| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,279,276 | C→G | F121L (TTC→TTG) | kbaZ → | putative tagatose‑1,6‑bisphosphate aldolase 1 chaperone |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,279,276 | 0 | C | G | 95.0% | 55.9 / ‑6.1 | 21 | F121L (TTC→TTG) | kbaZ | putative tagatose‑1,6‑bisphosphate aldolase 1 chaperone |
| Reads supporting (aligned to +/- strand): ref base C (1/0); major base G (12/7); minor base T (1/0); total (14/7) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.79e-01 | |||||||||||
GCCGTTACTGATTGAAGCAACCTCCAATCAGGTAGACCAGTTCGGCGGTTATACCGGAATG‑ACGCCCGCCGATTTTCGCGGCTTTGTTTGTCAGCTCGCCGACTCGTTGAATTTCCCGCAGGATGCGTTGATTCTGGGTGGTGACCATCTGGGGCCAAACCGCTGGCAAAACCTGCCGGCCGCTCAGGCAATGGCCAATGCCGATGATTTGATTAAAAGCTACGTTGCGGCAGGATTCAAAAAAATCCACCTTGATTGCAGCATGTCCTGTCAGGACGATCCGATTCCCTTAACTGATGACATCGTGGCTGAACGCGCCGCCCGTCTGGCGAAAGTGGCGGAAGAAACCTGTCTTGAACACTTTGGCGAAGCCGATCTGGAGTATGTC‑ATTGGTACCGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGGATGCCGCCCGCG > NC_000913/3279039‑3279508 | gCCGTTACTGATTGAAGCAACCTCCAATCAGGTAGACCAGTTCGGCGGTTATACCGGAATG‑ACGCCCGCCGATTTTCGCGGCTTTGTTTGTCAGCTCGCCGACTCGTTGAATTTCCCGCAGGATGCGTTGATTCTGGGGGGGGACCATCTGGGGCCAAACCGCTGGCAAAACCTGCCGGCCGCTCAGGCAATGGCCAAAGCCGATGATTTGATTAAAAGCTACGTTGCGGCAGGGTTGAAAAAAATcccac > 1:230077/1‑248 (MQ=255) aaTCAGGTAGCCCAGTCCGGCGGTTATACCGAAATG‑ACGCCCGCCGATTTTCGCGGCTTTGTTTGTCAGCTCGCCGACTCGTTGAATTTCCCGCAGGATGCGTTGATTCTGGGTGGTGACCATCTGGGGCCAAACCGCTGGCAAAACCTGCCGGCCGCTCAGGCAATGGCCAATGCCGATGATTTGATTAAAAGCTACGTTGCGGCAGGATTGAAAAAAATCCACCTTGATTGCAGCATGTCCTGTCAGGa < 1:64813/251‑1 (MQ=255) acagttAGACCAGTTCGGGTGTTATACCGAAATG‑ACGCCCGCCGATTTTCGCGTCTTTGTTTGTCAGCTCGCCGACTCGTTGAATTTCCCGCAGGATGCGGTGATTCTGGGTGGTGACCATCTGGGGCCAAGCCGCTGGCAAAACCTGCCGGCCGCTCAGGCATTTGCCAATTCCGATGATTTGATTAAAATCTACGTTGCGGCAGGATTGAAAAAAATCCACCTTGATTGCAGCATGTCCTGTCAGGACg < 1:129182/246‑1 (MQ=255) agttAGACCAGTGCGGGGGTTATACCG‑AATGGACGCCCGCCGATTTTCGCGGCTTTGTTTGTCAGCTCGCCGACTCGTTGAATTTCCCGCAGGATGCGTTGATTCTGGGTGGTGACCATCTGGGGCCAAACCGCTGGCAAAACCTGCCGGCCGCTCAGGCAATGGCCAATGCCGATGATTTGATTAAAAGCTACGTTGCGGCAGGATTGAAAAAAATCCACCTTGATTGCAGCATGTCCTGTCAGGACGAt < 1:209689/248‑1 (MQ=255) ccAGTTCGGCGGTTATACCGGAATG‑ACGCCCGCCGATTTTCGCGGCTTTGTTTGTCAGCTCGCCGACTCGTTGAATTTCCCGCAGGATGCGTTGATTCTGGGTGGGGACCATCTGGGGCCAAACCGCTGGCAAAACCTGCCGGCCGCTCAGGCAATGGCCAATGCCGATGATTTGATTAAAAGCTACGTTGCGGCAGGATTTAAAAAAATCCACCTTGATTTCAGCCTGTCCTGTCAGGACGGTCCGAttt > 1:129735/1‑250 (MQ=255) acgaccgccgATTTTCGCGGCTTTGTTTGTCAGCTCGCCGACTCGTTGAATTTCCCGCAGGATGCGTTGATTCTGGGTGGTGACCATCTGGGGCCCAACCGCTGGCAAAACCTGCCGGCCGCTCAGGCAATGGCCAATGCCGATGATTTGATTAAAAGCTACGTTGCGGCAGGATTGCAAAAAATCCCACTTGATTGCAGCATGTCCTGTCCGGACGCTGCACATCCCTTAACTGATGACAACCTGGCTg > 2:202216/5‑250 (MQ=255) ccgccgATTTTCGCGGCTTTGTTTGTCAGCTCGCCGACTCGTTGAATTTCCCGCAGGATGCGTTGATTCTGGGTGGTGACCATCTGGGGCCAAACCGCTGGCAAAACCTGCCGGCCGCTCAGGCAATGGCCAATGCCGATGATTTGATTAAAAGCTACGTTGCGGCAGGATTGAAAAAAATCCACCTTGATTGCAGCATGTCCTGTCAGGACGATCCGATTCCCTTAACTGATGACAGCGTGGCTGAAcgc < 1:230611/251‑1 (MQ=255) gCTCGCCGACTCGTTGAATTTCCCGCAGGATGCGTTGATTCTGGGTGGTGACCATCTGGGGCCAAACCGCTGGCAAAACCTGCCGGCCGCTCAGGCAATGGCCAATGCCGATGATTTGATTAAAAGCTACGTTGCGGCAGGATTGAAAAAAATCCACCTTGATTGCAGCATGTCCTGTCAGGACGATCCGATTCCCTTAACTGATGACATCGTGGCTGAACGCGCCGCCCGTCTGGCGAAAGTGGCGga > 1:245132/1‑249 (MQ=255) gTTGAATTTCCCGCAGGATGCGTTGATTCTGGGTGGTGACCATCTGGGGCCAAACCGCTGGCAAAACCTGCCGGCCGCTCAGGCAATGGCCACTGCCGATGATTTGATTAAAAGCTACGTTGCGGCAGGATTGAAAAAAATCCACCTTGATTGCAGAATGTCCTGTCAGGACGATCCGATTCCCTTAACTGATGACATCGTGGCTGAACGCGCCGCCCGTCTGGCGAAAGTGGCGGAAGAAAACTGTCTTg > 1:177491/1‑251 (MQ=255) gATGCGTTGATTCTGGGTGGTGACCATCTGGGGCCAAACCGCTGGCAAAACCTGCCGGCCGCTCAGGCAATGGCCAATGCCGATGATTTGATTAAAAGCTACGTTGCGGCAGGATTGAAAAAAATCCACCTTGATTGCAGCATGTCCTGTCAGGACGATCCGATTCCCTTAACTGATGACATCGTGGCTGAACGCGCCGCCCGTCTGGCGAAAGTGGCGGAAGAAACCTGTCTTTAACACTTTGGCGAAGc > 1:195565/1‑251 (MQ=255) gATTCTGGGTGGTGCCCATCTGGGGCCAAACCGCTGGCAAAACCTGCCGGCCGCTCAGGCAATGGCCAATGCCGATGATTTGATTAAAAGCTACGTTGCGGCAGGATTGAAAAAAATCCACCTTGATTGCAGCATGTCCTGTCAGGACGATCCGATTCCCTTAACTGATGACATCGTGGCTGAACGCGCCGCCCGTCTGGCGAAAGTGGCGGCAGAAACCTGTCTTGAACACTTTGGCGAAGCCGGTCTgg > 1:206557/1‑251 (MQ=255) aCCATCTGGGGCCAAACCGCTGGCAAAACCTGCCGGCCGCTCAGGCAATGGCCAATGCCGATGATTTGATTAAAAGCTACGTTGCGGCAGGATTGAAAAAAATCCACCTTGATTGCAGCATGTCCTGTCAGGACGATCCGATTCCCTTAACTGATGACATCGTGGCTGAACGCGCCGCCCGTCTGGCGAAAGTGGCGGAAGAAACCTGTCTTGAACACTTTGGCGAAGCCGATCTGGAGTATGTC‑ATTGGt < 2:195565/251‑1 (MQ=255) cGCTGGCAAAACCTGCCGGCCGCTCAGGCAATGGCCAATGCCGATGATTTGATTAAAAGCTACGTTGCGGCAGGATTGAAAAAAATCCACCTTGATTGCAGCATGTCCTGTCAGGACGATCCGATTCCCTTAACTGATGACATCGTGGCTGAACGCGCCGCCCGTCTGGCGAAAGTGGCGGAAAAAACCTGTCTTGAACACTTTTGCGCAACCGATCTGGAGTATGTC‑TTTGGTACCGaaagtcccgtacc > 1:142540/1‑240 (MQ=255) aaaaCCTGCCGGCCGCTCAGGCAATGGCAAATGCCGATGATTTGATTAAAAGCTACGTTGCGGCAGGATTGAAAAAAATCCACCTTGATTGCAGCATGTCCTGTCAGGACGATCCGATTCCCTTAACTGATGACATCGTGGCTGAACGCGCCGCCCGTCTGGCGAAAGGGGCGGCAGAAACCTGTCTTGAACAATTTGGCGGAGCCGATCTGGAGTATGTCCATTG‑TACCGAAGTGCCGGTaaccgggggg > 1:209160/1‑242 (MQ=255) gccgcgctggctactgCCAATGCCGATGTTTTGATTAAAATTGATGTTGCGGCAGGATTGAAAATAATACGTCTTGATTTCAGCATGTCCTGTCATGACGATCTGATCTCCTCTACTGATGACAGCGTGGCTGAACGCGCCGCCCGTCTGGCGAAATTGGCGGAAGAACCCTGTCTTGATCACTTTGGCGACGCCGATCTTGAGGAGGTC‑ATTGGTCGAGAAGTGCCGGTTCCTGGCTGCGCGCATGaacc < 2:96810/236‑3 (MQ=255) gatttgattAAAAGCTACGTTGCGGCAGGATTGAAAAAAATCCACCTTGATTGCAGCATGTCCTGTCAGGACGATCCGATTCCCTTAACTGATGACATCGTGGCTGAACGCGCCGCCCGTCTGGCGAAAGTGGCGGAAGAAACCTGTCTTGAACACTTTGGCGAAGCCGATCTGGAGTATGTC‑ATTGGTACCGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGcc > 1:255035/1‑251 (MQ=255) tttgattAAAAGCTACGTTGCGGCAGGATTGAAAAAAATCCACCTTGATTGCAGCATGTCCTGTCAGGACGATCCGATTCCCTTAACTGATGACATCGTGGCTGAACGCGCCGCCCGTCTGGCGAAAGTGGCGGAAGGAACCTGTCTTGGACACTTTTGCGAAGCCGAACTGGGGGGTGTC‑ATTTGTACCGAAGTGCCCGGGCCTGGCGGCGGGCCTGAAACCCTaaacgcgggaacgggacggcggcgtg > 2:236014/1‑227 (MQ=255) tttgattAAAAGCTACGTTGCGGCAGGATTGAAAAAAATCCACCTTGATTGCAGCATGTCCTGTCAGGACGATCCGATTCCCTTAACTGATGACATCGTGGCTGAACGCGCCGCCCGTCTGGCGAAAGTGGCGGAAGAAACCTGTCTTGAACACTTTGGCGAAGCCGATCTGGAGTATGTC‑ATTGGTACCGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAg < 1:236014/232‑1 (MQ=255) tAAAAGCTACGTTGCGGCAGGATTGAAAAAAATCCACCTTGATTGCAGCATGTCCTGTCAGGACGATCCGATTCCCTTAACTGATGACATCGTGGCTGAACGCGCCGCCCGTCTGGCGAAAGTGGCGGGAGAAACCTGTCTTGGACACCTTTGCGAAGACGATCTGGAGGCTGTC‑AATGGTACCGGAATGCCGGTACCTGGCGGCGCGCCTGAAACCTTAAACGAGTTggtggggaccacacccgcgtgtg > 2:58429/1‑230 (MQ=255) cTACGTTGCGGCAGGATTGAAAAAAATCCACCTTGATTGCAGCATGTCCTGTCAGGACGATCCGATTCCCTTAACTGATGACATCGTGGCTGAACGCGCCGCCCGTCTGGCGAAAGTGGCGGAAGAAACCTGTCTTGAACATTTTGGCGAAGCCGATCTGGGGTATGTC‑ATTGGTACCGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCCCCACGCCGGGTGCCGCCcgcg > 1:36625/1‑251 (MQ=255) cTACGTTGCGGCAGGATTCAAAAAAATCCACCTTGATTGCAGCATGTCCTGTCAGGACGATCCGATTCCCTTAACTGATGACATCGTGGCTGAACGCGCCGCCCGTCTGGCGAAAGTGGCGGAAGAAACCTGTCTTGAACACTTTTGCGAAGCCGATCTGGAGTATGTC‑ATTGGTACCGAAGTGCCGGTACCTGGCGGCTCGCATGAAACCTTTAGCGAGCTGGCGGTCACCCCGCCgggttccccccgcc > 1:101479/1‑239 (MQ=255) | GCCGTTACTGATTGAAGCAACCTCCAATCAGGTAGACCAGTTCGGCGGTTATACCGGAATG‑ACGCCCGCCGATTTTCGCGGCTTTGTTTGTCAGCTCGCCGACTCGTTGAATTTCCCGCAGGATGCGTTGATTCTGGGTGGTGACCATCTGGGGCCAAACCGCTGGCAAAACCTGCCGGCCGCTCAGGCAATGGCCAATGCCGATGATTTGATTAAAAGCTACGTTGCGGCAGGATTCAAAAAAATCCACCTTGATTGCAGCATGTCCTGTCAGGACGATCCGATTCCCTTAACTGATGACATCGTGGCTGAACGCGCCGCCCGTCTGGCGAAAGTGGCGGAAGAAACCTGTCTTGAACACTTTGGCGAAGCCGATCTGGAGTATGTC‑ATTGGTACCGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGGATGCCGCCCGCG > NC_000913/3279039‑3279508 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |