ=255) ccttctCCTGGGGGGTATCCACGAAATCTACTTCCCGTATGTGCTGATGAATCCGCGTCTGAGCCTCGCAGTCATCCTCGGCGGTATGACTGGCGTGTTCACGCTGACTATCCTGGGCGGTGGTCTGGTTTCTCCGGCATCTCCGG‑TTTTATCCTTGCTGTACTGGCGATGACACCAAAAGGTGCTTACTTCGCTAACATCGCGGGTGTGTGTGCGGCGATGGCTGTCTCCTTCGTTGTCTCTGC‑TAtttt < 2:350124/246‑1 (MQ=255) tCCTGGGGGGTATCCACGAAATCTACTTCCCGTATGTGCTGATGAATCCGCGTCTGATCCTCGCAGTCATCCTCGGCGGTATGACTGGCGTGTTCACGCTGACTATCCTGGGCGGTGGTCTGGTTTCTCCGGCATCTCCGG‑TTTTATCCTTGCTGTACTGGCGATGACACCAAAAGGTGCTTACTTCGCTAACATCGCGGGTGTGTGTGCGGCGATGGCTGTCTCCTTCGTTGTCTCTGC‑TATTTTGCt < 1:260252/249‑1 (MQ=255) ggggTATCCACGAAATCTACTTCCCGTATGTGCTGATGAATCCGCGTCTGATCCTAGCAGTCATCCTCGGCGGTATGACTGGGGTGTTCAAGCTGACTCTCCTGGGCGGGGGGCTGGGGTCTCCGGCATCTCCGG‑TTTTATCCTTGCTGGACTGGAGCTGACACCAAAAGGTGGGTACTTGGCTAACATCGCGGGGGTGTGTGAGGCGATGGGTGTCTCCTTCGGTGTCTCGGCCTATTT‑GCTGAAAAcc > 2:140975/1‑250 (MQ=255) tccacgccaTCTACTTCCCGTATGTGCTGATGAATCCGCGTCTGATCCTCGCAGTCATCCTCGGCGGTATGACTGGCGTGTTCACGCTGACTATCCTGGGCGGTGGTCTGGTTTCTCCGGCATCTCCGG‑TTTTATCCTTGCTGTACTGGCGATGACACCCAAAGGTGCTTACTTCTCTAACCTCGCGGGTGTGGGTGCGGCGCTGGCTGTCTCCTTCGTTGTCTCTGC‑TATTTTGCTGAACACCAGCaa > 2:206423/9‑249 (MQ=255) aaTCTACTTCCCGTATGTGCTGATGAATCCGCGTCTGATCCTCGCAGTCATCCTCGGCGGTATGACTGGCGTGTTCACGCTGACTATCCTGGGCGGTGGTCTGGTTTCTCCGGCCTCTCCGG‑TTTTATCCTTGCTGTACTGGCGATGACCCCAAAAGGGGCTTACTTCGCTCACATCGCGGGGGTGTGTGCGGCGATGGCTGTCTCCTTAGTTTTCTCTGC‑TATTTTGCTGAAAAACAGCAAAGGGaa > 2:386036/1‑248 (MQ=255) tCTACATCCCGAATGTGATGATGAATCCGCGTCTGATCCTCGCAGTCATCCTCGGCGGTATGACTGGCGTGTTCACGACGGCTATCCTGGGCGGTGGTCTGGTTTCTCCAGCATTTCCGGATT‑TATCCTTGCTGGACTGGGGTTAACACCACAAGGAGATTACTTCGCTAACATCGAGGGTGTGTGAGCGGCGATGGATGTTTCCTTGGTTGTCTCTGC‑TATTTTGCTGAAAACCAGCAAAGGGaaaaaat > 2:314473/1‑247 (MQ=255) aCTTCCCGGTTGTGCTGATGAATCCGCGTCTGATCCTCGCAGTCATCCTCGGCGGTATGACTGGAGTGTTCACGCTGACTATCCTGGGCTGTGGTCTGGTTTCTCCGGCATCTCCGG‑TTTTATCCTTGCTGTACTGGCGATGACACCAAAAGGTGCTTACTTCGCTAACATCGCGGGTGTGTGTGCGGCGATGGCTGTCTCCTTCGTTGTCTCTGC‑TATTTTGCTGAAAACCAGCAAAGTGAaagaagaag < 2:270734/251‑1 (MQ=255) tCCCGTAGGTGCTGATGAATCCGCGTCTGATCCGCGCAGTCATCCTCGGCGGTATGACTGGCGTGTTCACGCTGACTATCCTGGGCGGTGGTCTGGTTTCTCCGGCATCTCCGG‑TTTTATCCTTGCTGTACTGGCGATGACACCAAAAGGTGCTTACTTCGCTAACATCGCGGGTGTGTGTGCGGCGATGGCTGTCTCCTTCGTTGTCTCTGC‑TATTTTGCTGAAAACCAGCAAAGTGAaagaagaag < 2:326476/248‑1 (MQ=255) cccGTATGGGCTGATGAATCCGCGTCTGATCCTCGCAGTCATCCTCGGCGGTATGACTGGCGTGTTCACGCTGACTATCCTGGGCGGTGGTCTGGTTTCTCCGGCATCTCCGG‑TTTTATCCTTGCTGTACTGGCGATGACACCAAAAGGTGCTTACTTCGCTAACATCGCGGGTGTGTGTGCGGCGATGGCTGTCTCCTTCGTTGTCTCTGC‑TATTTTGCTGAAAACCAGCAAAGTGAAAGAAGAAgatg < 1:235357/250‑1 (MQ=255) tATGTGCTGATGAATCCGCGTCTGATCCTCGCAGTCATCCTCGGCGGTATGACTGGCGTGTTCACGCTGACTATCCTGGGCGGTGGTCTGGTTTCTCCGGCCTCTCCGG‑TTTTATCCTTGCTGTACTGGCGATGACACCAAAAGGGGCTTACTTCGCTAACATCGCGGGTGGGGGTGCGGCGATGGCTGTCTCCTTCGTTGTCTCTGC‑TATTTTTCTGAAAACCAGCAAAGTGAAAGAAGAAGATGATAtt > 2:357469/1‑251 (MQ=255) gtgCTGATGAATCCGCGTCTGATCCTCGCAGTCATCCTCGGCGGTATGACTGGCGTGTTCACGCTGACTATCCTGGGCGGTGGTCTGGTTTCTCCGGCATCTCCGG‑TTTTATCCTTGCTGTACTGGCGCTGACTCCACAAGGTGCTTTCTTCGCTCACATCGCGGGTGTGGTTGCGGCGGTGGCTGTCTCCTTCGTTGTCTCTGC‑TATTTTTCTGAAAACCAGCCAAGGGAAAGCAGAAGATGATAttta > 2:160835/1‑248 (MQ=255) atgaATCCGCGTCTGATCCTCGCAGTCATCCTCGGCGGTATGACTGGCGTGTTCACGCTGACTATCCTGGGCGGTGGTCTGGTTTCTCCGGCATCTCCGG‑TTTTATCCTTGCTGTACTGGCGATGACACCAAAAGGTGCTTACTTCGCTAACATCGCGGGTGTGTGTGCGGCGATGGCTGTCTCCTTCGTTGTCTCTGC‑TATTTTGCTGAAAACCAGCAAAGTGAAAGAAGAAGATGATATTGAagcagc > 1:428873/1‑250 (MQ=255) gaATCCGCGTCTGATCCTCGCAGTCATCCTCGGCGGTATGACTGGCGTGTTCACGCTGACTATCCTGGGCGGTGGTCTGGTTTCTCCGGCATCTCCGGGTTCTATCCTTGCTGTACTGGCGATGACACCAAAAGGTGCTTACTTCGCTAACATCGCGGGTGGGGGTGCGGCGATGGCTGTCTCCTTCGTTGTCTCTGC‑TATTTTGCTGAAAACCAGCAAAGTGAAAGAAGAAGATGATATTTAagccgaa > 2:254660/1‑246 (MQ=255) aTCCGCGTCTGATCCTCGCAGTCATCCTCGGCGGTATGACTGGCGTGTTCACGCTGACTATCCTGGGCGGTGGTCTGGTTTCTCCGGCATCTCCGG‑TTTTATCCTTGCTGTACTGGCGATGACACCAAAAGGTGCTTACTTCGCTAACATCGCGGGTGTGTGTGCGGCGATGGCTGTCTCCTTCGTTGTCTCTGC‑TATTTTGCTGAAAACCAGCAAAGTGAAAGAAGAAGATGATATTGAAGCAGCAACtc > 1:151406/1‑251 (MQ=255) gcgTCTGATCCTCGCAGTCATCCTCGGCGGTATGACTGGCGTGTTCACGCTGACTATCCTGGGCGGTGGTCTGGTTTCTCCGGCATCTCCGG‑TTTTATCCTTGCTGTACTGGCGATGACACCAAAAGGTGCTTACTTCGCTAACATCGCGGGTGTGTGTGCGGCGATGGCTGTCTCCTTCGTTGTCTCTGC‑TATTTTGCTGAAAACCAGCAAAGTGAAAGAAGAAGATGATATTGAAGCAGCAACtcgtcg < 1:323168/251‑1 (MQ=255) gTCTGATCCTCGCAGTCATCCTCGGCGGTATGACTGGCGTGTTCACGCTGAATATCCTGGGCGGTGGGCTGGTTTCTCCGGCATCTCCGG‑TTTTATCCTTGCTGTACTGGCGATGACCCCAAAAGGGGCTTACTTCGCTAACCTCACGGGGGTGTGTGCGGCGATGGGTGTATCCTTTGTTGTCTCTGC‑TTTTTTTCTGTAAACCAGACAAGGGAACGAAGAAGTGGATATTGAAACAACAAAtcgtcct > 2:343449/1‑248 (MQ=255) cTGATCCTCGCAGTCATCCTCGGCGGTATGACTGGCGTGTTCACGCTGACTATCCTGGGCGGTGGTCTGGTTTCTCCGGCATCTCCGG‑TTTTATCCTTGCTGTACTGGCGATGACACCAAAAGGTGCTTACTTCGCTAACATCGCGGGTGTGTGTGCGGCGATGGCTGTCTCCTTCGTTGTCTCTGC‑TATTTTGCTGAAAACCAGCAAAGTGAAAGAAGAAGATGATATTGAAGCAGCAACTCGTCGTATg > 1:301549/1‑251 (MQ=255) tGATCCTCGCAGTCATCCTCGGCGGTATGACTGGCGTGTTCACGCTGACTATCCTGGGCGGTGGTCTGGTTTCTCCGGCATCTCCGG‑TTTTATCCTTGCTGTACTGGCGATGACACCAAAAGGTGCTTACTTCGCTAACATCGCGGGTGTGTGTGCGGCGATGGCTGTCTCCTTCGTTGTCTCTGC‑TTTTTTGCTGAAAACCCGCCAAGTGAAAGAAGAAGATGATATTGAAGCAGCAACTCGTCGTATGc > 2:195050/1‑251 (MQ=255) cGCAGTTATCCTCGGCGGTATGACTGGCGTGGTCACGCTGACTATCCTGGGCGGTGGACTGGTTTCTCCGGCATCTCCGG‑TTTTATCCTTGCTGTACTGGCGATGACACCAAAAGGTGCTTACTTCGCTAACTTCGCGGGTGTGTGTGCGGCGATGGCTGTCTCCTTCGTTGTCTCTGC‑TATTTTGCTGAAAACCAGCAAAGTGAAAGAAGAAGATGATATTGAAGCAGCAACTCGTCTTATGCAGGACa < 2:145817/250‑1 (MQ=255) gCAGTCATCCGCGGCGGTATGACTGGCCTGTTCACGCTGACTATCCTGGGCGGTTGTCTGGTTTCTCCGGCATCTCCGG‑TTTTATCCTTGCTGTACTGGCGATGACACCAAAAGGTGCTTACTTCGCTAACATCGCGGGTGTGTGTGCGGCGATGGCTGTCTCCTTCGTTGTCTCTGC‑TATGTTGCTGAAAACCAGCAAAGTGAAAGAAGAAGATGATATTGAAGCAGCAACTCGTCGTATGCAGGACATg < 2:321322/251‑1 (MQ=255) tCATCCTCGGCGGTATGACTGGCGTGTTCACGCTGACTATCCTGGGCGGTGGTCTGGTTTCTCCGGCATCTCCGG‑TTTTATCCTTGCTGTACTGGCGATGACACCAAAAGGTGCTTACTTCGCTAACATCGCGGGTGTGTGTGCGGCGATGGCTGTCTCCTTCGTTGTCTCTGC‑TATTTTGCTGAAAACCAGCAAAGGGAAAGAAGAAGATGATATTGAAGCAGCAACTCGTCGTATGCAGGACATGaa > 1:80811/1‑249 (MQ=255) cggTATGCCTGGCGTGTTCACGCTGACTATCCTGGGCGGTGGTCTGGTTTCTCCGGCATCTCCGG‑TTTTATCCTTGCTGTACTGGCGATGACACCAAAAGGTGCTTACTTCGCTAACATCGCGGGTGTGTGTGCGGCGATGGCTGTCTCCTTCGTTGTCTCTGC‑TATTTTGCTGAAAACCAGCAAAGTGAAAGAAGAAGATGATATTGAAGCAGCAACTCGTCGTATGCAGGACATGAAAGCTGAGTCTa > 2:386624/1‑250 (MQ=255) cTGGCGTGTTCACGCTGACTATCCTGGGCGGTGGTCTGGTTTCTCCGGCATCTCCGG‑TTTTATCCTTGCTGTACTGGCGATGACACCAAAAGGTGCTTACTTCGCTAACATCGCGGGTGTGTGTGCGGCGATGGCTGTCTCCTTCGTTGTCTCTGC‑TATTTTGCTGAAAACCAGCAAAGTGAAAGAAGAAGATGATATTGAAGCAGCAACTCGTCGTATGCAGGACATGAAAGCTGAGTCTAAAGGCGCAt > 2:330085/1‑251 (MQ=255) cGTGTTCACGCTGACTATCCTGGGCGGTGGTCTGGTTTCTCCGGCATCTCCGG‑TTTTATCCTTGCTGTACTGGCGATGACACCAAAAGGTGCTTACTTCGCTAACATCGCGGGTGTGTGTGCGGCGATGGCTGTCTCCTTCGTTGTCTCTGC‑TATTTTGCTGAAAACCAGCAAAGTGAAAGAAGAAGATGATATTGAAGCAGCAACTCGTCGTATGCAGGACATGAAAGCTGAGTCTAAAGGCGCATCTcc > 1:247379/1‑251 (MQ=255) cGTGTTCACGCTGACTATCCTGGGCGGTGGTCTGGTTTCTCAGGCATCTCCGG‑TTTTATCCTTGCTGTACTGGCGATGACACCAAAAGGTGCTTACTTCGCTAACATCGCGGGTGTGTGTGCGGCGATGGCTGTCTCCTTCGTTGTATCTGC‑TATTTTGCTGCAAACAAGCAAAGTGAAAGAAGAAGATGATATTGAAGCAGCAACTCGTCGTATGCTGGACATGCAAGCTGAGTCTAAAGGCGCATCTcc > 2:350827/1‑251 (MQ=255) ttCACGCTGAGTATCCGGGGCGGTGGTCTGGCTTCTCCGGCATCTC‑AGGTTTTATCCTTGCTGTACTGGCGCTGACACCCCAAGGTGCTTACTTCGCTAACATCGCGGGTGTGTGTGCGGCGATGGCTGTCTCCTTCGTTGTCTCTGC‑TATTTTGCTGACAACCAGCAAAGTGAAGGTAGAAGTTGATATTGACGCCGCAACTCGGCGTATGCAGGACTTGAAAGCTGAGTCTAAAGGCGCATCTCCGCTg > 2:45347/1‑251 (MQ=255) cACGCTGACTATCCGGTGCGGTTGTCTGGTTTCTCCGGCATCTCCGG‑TTTTATCCTTGCTGTACTGGCGATGACACCAAAAGTTGCTTACTTCGCTAACATCGCGGGTTTGTGTGCTGCGATGGCTGTCTCCTTCGTTGTCTCTGC‑TATTTTGCTGAAAACCAGCAAAGTGAAAGAAGAAGATGATATTGAAGCAGCAACTCGTCGTATGCAGGACATGAAAGCTGAGTCTAAAGGCGCATCTCCGCTGt < 1:103497/250‑1 (MQ=255) tATCCTGGGCGGTGGTCTGGTTTCTCCGGCATCTCCGG‑TTTTATCCTTGCTGTACTGGCGATGACACCAAAAGGTGCTTACTTCGCTAACATCGCGGGTGTGTGTGCGGCGATGGCTGTCTCCTTCGTTGTCTCTGC‑TATTTTGCTGAAAACCAGCAAAGTGAAAGAAGAAGATGATATTGAAGCAGCAACTCGTCGTATGCAGGACATGAAAGCTGAGTCTAAAGGCGCATCTCCGCTGTATGCTGGCg > 1:403138/1‑250 (MQ=255) ctgggaagtggaCTGGTTTCTCCGGCATCTCCGG‑TTTTATCCTTGCAGTAATGGCGATGCCACCAAACGGTGCTTACTTCGCTAACATCGCGGGTGTGAGTGCGGCGATGGATGTCTCCTTCGTTGTCTCTGC‑TATTTTGCTGAAAACCAGCAAAGTGAACGAAGCAGATTATATTGAAGCAGCAACTCGTCGTATGCAGGCCATGAAAGCTGAGTCTAAAGGCGCATCTCCGCTGTCTGCTGGCGAtg > 2:310865/8‑249 (MQ=255) tGGGCGGTGGTCTGGTTTCTCCGGCATTTCCGG‑TTTTATCCTTGCTGTACTGGCGATGACACCAAAAGGTGCTTACTTCGCTAACATCGCGGGTGTGTGTGCGGCGATGGCTGTCTCCTTCGTTGTCTCTGC‑TATTTTGCTGAAAACCAGCAAAGTGAAAGAAGAAGATGATATTGAAGCAGCAACTCGTCGTATGCAGGACATGAAAGCTGAGTCTAAAGGCGCATCTCCGCTGTCTGCTGGCGAtgtg > 1:349436/1‑250 (MQ=255) gtggtCTGGTTTCTCCGGCATATCCGG‑TTTTATCCTTGCTGTACTGGCGATGACACCACAAGGCGCTTACTTCGCTAACATCGCGGGTGTGTGTGCGGCGATGGCTGTCTCCTTCGTTGTCTCTGC‑TATTTTGCTGAAAACCAGCAAAGTGAAAGAAGAAGATGATATTGAAGCAGCAACTCGTCGTATGCCGGACATGAAAGCTGAGTCTAAAGGCGCCTCTCCGCTGGCTGCTGGCGCTGGGGCTAACg > 2:82856/1‑251 (MQ=255) tCTGGTTTCTCCGGCATCTCCGG‑TTTTATCCTTGCTGTACTGGCGATGACACCAAAAGGTGCTTACTTCGCTAACATCGCGGGTGTGTGTGCGGCGATGGCTGTCTCCTTCGTTGTCTCTGC‑TATTTTGCTGAAAACCAGCAAAGTGAAAGAAGAAGATGATATTGAAGCAGCAACTCGTCGTATGCAGGACATGAAAGCTGAGTCTAAAGGCGCATCTCCGCTGTCTGCTGGCGATGTGACTAACGACCt > 1:216372/1‑251 (MQ=255) cTGGTTTCTCCGGCATCTCCGG‑TTTTATCCTTGCTGTACTGGCGATGACACCAAAAGGTGCTTACTTCGCTAACATCGCGGGTGTGTGTGCGGCGATGGCTGTCTCCTTCGTTGTCTCTGC‑TATTTTGCTGAAAACCAGCAAAGTGAAAGAAGAAGATGATATTGAAGCAGCAACTCGTCGTATGCAGGACATGAAAGCTGAGTCTAAAGGCGCAt > 1:13275/1‑216 (MQ=255) cTGGTTTCTCCGGCATCTCCGG‑TTTTATCCTTGCTGTACTGGCGATGACACCAAAAGGTGCTTACGTCGCTAACATCGCGGGTGTGTGTGCGGCGATGGCTGTCGCCTTCGTTGTCTCTGC‑TATTTTGCTGAAAACCAGCAAAGTGAAAGAAGAAGATGATATTGAAGCAGCAACTCGTCGTATGCAGGACATGAAAGCTGAGTCTAAAGGCGCAt < 2:13275/216‑1 (MQ=255) ctcCGGCATCTCCGG‑TTTTATCCTTGCTGTACTGGCGATGACACCAAAAGGTGCTTACTTCGCTAACATCGCGGGTGTGTGTGCGGCGATGGCTGTCTCCTTCGTTGTCTCTGC‑TATTTTGCTGAAAACCAGCAAAGTGAAAGAAGAAGATGATATTGAAGCAGCAACTCGTCGTATGCAGGACATGAAAGCTGAGTCTAAAGGCGCATCTCCGCTGTCTGCTGGCGATGTGACTAACGACCt < 1:274804/243‑1 (MQ=255) ctcCGGCATCTCCGG‑TTTTATACTTGCTGTACTGGCGATGACACCAAACGGTGCTTACTTCGCTAACATCGCGGGTGTGTGTGCGGCGATGGCTGTCTCCTTCGTTGTCTCTGC‑TATTTTGCTGAAAACCAGCAAAGTGAAAGAAGAAGATGATATTGAAGCAGCAACTCGTCGTATGCAGGACATGAAAGCTGAGTCTAAAGGCGCATCTCCGCTGTCTGCTGGCGATGTGACTAACGACCt > 2:274804/1‑243 (MQ=255) cGGCATCTCCGG‑TTTTATCCTTGCTGTACTGGCGATGACACCAAAAGGTGCTTACTTCGCTAACATCGCGGGTGTGTGTGCGGCGATGGCTGTCTCCTTCGTTGTCTCTGC‑TATTTTGCTGAAAACCAGCAAAGTGAAAGAAGAAGATGATATTGAAGCAGCAACTCGTCGTATGCAGGACATGAAAGCTGAGTCTAAAGGCGCATCTCCGCTGTCTGCTGGCGATGTGACTAACGACCTGAGCCacgtac > 1:148931/1‑251 (MQ=255) tccggTTTTATCCTTGCTGTACTGGCGATGACACCAAAAGGTGCTTACTTCGCTAACATCGCGGGTGTGTGTGCGGCGATGGCTGTCTCCTTCGTTGTCTCTGC‑TATTTTGCTGAAAACCAGCAAAGTGCAAGAAGAAGATGATATTGAAGCAGCAACTCGTCGTATGCAGGACATGAAAGCTGAGTCTAAAGGCGCATCTCCGCTGTCTGCTGGCGATGTGACTAACGACCTGAGCCACGTACGTAAAat > 1:80641/4‑251 (MQ=255) ccggTTTTATCCTTGCTGTTCTGGCGATGACACCAAAAGTTGCTTACTTCGCTAACATCGCGGGTGTGTGTGCGGCGATGGCTGTCTCCTTCGTTGTCTCTGC‑TATTTTGCTGAAAACCAGCAAAGTGAAAGAAGAAGATGATATTGAAGCAGCAACTCGTCGTATGCAGGACATGAAAGCTGAGTCTAAAGGCGCATCTCCGCTGTCTGCTGGCGATGTGACTAACGACCTGAGCCACGTACGTaaaa < 2:368273/247‑1 (MQ=255) ccggTTTTATCCTTGCTGTACTGGCGATGACACCAAAAGGTGCTTACTTCGCTAACATCGCGGGTGTGTGTGCGGCGATGGCTGTCTCCTTCGTTGTCTCTGC‑TATTTTGCTGGAAACCAGCAAAGTGAAAGAAGAAGATGATATTGAAGCAGCAACTCGTCGTATGCAGGACATGAAAGCTGAGTCTAAAGGCGCATCTCCGCTGTCTGCTGGCGATGTGACTAACGACCTGAGCCACGTACGTaaa < 1:461946/246‑1 (MQ=255) ccggTTTTATCCTTGCTGTACTGGCGATGACACCAAAAGGTGCTTACTTCGCTAACATCGCGGGTGTGTGTGCGGCGATGGCTGTCTCCTTCGTTGTCTCTGC‑TATTTTGCTGAAAACCAGCAAAGTGAAAGAAGAAGATGATATTGAAGCAGCAACTCGTCGTATGCAGGACATGAAAGCTGAGTCTAAAGGCGCATCTCCGCTGTCTGCTGGCGATGTGACTAACGACCTGAGCCACGTACGTaaa < 1:386036/246‑1 (MQ=255) ccggTTTTATCCTTGCTGTACTGGCGATGACACCAAAAGGTGCTTACTTCGCTAACATCGCGGGTGTGTGTGCGGCGATGGCTGTCTCCTTCGTTGTCTCTGC‑TATTTTGCTGAAAACCAGCAAAGTGAAAGAAGAAGATGATATTGAAGCAGCAACTCGTCGTATGCAGGACATGAAAGCTGAGTCTAAAGGCGCATCTCCGCTGTCTGCTGGCGATGTGACTAACGACCTGAGCCACGTACGTaa < 1:330085/245‑1 (MQ=255) ccggTTTTATCCTTGCTGTACTGGCGATGACACCAAAAGGTGCTTACTTCGCTAACATCGCGGGTGTGTGTGCGGCGATGGCTGTCTCCTTCGTTGTCTCTGC‑TATTTTGCTGAAAACCAGCAAAGTGAAAGAAGAAGATGATATTGAAGCAGCAACTCGTCGTATGCAGGACATGAAAGCTGAGTCTAAAGGCGCATCTCCGCTGTCTGCTGGCGATGTGACTAACGACCTGAGCCACGTACGTAAAat < 1:372819/248‑1 (MQ=255) cggTTTTATCCTTGCTGTACTGGCGATGACACCAAAAGGTGCTTACTTCGCTAACATCGCGGGTGTGTGTGCGGCGATGGCTGTCTCCTTCGTTGTCTCTGC‑TATTTTGCTGAAAACCAGCAAAGTGAAAGAAGAAGATGATATTGAAGCAGCAACTCGTCGTATGCAGGACATGAAAGCTGAGTCTAAAGGCGCATCTCCGCTGTCTGCTGGCGATGTGACTAACGACCTGAGCCACGTACGTAAAatc > 1:175895/2‑250 (MQ=255) | CCCAGGTCCAGGTATGGGCGTGCTGCTGGCGTACATGTTCTTTGGTCGTGGTAGCGCTAAACAGTCTGCGGGCGGTGCGGCAATCATCCACTTCCTGGGGGGTATCCACGAAATCTACTTCCCGTATGTGCTGATGAATCCGCGTCTGATCCTCGCAGTCATCCTCGGCGGTATGACTGGCGTGTTCACGCTGACTATCCTGGGCGGTGGTCTGGTTTCTCCGGCATCTCCGGGTTCTATCCTTGCTGTACTGGCGATGACACCAAAAGGTGCTTACTTCGCTAACATCGCGGGTGTGTGTGCGGCGATGGCTGTCTCCTTCGTTGTCTCTGC‑TATTTTGCTGAAAACCAGCAAAGTGAAAGAAGAAGATGATATTGAAGCAGCAACTCGTCGTATGCAGGACATGAAAGCTGAGTCTAAAGGCGCATCTCCGCTGTCTGCTGGCGATGTGACTAACGACCTGAGCCACGTACGTAAAATC > NC_000913/3772940‑3773420 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |