New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2818058 =	16 (0.630)	6 (0.260)	5/446	1.9	23.2%	intergenic (‑198/+1)	argQ/argZ	tRNA‑Arg/tRNA‑Arg
	?	NC_000913	= 2818337	25 (1.060)					intergenic (‑63/+136)	argY/argV	tRNA‑Arg/tRNA‑Arg

GTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAATTTATTTTACTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCGGTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAAAGTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATTCGAACCCCGGATGCAG  >  NC_000913/2818108‑2818587                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                           gtcctctatcCAGCTGATCTACGGATGCAGCGGGAAATTTATTTTACGGCTTATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAATTTATTTTACTGCTGATATT‑‑GATACCGCTACTAAAGCCATATCAAGTAAGAGatggtgcatccgggaggattcga                                                                                                                                                                                                                                     >  1:276917‑M2/4‑228 (MQ=255)                                     atttatttTACTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGACCCTCCGACCGCTCGCCTCGTAGCCGAGTACTCTATCAAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCTGATTTTTTGATACCGCTACTAATGCCGTATCAAGTAAGAGATAGTGCATCAGGGGAGATTACTCGCCTTGCGTCTATCCCTTCGGGCCGtgcataa                                                                                                                                                                                                    >  1:226005/1‑244 (MQ=37)                                       tttttttACTGTTGATATTGATACCACTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAg                                                                                                                                                                                                  <  1:167960/247‑1 (MQ=255)                                                            aaCCGCTACGAAAGCCATATCAAGTAAAAGAGGGTGCATCCGGGAGGATCCGAACCTCCTACCGCTCGGTTCGTAGCCCAGTACTCTATCCAGCTGAGCTACGGATCCATAGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGcc                                                                                                                                                                            <  1:218422/250‑1 (MQ=18)                                                              ccGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCACCTTGCGGCTCGCCCCTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTg                                                                                                                                                                          >  1:65226/1‑251 (MQ=255)                                                                                    tAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCCTCGGGCCGTTGCTTAAGCAACGTTATCCTCCCCGGTGCCTGAGGttttttacgcccccccttc                                                                                                                                                    >  2:52299/1‑234 (MQ=17)                                                                                       aagaTGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCGGTTATTACCGCCACCTCTTCCAt                                                                                                                                                 <  1:141859/250‑1 (MQ=255)                                                                                        ggaTGGTGCCTCTGGGGTGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTTCTCTATCCAGCGGAGCTACGGATGCATCGGGAAACTTTCTTTTCTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCGGTTATTACCGCCACCTCTTCCATa                                                                                                                                                <  2:225510/250‑1 (MQ=18)                                                                                             gggagtCCGGGGGGATTCGAACCTCTGACCCCTCGTTGCGTAGACGAGAACTCTAGCCAGCGGAGCTACGGATTCATCGGGAAACTTACTTTTCTGATGAGTTATTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTAGCCTCCCTGGTGCCTGCGGTTATTACCGCCACCTCTTCCATACCTTc                                                                                                                                           <  2:113904/246‑1 (MQ=17)                                                                                                     gggAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTTAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCACCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAACAACGTTATCCTCCCTGGTGCCTGCGGTTATTACCGCCACCCCTTCCATACCTTCATCGCTg                                                                                                                                    >  1:158179/1‑250 (MQ=255)                                                                                                                        aCCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCGGTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAAAGTACGTAGAATATGGTg                                                                                                                <  1:52299/251‑1 (MQ=255)                                                                                                                            cccGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCCTCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCGGTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAAAGTACGTAGAATATGGTGCATc                                                                                                            <  1:97610/249‑1 (MQ=255)                                                                                                                              cgggtCGTAGCCGATTACTCATTCCAGCTGAGCCACGGAGGCCTCGGGAATCTTCCTTTACTGAGGATTTTTTGAACCCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCACCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCGGTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAAAGTACGTAGAATATGGTGCATcc                                                                                                           <  2:65226/246‑1 (MQ=21)                                                                                                                                 ttCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATAGGGAAACTTACTTTACTGCCGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGCGATGGTGCATCCGGGCGGCTTACTCGCCTTGCGGCTCGCCCTTAGGGCCGTTGGTTAAGCCAAGGTAGTCTCCCTGGTGCCTGGCGTTGTTACCGGCCCCCCTTCCCTCACTTACTGCCTGAAAGTACGTAGACTATGGtagcccccggg                                                                                                       >  2:136433/1‑241 (MQ=9)                                                                                                                                   cGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCGGTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAAAGTACGTAGAATATGGTGCATCCGggagg                                                                                                     <  1:127746/251‑1 (MQ=255)                                                                                                                                                   taccagctgtgcgacggattgaaggggAAACGTATTTTACTGCAAATTTTTTAATACCGCTACAAAAGCCTTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGGGCCTGCGGTTATTACCGCAACCTCTTCCATACCTTCATCGCTGAAAGTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGAc                                                                                      <  1:183961/226‑1 (MQ=17)                                                                                                                                                             gCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCGGTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAAAGTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCg                                                                           >  1:4705/1‑251 (MQ=255)                                                                                                                                                                  ggATGCATCGGGAAACTTACTTTGCTGCATATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCGGTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAAAGTACGTAGAATATGGTGCATCCGGGAGGATTc                                                                                                 <  2:246268/224‑1 (MQ=255)                                                                                                                                                                  ggATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCGGTTATTACCGCCCCCTCTTCCATACCTTCATCGCTGAAAGTACGTAGAATATGGTGCATCCGGGAGGATTc                                                                                                 >  1:246268/1‑224 (MQ=255)                                                                                                                                                                      gCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTACAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGGCGATGGTAAAGCAACGGTATCCTCACTGGTGCCTGAGGTTCTTAACGCCACCACTTCCATACCTTCATAGCTGTAAGAACGTAGCAACTGGGGCATCCCGGAGGAATCGCACCTCCGAACCCTCgggtagcatccgagg                                                                  >  1:256868/1‑238 (MQ=16)                                                                                                                                                                                  ttactttactGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCGGGTATTACCGCCACCTCTTCCATACCTTCATCGCTGAAAGTACGTAGAATATGGGGCATCCGGGAGGATTCGAAACTCCGACCGCTCGGTTCGTAACCGAGTACTCTATCCAGc                                                      >  1:180663/1‑251 (MQ=255)                                                                                                                                                                                           actgctgatattgataccgctaCTAAAGCAAGATCAAGTAAGAGatggtgcatccgggaggattcgaacctccgaccgctcggttcgtagccgagtactctatccagctgagctacggatgcatcgggaaatttattttactgctgatattgataccgctactaaagccatatcaagtaagagatggtgcatccgggaggattcgaacctccgaccgctcggttcgtagccgagtactctatccagctga                                              >  1:241470‑M2/11‑44 (MQ=255)                                                                                                                                                                                                 gatattgataCCGCTACTAAAGCCATATCAAGTAAGAGatggtgcatccgggaggattcgaacctccgaccgctcggttcgtagccgagtactctatccagctgagctacggatgcatcgggaaatttattttactgctgatattgataccgctactaaagccatatcaagtaagagatggtgcatccgggaggattcgaacctccgaccgctcggttcgtagccgagtactctatccagctgtgctacgg                                       <  1:113904‑M2/247‑214 (MQ=255)                                                                                                                                                                                                   ttttGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTTAAGCAACGTTATCCTCCCCGGTGCCTGCGGTTATTCACGCCCCCTCTTCCCTACCTTCCTCGCTGTCAGTACGTAGAATATGGGGCATCCTGGAGGATTCGGACCCCCTGCCGCTCGGTTAGTAGACGGGTACTCTATCCaacctagcttcgagtgc                                        >  2:82121/1‑232 (MQ=17)                                                                                                                                                                                                    attgATTCCGCTACTAAAGCAATATCAAGTAAGAGatggtgcatccgggaggattcgaacctccgaccgctcggttcgtagccgagtactctatccagctgagctacggatgcatcgggaaatttattttactgctgatattgataccgctactaaagccatatcaagtaagagatggtgcatccgggaggattcgaacctccgaccgctcggttcgtagccgagtactctatccagctgagctacggat                                     >  1:274727‑M2/2‑35 (MQ=255)                                                                                                                                                                                                               tactaAAGCCATATCAAGTAAGAGatggtgcatccgggaggattcgaacctccgaccgctcggttcgtagccgagtactctatccagctgagctacggatgcatcgggaaatttattttactgctgatattgataccgctactaaagccatatcaagtaagagatggtgcatccgggaggattcgaacctccgaccgctcggttcgtagccgagtactctatccagctgagctacggatgcatcgggaaac                         <  1:225510‑M2/251‑228 (MQ=255)                                                                                                                                                                                                                           aTCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCGGTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAAAGTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATTCGaa              <  1:82121/250‑1 (MQ=255)                                                                                                                                                                                                                                gTAAGAGatggtgcatccgggaggattcgaacctccgaccgctcggttcgtagccgagtactctatccagctgagctacggatgcatcgggaaatttattttactgctgatattcataccgctactaaagccatatcaagtaagagatggggcatacgggaggattcgacgctccgacagctcggctcgtcgccgagtactctatacagctgagctacggatgaatcgggaggcttgctctactgcagatt        <  1:128138‑M2/251‑245 (MQ=255)                                                                                                                                                                                                                                   agagATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCGGTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAAAGGACGTAGAATATGTTGCATCCGGGGGGATTCGCACCTCCGACCGCTCGGGTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGggggggggtaggaaccccggtg     >  1:57156/1‑235 (MQ=18)                                                                                                                                                                                                                                     agaTGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCGGTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAAAGTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATTCGAACCCCGGATGCa   <  1:136433/251‑1 (MQ=255)                                                                                                                                                                                                                                      gaTGGTGCATCCGGGAGGATTACCCGCCTGGCGGCTCGCCCTCCGGGCCGTTGATAAAGCAACGTTATCCTCCCTGGTGCCTGCGGTTATTACCGCCACCTCTTCCATCCCTTCATCGCTGAAAGTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATTCGAACCCCGGATGCAg  <  1:14214/251‑1 (MQ=255)                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                           GTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAATTTATTTTACTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCGGTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAAAGTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATTCGAACCCCGGATGCAG  >  NC_000913/2818108‑2818587

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.